LOCUS       XM_039085917            4922 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ADAM metallopeptidase domain 19
            (Adam19), transcript variant X4, mRNA.
ACCESSION   XM_039085917
VERSION     XM_039085917.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039085917.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4922
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4922
                     /gene="Adam19"
                     /gene_synonym="Sox30"
                     /note="ADAM metallopeptidase domain 19; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 47 ESTs, 13 long SRA reads, 2 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 43 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:303068"
                     /db_xref="RGD:1585017"
     CDS             131..1489
                     /gene="Adam19"
                     /gene_synonym="Sox30"
                     /codon_start=1
                     /product="disintegrin and metalloproteinase
                     domain-containing protein 19 isoform X3"
                     /protein_id="XP_038941845.1"
                     /db_xref="GeneID:303068"
                     /db_xref="RGD:1585017"
                     /translation="MAPGTQCREQVRQCDLPEFCTGKSPHCPTNYYQMDGTPCEGGQA
                     YCYNGMCLTYQEQCQQLWGPGARPALDLCFERVNAAGDTYGNCGKGLNGKYRKCSPRD
                     AKCGKIQCQSTQARPLESNAVSIDTTITLNGRRIHCRGTHVYRGPEEEEGEGDMLDPG
                     LVMTGTKCGHNHICFEGQCRNTSFFETEGCGKKCNGHGVCNNNKNCHCFPGWAPPFCN
                     TPGDGGSIDSGPLPPKSAGPVIAGVFSALFVLAVLVLLCHCYRQSHKLGKPSALPFKL
                     RQQFSCPFRVSQNGGTGHANPTFKLQTPQGKRKVTNTPETLRKPSHPPPRPPPDYLRV
                     ESHPAPLPAHLNRAAGSSPEAGAQIERKESARRPPPSRPMPPAPNCLLSQDFSRPRPP
                     QKALPANPVPGQRTVPRPGGTSLFHPPTTGPQPPRPPAVSVPKLPEYRSQRIGGITSS
                     KI"
ORIGIN      
        1 ggaggccgga ggtgtggcaa tgggtacctg gaagacggtg aagaatgtga ctgcggagaa
       61 gaggacgaat gtaagaaccc ttgctgcaat gcctccaact gcactctgaa ggaaggggcc
      121 gagtgtgccc atggctcctg gaacccagtg tcgtgagcag gtgcggcagt gtgatctccc
      181 cgagttctgc acgggcaagt ccccccactg ccccaccaac tattaccaga tggatggcac
      241 cccctgcgag ggtggccagg cctactgcta caatggcatg tgcctcactt atcaggagca
      301 gtgccagcag ctgtggggac ctggagccag gcctgctctt gatctttgct tcgagagggt
      361 gaatgctgct ggtgacacct atggtaactg cggcaaaggc ttgaatggca aatacaggaa
      421 gtgcagcccc agggatgcca agtgtgggaa gatccagtgt cagagcaccc aggccaggcc
      481 cctggaatcc aacgcagtat ctattgacac caccattacc ttgaacggga ggcggatcca
      541 ctgtcggggc acccatgtct accggggtcc tgaggaggaa gaaggggagg gtgacatgct
      601 ggacccaggg ctggtgatga ccgggaccaa gtgtggccac aaccatattt gcttcgaggg
      661 gcaatgcagg aacacctcct tctttgagac ggaaggctgt gggaaaaagt gcaatggtca
      721 tggggtctgc aacaacaaca agaactgtca ttgcttccct ggctgggctc cacctttctg
      781 taacacccca ggagatggcg gcagcattga cagtgggcct ttgcccccta agagtgcggg
      841 tcctgtgatt gctggggtgt tttctgccct cttcgtgttg gcagtcctgg tgctattgtg
      901 tcattgctac agacagagcc acaaactggg caagccctca gctctccctt ttaagctgcg
      961 gcaacagttc agttgtccct tcagggtgtc tcagaatggt ggaactggcc acgccaaccc
     1021 aactttcaag ttgcagacac cccagggcaa gcgaaaggtg actaacaccc ctgaaactct
     1081 ccggaagccc tcccaccctc ctccccggcc ccctccggac tacctacgag ttgaatccca
     1141 tcctgcacca ctgccagcac atctgaacag ggctgctggg agctcaccag aagctggagc
     1201 tcagatagaa agaaaggaat cagccagaag acctccccca agccggccca tgccccctgc
     1261 accgaactgc ctactgtccc aggatttctc caggcctcga ccacctcaga aggcactccc
     1321 agcgaatcct gtgccgggcc aaaggactgt tcccaggcca ggaggcacct ccctgtttca
     1381 tccccctact actggtcctc agcctcccag gcctccagca gtgtctgttc caaagcttcc
     1441 tgagtaccga tcacagagga ttggagggat aaccagctcc aagatctaga cgtgtctaga
     1501 agtttcttgt ttcgcttgaa gactccggat gccatggaag gtccagaagg aagaagcctg
     1561 cttggccacc ctgaagcttc tgcagccttc tggaacccac ctcatcccca gaatctccct
     1621 tcttgcccta gtgcctcctg cttcctctga gacccagagg gtctcatagc cgatggcttc
     1681 taagtgttgt cctgtgcaat atacagtccg ggtaggaaag ggaaacatgt ggaggaggtt
