LOCUS       XM_039085915            6190 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ADAM metallopeptidase domain 19
            (Adam19), transcript variant X1, mRNA.
ACCESSION   XM_039085915
VERSION     XM_039085915.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039085915.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6190
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..6190
                     /gene="Adam19"
                     /gene_synonym="Sox30"
                     /note="ADAM metallopeptidase domain 19; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 48 ESTs, 14 long SRA reads, 14 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 10 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:303068"
                     /db_xref="RGD:1585017"
     CDS             157..2757
                     /gene="Adam19"
                     /gene_synonym="Sox30"
                     /codon_start=1
                     /product="disintegrin and metalloproteinase
                     domain-containing protein 19 isoform X1"
                     /protein_id="XP_038941843.1"
                     /db_xref="GeneID:303068"
                     /db_xref="RGD:1585017"
                     /translation="MAKVPNSAAFKCFPGQPLLICILRERLAPAGHLFAPAYTETCYT
                     ASGNPQTTTLKSEDHCFYHGTVRKVDESSVTLSTCRGIRGLIIVRSNLSYIIEPVPNS
                     DNQHRIYRSEHLKLPPGNCGFEHSRPTSKDWTLQFTHQTKKQPRRMKREDLHSMKYVE
                     LYLVADYAEFQKNRHDQDATKHKLMEIANYVDKFYRSLSIRIALVGLEVWTHGDKCEV
                     SENPYSTLWSFLSWRRKLLTQKSHDNAQLITGRSFQGTTIGLAPLMAMCSVYQSGGVS
                     MDHSENAIGVASTVAHEIGHNFGMSHDSAHCCSTSAADGGCIMAAATGHPFPKVFSSC
                     NRKELDRYLQSGGGMCLSNMPDTRTLYGGRRCGNGYLEDGEECDCGEEDECKNPCCNA
                     SNCTLKEGAECAHGSCCHQCKLVAPGTQCREQVRQCDLPEFCTGKSPHCPTNYYQMDG
                     TPCEGGQAYCYNGMCLTYQEQCQQLWGPGARPALDLCFERVNAAGDTYGNCGKGLNGK
                     YRKCSPRDAKCGKIQCQSTQARPLESNAVSIDTTITLNGRRIHCRGTHVYRGPEEEEG
                     EGDMLDPGLVMTGTKCGHNHICFEGQCRNTSFFETEGCGKKCNGHGVCNNNKNCHCFP
                     GWAPPFCNTPGDGGSIDSGPLPPKSAGPVIAGVFSALFVLAVLVLLCHCYRQSHKLGK
                     PSALPFKLRQQFSCPFRVSQNGGTGHANPTFKLQTPQGKRKVTNTPETLRKPSHPPPR
                     PPPDYLRVESHPAPLPAHLNRAAGSSPEAGAQIERKESARRPPPSRPMPPAPNCLLSQ
                     DFSRPRPPQKALPANPVPGQRTVPRPGGTSLFHPPTTGPQPPRPPAVSVPKLPEYRSQ
                     RIGGITSSKI"
ORIGIN      
        1 atccccaacc cctcatagtt ttataaatac aagaaaatgg aagttggctt tcataccagt
       61 tctaaaaaga aggaaggcag gttgtgaaat tcggcctgag tttctaggga ctttctggta
      121 aaacctgcct tcacaaggcc tgtcagctcc tccccgatgg ctaaggttcc taactcagct
      181 gctttcaagt gctttcctgg acaacctctt ctgatctgca tcctgagaga gaggctggcc
      241 cccgctgggc acctttttgc tccagcctac acagagacct gctacaccgc aagtggcaat
      301 cctcagacca ccacgctgaa atctgaggat cactgctttt accacgggac tgtgaggaaa
      361 gtggatgagt ccagcgtcac tctcagcacc tgccggggaa ttagaggact gattatagtg
      421 agaagtaacc tcagctacat catcgagccc gtccctaaca gcgacaacca acaccgtatt
      481 tacagatccg aacatctcaa gctgcccccg gggaactgtg ggttcgagca ctccaggccc
      541 acctctaagg actggaccct tcagtttaca catcagacca aaaagcaacc tcgcagaatg
      601 aaacgggaag atttacactc tatgaagtac gtggagcttt atctggtggc tgattacgca
      661 gagtttcaga agaaccggca tgaccaggat gccaccaaac acaagctcat ggagattgcc
      721 aactatgttg ataagtttta ccgctccctg agcatccgga ttgcgcttgt cggcttggag
