LOCUS       XM_039093615            2164 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ADAM metallopeptidase domain 2
            (Adam2), transcript variant X2, mRNA.
ACCESSION   XM_039093615
VERSION     XM_039093615.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051350.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039093615.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2164
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2164
                     /gene="Adam2"
                     /gene_synonym="Ftnb; PH-30"
                     /note="ADAM metallopeptidase domain 2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 ESTs, 1 Protein, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 3 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:56806"
                     /db_xref="RGD:69299"
     CDS             238..1962
                     /gene="Adam2"
                     /gene_synonym="Ftnb; PH-30"
                     /codon_start=1
                     /product="disintegrin and metalloproteinase
                     domain-containing protein 2 isoform X2"
                     /protein_id="XP_038949543.1"
                     /db_xref="GeneID:56806"
                     /db_xref="RGD:69299"
                     /translation="MDLRDPQYKIRSIKPQRTVSHYLEIHIVVEKQMFEHIGADTAVV
                     TQKIFQLIGLTNAIFAPFNLTVILSSLEFWMDENKISTTGDANKLLYRFLKWKQSYLV
                     LRPHDMAFLLVYRDTTDYVGATYQGKMCDKNYAGGVALHPKAVTLESLAIILVQLLSL
                     SMGVAYDDVNTCQCGVPICVMNPEALHSSGVRSFSNCSMEDFSKFIASQSSHCLQNQP
                     HLQPSYKMAVCGNGELEEGEVCDCGQEGCDDKPPPCCNPTTCQLSEGSTCSTGSCCDA
                     SCNLKAKGELCRPANQECDVTEYCNGTSEVCEEDFFVQDGHPCAEQKWICINGTCQSG
                     AQQCRDLFGTDADYGTKECYSELNSKSDISGSCGITPTGYKDCAPNDRMCGKLICIYQ
                     SEDILKMRSAIVIYANISGQICISLEYPPGHKESKKMWVRDGTVCGSGKVCLNQECVE
                     DTFLNYDCTPEKCNHHGVCNNKKHCHCEPTYLPPDCKNTEDTWPGGSVDSGNQQRAES
                     IPARSYVASAYRSKSARWPFFLIIPFYVVILVLIGMLVKVYSQRKKWRMDDFSSEEQF
                     ESESESKD"
ORIGIN      
        1 agcgttcttg cctcccaact ttagagtcta cagctatgac agcacaggga tcatgaggcc
       61 tcttgagcag aagtttcaga atatctgcta cttccaagga tacattgaag gggagtactt
      121 cagtttggaa acgttagcta cggaattgaa cccctggaat cttccagtgg ttttgaacat
      181 gtaatctacc aagtggaacc taagaaagga gacacattac tctatgccga gaaggatatg
      241 gatttaagag acccgcagta taagatacga agtatcaagc ctcagcgaac cgtctcgcac
      301 tatctggaaa tacacattgt agttgaaaag cagatgtttg agcatattgg ggctgataca
      361 gctgttgtca ctcaaaagat tttccagttg attggactga caaatgctat ctttgccccc
      421 tttaatctta cagtaattct gtcttccctg gaattttgga tggacgaaaa caaaatctcg
      481 accacgggtg atgctaacaa gttgctgtac aggttcctga agtggaaaca gtcgtacctc
      541 gttctgcgac cacatgacat ggcgttttta ctcgtctaca gggacaccac tgattatgtt
      601 ggcgccacct atcaagggaa gatgtgtgac aagaactatg caggaggcgt tgctctgcac
      661 cccaaagccg taactctgga atcacttgca attattttag ttcagctgct gagcctcagc
      721 atgggggtcg catatgacga tgtgaacacg tgccagtgcg gagtacccat ctgcgtgatg
      781 aaccccgaag cacttcattc cagcggtgtg aggtccttca gtaactgcag catggaggac
      841 ttctccaagt ttatcgcaag tcaaagctcc cactgtcttc agaaccagcc acacctacag
      901 ccgtcgtaca agatggcagt ctgtgggaat ggagagttgg aagaaggaga agtttgcgac
      961 tgtggacagg agggctgtga cgataagcct cctccatgct gtaatcccac cacctgtcag
     1021 ctgtcagagg gctccacttg ctccaccgga agttgctgcg acgcttcgtg caatctgaag
     1081 gcaaaagggg aactttgcag gcctgccaat caggaatgtg acgtcacaga gtactgcaac
     1141 ggcacttccg aagtgtgtga agaagacttc tttgttcaag acggtcaccc atgtgcagaa
     1201 cagaagtgga tctgtattaa tggcacctgt cagagtggag cacagcagtg ccgggatctg
     1261 tttggcactg atgcagacta tggtacaaaa gaatgttact cggagctgaa ttccaaaagt
     1321 gacatatctg ggagctgcgg tatcactcct acggggtaca aggactgcgc acctaatgac
     1381 cggatgtgtg gaaaactaat atgtatatac caaagtgaag acatacttaa aatgaggtct
     1441 gccattgtta tctatgccaa tataagcggg caaatctgca tctccctgga atacccccca
     1501 ggtcacaaag agagcaagaa gatgtgggtg agagatggaa ctgtctgcgg gtcagggaag
     1561 gtttgcttga atcaagagtg tgtagaagat actttcttga actatgattg caccccagaa
     1621 aaatgcaacc accatggggt atgtaataac aagaagcatt gccactgtga gcccacatac
     1681 ttacctccgg attgtaaaaa tacggaggat acatggcctg gtgggagcgt tgacagtggc
     1741 aaccagcaac gggctgaatc catccctgca cggtcctatg ttgcaagtgc ctaccgctcc
     1801 aagtctgcaa ggtggccatt tttcctgatc atccctttct acgtggtgat ccttgtcctg
     1861 atcggcatgc tggtaaaagt ctattcccaa agaaaaaaat ggagaatgga tgacttctca
     1921 agtgaagaac aatttgaaag tgaaagtgaa tccaaagact agtctggaca gcaaagattc
     1981 cagtgtcatg taattctctt cagtggacag aaaaaaaagt ggaaaagaaa aacctatgca
     2041 tcatctgttt gcctgaaagt caagcctgca tattgtggtt tccatctggc cagaaatcat
     2101 atctctccat acacatgtgt gatacatata tgtgtatata attccataaa tgatttactt
     2161 gtaa
//
