LOCUS       XM_039093616            1848 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ADAM metallopeptidase domain 2
            (Adam2), transcript variant X3, mRNA.
ACCESSION   XM_039093616
VERSION     XM_039093616.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051350.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039093616.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1848
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1848
                     /gene="Adam2"
                     /gene_synonym="Ftnb; PH-30"
                     /note="ADAM metallopeptidase domain 2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 ESTs, and 100% coverage of the annotated genomic
                     feature by RNAseq alignments, including 3 samples with
                     support for all annotated introns"
                     /db_xref="GeneID:56806"
                     /db_xref="RGD:69299"
     CDS             144..1646
                     /gene="Adam2"
                     /gene_synonym="Ftnb; PH-30"
                     /codon_start=1
                     /product="disintegrin and metalloproteinase
                     domain-containing protein 2 isoform X3"
                     /protein_id="XP_038949544.1"
                     /db_xref="GeneID:56806"
                     /db_xref="RGD:69299"
                     /translation="MDENKISTTGDANKLLYRFLKWKQSYLVLRPHDMAFLLVYRDTT
                     DYVGATYQGKMCDKNYAGGVALHPKAVTLESLAIILVQLLSLSMGVAYDDVNTCQCGV
                     PICVMNPEALHSSGVRSFSNCSMEDFSKFIASQSSHCLQNQPHLQPSYKMAVCGNGEL
                     EEGEVCDCGQEGCDDKPPPCCNPTTCQLSEGSTCSTGSCCDASCNLKAKGELCRPANQ
                     ECDVTEYCNGTSEVCEEDFFVQDGHPCAEQKWICINGTCQSGAQQCRDLFGTDADYGT
                     KECYSELNSKSDISGSCGITPTGYKDCAPNDRMCGKLICIYQSEDILKMRSAIVIYAN
                     ISGQICISLEYPPGHKESKKMWVRDGTVCGSGKVCLNQECVEDTFLNYDCTPEKCNHH
                     GVCNNKKHCHCEPTYLPPDCKNTEDTWPGGSVDSGNQQRAESIPARSYVASAYRSKSA
                     RWPFFLIIPFYVVILVLIGMLVKVYSQRKKWRMDDFSSEEQFESESESKD"
ORIGIN      
        1 gtctcgcact atctggaaat acacattgta gttgaaaagc agatgtttga gcatattggg
       61 gctgatacag ctgttgtcac tcaaaagatt ttccagttga ttggactgac aaatgcttaa
      121 ttctgtcttc cctggaattt tggatggacg aaaacaaaat ctcgaccacg ggtgatgcta
      181 acaagttgct gtacaggttc ctgaagtgga aacagtcgta cctcgttctg cgaccacatg
      241 acatggcgtt tttactcgtc tacagggaca ccactgatta tgttggcgcc acctatcaag
      301 ggaagatgtg tgacaagaac tatgcaggag gcgttgctct gcaccccaaa gccgtaactc
      361 tggaatcact tgcaattatt ttagttcagc tgctgagcct cagcatgggg gtcgcatatg
      421 acgatgtgaa cacgtgccag tgcggagtac ccatctgcgt gatgaacccc gaagcacttc
      481 attccagcgg tgtgaggtcc ttcagtaact gcagcatgga ggacttctcc aagtttatcg
      541 caagtcaaag ctcccactgt cttcagaacc agccacacct acagccgtcg tacaagatgg
      601 cagtctgtgg gaatggagag ttggaagaag gagaagtttg cgactgtgga caggagggct
      661 gtgacgataa gcctcctcca tgctgtaatc ccaccacctg tcagctgtca gagggctcca
      721 cttgctccac cggaagttgc tgcgacgctt cgtgcaatct gaaggcaaaa ggggaacttt
      781 gcaggcctgc caatcaggaa tgtgacgtca cagagtactg caacggcact tccgaagtgt
      841 gtgaagaaga cttctttgtt caagacggtc acccatgtgc agaacagaag tggatctgta
      901 ttaatggcac ctgtcagagt ggagcacagc agtgccggga tctgtttggc actgatgcag
      961 actatggtac aaaagaatgt tactcggagc tgaattccaa aagtgacata tctgggagct
     1021 gcggtatcac tcctacgggg tacaaggact gcgcacctaa tgaccggatg tgtggaaaac
     1081 taatatgtat ataccaaagt gaagacatac ttaaaatgag gtctgccatt gttatctatg
     1141 ccaatataag cgggcaaatc tgcatctccc tggaataccc cccaggtcac aaagagagca
     1201 agaagatgtg ggtgagagat ggaactgtct gcgggtcagg gaaggtttgc ttgaatcaag
     1261 agtgtgtaga agatactttc ttgaactatg attgcacccc agaaaaatgc aaccaccatg
     1321 gggtatgtaa taacaagaag cattgccact gtgagcccac atacttacct ccggattgta
     1381 aaaatacgga ggatacatgg cctggtggga gcgttgacag tggcaaccag caacgggctg
     1441 aatccatccc tgcacggtcc tatgttgcaa gtgcctaccg ctccaagtct gcaaggtggc
     1501 catttttcct gatcatccct ttctacgtgg tgatccttgt cctgatcggc atgctggtaa
     1561 aagtctattc ccaaagaaaa aaatggagaa tggatgactt ctcaagtgaa gaacaatttg
     1621 aaagtgaaag tgaatccaaa gactagtctg gacagcaaag attccagtgt catgtaattc
     1681 tcttcagtgg acagaaaaaa aagtggaaaa gaaaaaccta tgcatcatct gtttgcctga
     1741 aagtcaagcc tgcatattgt ggtttccatc tggccagaaa tcatatctct ccatacacat
     1801 gtgtgataca tatatgtgta tataattcca taaatgattt acttgtaa
//