      781 gtgtggacac acggggataa gtgtgaagtc tcagagaatc cgtactctac cctctggtcc
      841 tttctcagtt ggaggcgcaa gctgctcacc cagaagagcc atgacaatgc ccagctaatc
      901 acgggcaggt ccttccaagg caccaccatt ggcctggccc ccctcatggc catgtgttct
      961 gtgtaccagt ccggaggagt tagcatggac cactccgaga atgccatcgg tgtagcctcc
     1021 accgtggccc acgagattgg ccacaacttt ggcatgagcc atgattctgc acactgctgt
     1081 tctaccagcg cagccgatgg tgggtgcatc atggctgctg ctacggggca ccctttcccc
     1141 aaagtgttca gttcgtgcaa caggaaggag ctggacaggt atctgcagtc aggaggtggg
     1201 atgtgtctct ccaacatgcc agatacgagg actctgtatg gaggccggag gtgtggcaat
     1261 gggtacctgg aagacggtga agaatgtgac tgcggagaag aggacgaatg taagaaccct
     1321 tgctgcaatg cctccaactg cactctgaag gaaggggccg agtgtgccca tggctcctgc
     1381 tgccaccagt gtaagctggt ggctcctgga acccagtgtc gtgagcaggt gcggcagtgt
     1441 gatctccccg agttctgcac gggcaagtcc ccccactgcc ccaccaacta ttaccagatg
     1501 gatggcaccc cctgcgaggg tggccaggcc tactgctaca atggcatgtg cctcacttat
     1561 caggagcagt gccagcagct gtggggacct ggagccaggc ctgctcttga tctttgcttc
     1621 gagagggtga atgctgctgg tgacacctat ggtaactgcg gcaaaggctt gaatggcaaa
     1681 tacaggaagt gcagccccag ggatgccaag tgtgggaaga tccagtgtca gagcacccag
     1741 gccaggcccc tggaatccaa cgcagtatct attgacacca ccattacctt gaacgggagg
     1801 cggatccact gtcggggcac ccatgtctac cggggtcctg aggaggaaga aggggagggt
     1861 gacatgctgg acccagggct ggtgatgacc gggaccaagt gtggccacaa ccatatttgc
     1921 ttcgaggggc aatgcaggaa cacctccttc tttgagacgg aaggctgtgg gaaaaagtgc
     1981 aatggtcatg gggtctgcaa caacaacaag aactgtcatt gcttccctgg ctgggctcca
     2041 cctttctgta acaccccagg agatggcggc agcattgaca gtgggccttt gccccctaag
     2101 agtgcgggtc ctgtgattgc tggggtgttt tctgccctct tcgtgttggc agtcctggtg
     2161 ctattgtgtc attgctacag acagagccac aaactgggca agccctcagc tctccctttt
     2221 aagctgcggc aacagttcag ttgtcccttc agggtgtctc agaatggtgg aactggccac
     2281 gccaacccaa ctttcaagtt gcagacaccc cagggcaagc gaaaggtgac taacacccct
     2341 gaaactctcc ggaagccctc ccaccctcct ccccggcccc ctccggacta cctacgagtt
     2401 gaatcccatc ctgcaccact gccagcacat ctgaacaggg ctgctgggag ctcaccagaa
     2461 gctggagctc agatagaaag aaaggaatca gccagaagac ctcccccaag ccggcccatg
     2521 ccccctgcac cgaactgcct actgtcccag gatttctcca ggcctcgacc acctcagaag
     2581 gcactcccag cgaatcctgt gccgggccaa aggactgttc ccaggccagg aggcacctcc
     2641 ctgtttcatc cccctactac tggtcctcag cctcccaggc ctccagcagt gtctgttcca
     2701 aagcttcctg agtaccgatc acagaggatt ggagggataa ccagctccaa gatctagacg
     2761 tgtctagaag tttcttgttt cgcttgaaga ctccggatgc catggaaggt ccagaaggaa
     2821 gaagcctgct tggccaccct gaagcttctg cagccttctg gaacccacct catccccaga
     2881 atctcccttc ttgccctagt gcctcctgct tcctctgaga cccagagggt ctcatagccg
     2941 atggcttcta agtgttgtcc tgtgcaatat acagtccggg taggaaaggg aaacatgtgg
     3001 aggaggtttg gggaagattc tccctcagcc cgctagccaa gagctaccaa caatgttcag
     3061 ggaagtcttg agctggggtc ctcctgtgcc gagcttggag aaggtatcca tctgggtcct
     3121 ctgctggcag gtacacacag gagcttcagt gattggcctc ccaggctggg ccttactgtc
     3181 tcttagcttt tatggcccga ggaagctgca tccctgcccc aaggcttggt caaggtgcct
     3241 gttcccggct atgtggctgc atgtgacaag ccatgctccc tcaccccccg ccattcttca
     3301 cattcccact cccatattta catgggtcac tctgactcag acaggtacta tttgtaagta
     3361 gtgtagacag caggggggag cggtcagcct gtgtcccctc tgagccgtga tgccaaaggt
     3421 tgctaaggac ttttagaatc cccagccgta catcccagtg ttccatgtgt ccccttctcc