     1741 tggggaagat tctccctcag cccgctagcc aagagctacc aacaatgttc agggaagtct
     1801 tgagctgggg tcctcctgtg ccgagcttgg agaaggtatc catctgggtc ctctgctggc
     1861 aggtacacac aggagcttca gtgattggcc tcccaggctg ggccttactg tctcttagct
     1921 tttatggccc gaggaagctg catccctgcc ccaaggcttg gtcaaggtgc ctgttcccgg
     1981 ctatgtggct gcatgtgaca agccatgctc cctcaccccc cgccattctt cacattccca
     2041 ctcccatatt tacatgggtc actctgactc agacaggtac tatttgtaag tagtgtagac
     2101 agcagggggg agcggtcagc ctgtgtcccc tctgagccgt gatgccaaag gttgctaagg
     2161 acttttagaa tccccagccg tacatcccag tgttccatgt gtccccttct cctcctcttt
     2221 cagcatccct agcctatggt gctttggtgg tggaccactg cagtcctgac ttgctggtga
     2281 ctatatgcta gtgacctcca aatcaggatc ctgcctcatg gggtagccac tggactttct
     2341 gcactggatc gcaagagcat tgagccgagt gggcgtgtgt gtgtgtgtgt gtgtgtgtga
     2401 cagagacagt gagagagaga caggcaggca gacagacaga cagacagctc tgcgtgtact
     2461 tgtattttat ggcctcaaac aggataaggg gcctccttcc ttattcctga cctatatcta
     2521 agtaaggttc tccaggacag ccacagttat actgaggggg gactgacatg tttggaatcc
     2581 tggctattag taacgtctat gcaggggcac cagcccctcc ctggtggtca gctctgaggt
     2641 gagattgttg actatgaaca gatcacagtt gacagtcaca gttaactctc ttcaaccaag
     2701 cacttccatc agttctctcc tggttactgc tcctatgtga ttgtcttgga agatgctggg
     2761 aggtgggaat gggactggca tggacctcct cttgcttggt gctctgcctc ctagaacagt
     2821 tttcacacat ttgccaggcc tggcctcgaa gaggccatct tccaccccca aaaaaggtgc
     2881 taatagcact ccagagggct ctctaggggc cttcctgcca accgtggcga gcggttgtta
     2941 gctcttggaa ccctccagag gaagaggcaa gcttttgact ccccattacc accccgaggc
     3001 ctccttctat ctcctcacag agacaagtga gagatacagc atacatggct ggcgggtaga
     3061 aagatctcag gaaaacatct cttttctttt cagggtaact gtgccgttca cactctctga
     3121 gtgtgatcca aaatcttact taaggccttg gtccatctcc tgtgtcagtg tctcatttct
     3181 gtgctttacc agatgcccag taactacagc ttgggcccta gagacagagg ccaccccgat
     3241 tctcaccaca aagttagaaa ccctccactt tctttccctt gagccacatc agaaaaaaga
     3301 cccatttcct tgctcattgg caatcacttc ggcttttttc tctttcgtta ctctcgtacc
     3361 acctccatcc cataaaacta tactgtgaac cgtaagaggg caggattttt taactcggta
     3421 gaaatgctgg cagctactct ccaaaagcca gggaggctgt cacaggtagg aatcccttcc
     3481 cgtctgcatt gtgaagggtc ccgtacaggt gtacctaggc ttcaaagaca gggctcgtcc
     3541 caaaggattg tcacttagga gatgaaagaa tattaccaca tggggaggag ggggcgcttg
     3601 caacagaaca ctttggtcta cctacaccaa gtctgtgagg gcatgcaaga ctgaaaaggc
     3661 cttttcttat gcatagaaag tgagcaagac tagaaataac tgtccaaggc gtctctgttc
     3721 ctggccactg aagagagatg tcagaaggcg ttggaatagg tcgaagccaa ggctccagtg
     3781 ggctgaggga aggtttggag ctggatttcg tggtgtacac ctttagtccc aggagaggta
     3841 ggtgaatctc ttgagtatga gggtagcctg gtctaaaaag gaagttccag gacagccagg
     3901 gccacaccga gaaaaaaaaa atcaactcta caaaaacaag taaaaattaa gacaggatct
     3961 caagtatcct aggttggcct tcaagtcact tcaaaagtag agaaagaaaa ctgagggtga
     4021 cctttgaact cctgagtgct ggcttcttcc cgcgtgctca gactgccagt gtgtgctacc
     4081 atgcttcatg tggtcctggg ttcaaacaca gaccttcatg tgtctatagg caaccaccct
     4141 accaactgat ctacatccct cagccacagc ccctgccaac cttagaactg caaagccatt
     4201 tctgacctgt aaacctcagc tcccaatctc tgtaagatgt gtagccttgg ctaatccctt
     4261 ccacattgca actccctgct tgcttcctat tccttctagc cttggtgact tccacccgta
     4321 agagaaaagc cccttttaac ccctgctcca aaacattgta gatgttaggg tctggatgct
     4381 ctctgcaatt caacagtccc ttctgttgca gtagctccct gccacgctcc agtaatcctt
     4441 cagtgtctcc tctgggctca atgaatttgc ttatttgaca aagtgggcgt gagacttgta
     4501 ttcttaaaat tggaggttag tcattttgtc aaatgcgtgt catgacagac ccaaaaggac
     4561 tccacacaca agccagggac accaactgga aaggtgcccc tctcccaggg aagcctgcta
     4621 gggagaggtt ctgtagaacc caagcccagc agcccaaagt catgcaccca gtgtcctctt
     4681 gtatgactgt gtatatgtct gtctgggatc cagggcaaat gtgaattttc ttttgattcg
     4741 ggagattgtt cacaggaaat agtcctctcc tctcatgtcc tcctattgat tgtttacaat
     4801 atttgtacat ctatgcaaaa tacttgaatg ggccgtggtg ccttgttttg ttttttcttg
     4861 ttttttgttt ttttttttcc tccttgtttg tatttaatta aaacaaattg tcattaggaa
     4921 at
//
