LOCUS       NM_001199167             588 bp    mRNA    linear   ROD 29-MAR-2024
DEFINITION  Rattus norvegicus acylphosphatase 1 (Acyp1), transcript variant 2,
            mRNA.
ACCESSION   NM_001199167
VERSION     NM_001199167.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 588)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000006.1.
            
            Transcript Variant: This variant (2) differs in the 5' UTR compared
            to variant 1. Variants 1, 2 and 3 encode the same protein.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CK842246.1, BF559555.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN16676784, SAMN16676810
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-82                JAXUCZ010000006.1  110657077-110657158 c
            83-174              JAXUCZ010000006.1  110656745-110656836 c
            175-588             JAXUCZ010000006.1  110650213-110650626 c
FEATURES             Location/Qualifiers
     source          1..588
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q31"
     gene            1..588
                     /gene="Acyp1"
                     /note="acylphosphatase 1"
                     /db_xref="GeneID:299203"
                     /db_xref="RGD:1311327"
     exon            1..82
                     /gene="Acyp1"
                     /inference="alignment:Splign:2.1.0"
     exon            83..174
                     /gene="Acyp1"
                     /inference="alignment:Splign:2.1.0"
     CDS             91..390
                     /gene="Acyp1"
                     /EC_number="3.6.1.7"
                     /note="acylphosphatase 1, erythrocyte (common) type"
                     /codon_start=1
                     /product="acylphosphatase-1"
                     /protein_id="NP_001186096.1"
                     /db_xref="GeneID:299203"
                     /db_xref="RGD:1311327"
                     /translation="MAEGDTLVSVDYEIFGKVQGVFFRKYTQAEGKKLGLVGWVQNTN
                     RGTVQGQLQGPVSKVRFMQEWLEKRGSPKSHIDRANFNNEKIISNLDYSDFQIIK"
     exon            175..588
                     /gene="Acyp1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctaaaggtct tcttcggggc tgtacagcgg ctagtgggga agccccggaa actcgagtgt
       61 ccgccgctcg gatcatccaa gtgtttgagc atggcagaag gggacacctt ggtctcagtg
      121 gattacgaaa tttttggaaa ggttcaaggg gtgtttttcc gcaagtacac tcaggctgag
      181 ggcaaaaagc taggtttggt gggctgggtt cagaacacca acaggggcac ggtgcaagga
      241 caactgcaag gccccgtctc caaggtccgc tttatgcagg agtggctgga gaaaagagga
      301 agtcccaaat ctcacatcga ccgagcaaac ttcaacaatg agaaaatcat ctcaaacttg
      361 gattattcag acttccaaat tataaaataa tgacacgaat tttaattttt tcaaagtaat
      421 ctcactcctt tttttatcgg tatatataaa atagaacgat tctgtgctca gtattagaat
      481 ttgttagtaa gttattttag ttgcatgttt gaaagttacc aggtattaca tgtatgacga
      541 aagacaaatg tgtacagttc taaccaataa aaacacatta gaacctca
//