     3481 tcctctttca gcatccctag cctatggtgc tttggtggtg gaccactgca gtcctgactt
     3541 gctggtgact atatgctagt gacctccaaa tcaggatcct gcctcatggg gtagccactg
     3601 gactttctgc actggatcgc aagagcattg agccgagtgg gcgtgtgtgt gtgtgtgtgt
     3661 gtgtgtgaca gagacagtga gagagagaca ggcaggcaga cagacagaca gacagctctg
     3721 cgtgtacttg tattttatgg cctcaaacag gataaggggc ctccttcctt attcctgacc
     3781 tatatctaag taaggttctc caggacagcc acagttatac tgagggggga ctgacatgtt
     3841 tggaatcctg gctattagta acgtctatgc aggggcacca gcccctccct ggtggtcagc
     3901 tctgaggtga gattgttgac tatgaacaga tcacagttga cagtcacagt taactctctt
     3961 caaccaagca cttccatcag ttctctcctg gttactgctc ctatgtgatt gtcttggaag
     4021 atgctgggag gtgggaatgg gactggcatg gacctcctct tgcttggtgc tctgcctcct
     4081 agaacagttt tcacacattt gccaggcctg gcctcgaaga ggccatcttc cacccccaaa
     4141 aaaggtgcta atagcactcc agagggctct ctaggggcct tcctgccaac cgtggcgagc
     4201 ggttgttagc tcttggaacc ctccagagga agaggcaagc ttttgactcc ccattaccac
     4261 cccgaggcct ccttctatct cctcacagag acaagtgaga gatacagcat acatggctgg
     4321 cgggtagaaa gatctcagga aaacatctct tttcttttca gggtaactgt gccgttcaca
     4381 ctctctgagt gtgatccaaa atcttactta aggccttggt ccatctcctg tgtcagtgtc
     4441 tcatttctgt gctttaccag atgcccagta actacagctt gggccctaga gacagaggcc
     4501 accccgattc tcaccacaaa gttagaaacc ctccactttc tttcccttga gccacatcag
     4561 aaaaaagacc catttccttg ctcattggca atcacttcgg cttttttctc tttcgttact
     4621 ctcgtaccac ctccatccca taaaactata ctgtgaaccg taagagggca ggatttttta
     4681 actcggtaga aatgctggca gctactctcc aaaagccagg gaggctgtca caggtaggaa
     4741 tcccttcccg tctgcattgt gaagggtccc gtacaggtgt acctaggctt caaagacagg
     4801 gctcgtccca aaggattgtc acttaggaga tgaaagaata ttaccacatg gggaggaggg
     4861 ggcgcttgca acagaacact ttggtctacc tacaccaagt ctgtgagggc atgcaagact
     4921 gaaaaggcct tttcttatgc atagaaagtg agcaagacta gaaataactg tccaaggcgt
     4981 ctctgttcct ggccactgaa gagagatgtc agaaggcgtt ggaataggtc gaagccaagg
     5041 ctccagtggg ctgagggaag gtttggagct ggatttcgtg gtgtacacct ttagtcccag
     5101 gagaggtagg tgaatctctt gagtatgagg gtagcctggt ctaaaaagga agttccagga
     5161 cagccagggc cacaccgaga aaaaaaaaat caactctaca aaaacaagta aaaattaaga
     5221 caggatctca agtatcctag gttggccttc aagtcacttc aaaagtagag aaagaaaact
     5281 gagggtgacc tttgaactcc tgagtgctgg cttcttcccg cgtgctcaga ctgccagtgt
     5341 gtgctaccat gcttcatgtg gtcctgggtt caaacacaga ccttcatgtg tctataggca
     5401 accaccctac caactgatct acatccctca gccacagccc ctgccaacct tagaactgca
     5461 aagccatttc tgacctgtaa acctcagctc ccaatctctg taagatgtgt agccttggct
     5521 aatcccttcc acattgcaac tccctgcttg cttcctattc cttctagcct tggtgacttc
     5581 cacccgtaag agaaaagccc cttttaaccc ctgctccaaa acattgtaga tgttagggtc
     5641 tggatgctct ctgcaattca acagtccctt ctgttgcagt agctccctgc cacgctccag
     5701 taatccttca gtgtctcctc tgggctcaat gaatttgctt atttgacaaa gtgggcgtga
     5761 gacttgtatt cttaaaattg gaggttagtc attttgtcaa atgcgtgtca tgacagaccc
     5821 aaaaggactc cacacacaag ccagggacac caactggaaa ggtgcccctc tcccagggaa
     5881 gcctgctagg gagaggttct gtagaaccca agcccagcag cccaaagtca tgcacccagt
     5941 gtcctcttgt atgactgtgt atatgtctgt ctgggatcca gggcaaatgt gaattttctt
     6001 ttgattcggg agattgttca caggaaatag tcctctcctc tcatgtcctc ctattgattg
     6061 tttacaatat ttgtacatct atgcaaaata cttgaatggg ccgtggtgcc ttgttttgtt
     6121 ttttcttgtt ttttgttttt ttttttcctc cttgtttgta tttaattaaa acaaattgtc
     6181 attaggaaat
//
