LOCUS       XM_039093614            2348 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ADAM metallopeptidase domain 2
            (Adam2), transcript variant X1, mRNA.
ACCESSION   XM_039093614
VERSION     XM_039093614.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051350.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039093614.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2348
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="15"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..2348
                     /gene="Adam2"
                     /gene_synonym="Ftnb; PH-30"
                     /note="ADAM metallopeptidase domain 2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 ESTs, 1 Protein, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 3 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:56806"
                     /db_xref="RGD:69299"
     CDS             89..2146
                     /gene="Adam2"
                     /gene_synonym="Ftnb; PH-30"
                     /codon_start=1
                     /product="disintegrin and metalloproteinase
                     domain-containing protein 2 isoform X1"
                     /protein_id="XP_038949542.1"
                     /db_xref="GeneID:56806"
                     /db_xref="RGD:69299"
                     /translation="MWLLLLLLSGLSRLGGLSEPQTEGTREKLHVQVTVPEKIRSVTS
                     EGYETQVTYSLKIEGKTYILNLMQKAFLPPNFRVYSYDSTGIMRPLEQKFQNICYFQG
                     YIEDTTGMCPSESSSGTIFKTSYPQRTVSHYLEIHIVVEKQMFEHIGADTAVVTQKIF
                     QLIGLTNAIFAPFNLTVILSSLEFWMDENKISTTGDANKLLYRFLKWKQSYLVLRPHD
                     MAFLLVYRDTTDYVGATYQGKMCDKNYAGGVALHPKAVTLESLAIILVQLLSLSMGVA
                     YDDVNTCQCGVPICVMNPEALHSSGVRSFSNCSMEDFSKFIASQSSHCLQNQPHLQPS
                     YKMAVCGNGELEEGEVCDCGQEGCDDKPPPCCNPTTCQLSEGSTCSTGSCCDASCNLK
                     AKGELCRPANQECDVTEYCNGTSEVCEEDFFVQDGHPCAEQKWICINGTCQSGAQQCR
                     DLFGTDADYGTKECYSELNSKSDISGSCGITPTGYKDCAPNDRMCGKLICIYQSEDIL
                     KMRSAIVIYANISGQICISLEYPPGHKESKKMWVRDGTVCGSGKVCLNQECVEDTFLN
                     YDCTPEKCNHHGVCNNKKHCHCEPTYLPPDCKNTEDTWPGGSVDSGNQQRAESIPARS
                     YVASAYRSKSARWPFFLIIPFYVVILVLIGMLVKVYSQRKKWRMDDFSSEEQFESESE
                     SKD"
ORIGIN      
        1 gctgcccaca gccctcacct cgcgccccca actgccctgt agagagccaa ctgccattcc
       61 ccggggctgg ggtccaggag gccaggccat gtggctcctc ttgcttctgc tgagtgggct
      121 gagtagactt ggagggctta gcgagcccca aacagaaggc actcgtgaga aattacacgt
      181 gcaagtcacg gtgccagaga aaatccggtc cgtcacaagt gaaggctacg aaacacaggt
      241 gacctacagt ctcaaaatcg aagggaaaac atacatcctg aacctaatgc aaaaagcgtt
      301 cttgcctccc aactttagag tctacagcta tgacagcaca gggatcatga ggcctcttga
      361 gcagaagttt cagaatatct gctacttcca aggatacatt gaagatacca cagggatgtg
      421 tccatcagaa agctcatctg gcacaatctt taaaactagt tatcctcagc gaaccgtctc
      481 gcactatctg gaaatacaca ttgtagttga aaagcagatg tttgagcata ttggggctga
      541 tacagctgtt gtcactcaaa agattttcca gttgattgga ctgacaaatg ctatctttgc
      601 cccctttaat cttacagtaa ttctgtcttc cctggaattt tggatggacg aaaacaaaat
      661 ctcgaccacg ggtgatgcta acaagttgct gtacaggttc ctgaagtgga aacagtcgta
      721 cctcgttctg cgaccacatg acatggcgtt tttactcgtc tacagggaca ccactgatta
      781 tgttggcgcc acctatcaag ggaagatgtg tgacaagaac tatgcaggag gcgttgctct
      841 gcaccccaaa gccgtaactc tggaatcact tgcaattatt ttagttcagc tgctgagcct
      901 cagcatgggg gtcgcatatg acgatgtgaa cacgtgccag tgcggagtac ccatctgcgt
      961 gatgaacccc gaagcacttc attccagcgg tgtgaggtcc ttcagtaact gcagcatgga
     1021 ggacttctcc aagtttatcg caagtcaaag ctcccactgt cttcagaacc agccacacct
     1081 acagccgtcg tacaagatgg cagtctgtgg gaatggagag ttggaagaag gagaagtttg
     1141 cgactgtgga caggagggct gtgacgataa gcctcctcca tgctgtaatc ccaccacctg
     1201 tcagctgtca gagggctcca cttgctccac cggaagttgc tgcgacgctt cgtgcaatct
     1261 gaaggcaaaa ggggaacttt gcaggcctgc caatcaggaa tgtgacgtca cagagtactg
     1321 caacggcact tccgaagtgt gtgaagaaga cttctttgtt caagacggtc acccatgtgc
     1381 agaacagaag tggatctgta ttaatggcac ctgtcagagt ggagcacagc agtgccggga
     1441 tctgtttggc actgatgcag actatggtac aaaagaatgt tactcggagc tgaattccaa
     1501 aagtgacata tctgggagct gcggtatcac tcctacgggg tacaaggact gcgcacctaa
     1561 tgaccggatg tgtggaaaac taatatgtat ataccaaagt gaagacatac ttaaaatgag
     1621 gtctgccatt gttatctatg ccaatataag cgggcaaatc tgcatctccc tggaataccc
     1681 cccaggtcac aaagagagca agaagatgtg ggtgagagat ggaactgtct gcgggtcagg
     1741 gaaggtttgc ttgaatcaag agtgtgtaga agatactttc ttgaactatg attgcacccc
     1801 agaaaaatgc aaccaccatg gggtatgtaa taacaagaag cattgccact gtgagcccac
     1861 atacttacct ccggattgta aaaatacgga ggatacatgg cctggtggga gcgttgacag
     1921 tggcaaccag caacgggctg aatccatccc tgcacggtcc tatgttgcaa gtgcctaccg
     1981 ctccaagtct gcaaggtggc catttttcct gatcatccct ttctacgtgg tgatccttgt
     2041 cctgatcggc atgctggtaa aagtctattc ccaaagaaaa aaatggagaa tggatgactt
     2101 ctcaagtgaa gaacaatttg aaagtgaaag tgaatccaaa gactagtctg gacagcaaag
     2161 attccagtgt catgtaattc tcttcagtgg acagaaaaaa aagtggaaaa gaaaaaccta
     2221 tgcatcatct gtttgcctga aagtcaagcc tgcatattgt ggtttccatc tggccagaaa
     2281 tcatatctct ccatacacat gtgtgataca tatatgtgta tataattcca taaatgattt
     2341 acttgtaa
//
