LOCUS       NM_001191860            1498 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus actin related protein 3B (Actr3b), mRNA.
ACCESSION   NM_001191860 XM_342611
VERSION     NM_001191860.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1498)
  AUTHORS   Principe,S., Jones,E.E., Kim,Y., Sinha,A., Nyalwidhe,J.O.,
            Brooks,J., Semmes,O.J., Troyer,D.A., Lance,R.S., Kislinger,T. and
            Drake,R.R.
  TITLE     In-depth proteomic analyses of exosomes isolated from expressed
            prostatic secretions in urine
  JOURNAL   Proteomics 13 (10-11), 1667-1671 (2013)
   PUBMED   23533145
REFERENCE   2  (bases 1 to 1498)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000004.1.
            
            On Jul 17, 2010 this sequence version replaced XM_342611.4.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643429.15076.1,
                                           SRR26643299.17806.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA5760383,
                                           SAMEA5760386 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-107               JAXUCZ010000004.1  10089256-10089362   c
            108-163             JAXUCZ010000004.1  10050609-10050664   c
            164-288             JAXUCZ010000004.1  10039941-10040065   c
            289-399             JAXUCZ010000004.1  10038426-10038536   c
            400-495             JAXUCZ010000004.1  10024583-10024678   c
            496-603             JAXUCZ010000004.1  10023859-10023966   c
            604-747             JAXUCZ010000004.1  10019566-10019709   c
            748-921             JAXUCZ010000004.1  10016818-10016991   c
            922-1014            JAXUCZ010000004.1  10016028-10016120   c
            1015-1140           JAXUCZ010000004.1  9997608-9997733     c
            1141-1224           JAXUCZ010000004.1  9996925-9997008     c
            1225-1498           JAXUCZ010000004.1  9996155-9996428     c
FEATURES             Location/Qualifiers
     source          1..1498
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /map="4q11"
     gene            1..1498
                     /gene="Actr3b"
                     /gene_synonym="RGD1565759"
                     /note="actin related protein 3B"
                     /db_xref="GeneID:362298"
                     /db_xref="RGD:1565759"
     exon            1..107
                     /gene="Actr3b"
                     /gene_synonym="RGD1565759"
                     /inference="alignment:Splign:2.1.0"
     CDS             64..1320
                     /gene="Actr3b"
                     /gene_synonym="RGD1565759"
                     /note="ARP3 actin related protein 3 homolog B;
                     actin-related protein 3B-like"
                     /codon_start=1
                     /product="actin-related protein 3B"
                     /protein_id="NP_001178789.1"
                     /db_xref="GeneID:362298"
                     /db_xref="RGD:1565759"
                     /translation="MAGSLPPCVVDCGTGYTKLGYAGNTEPQFIIPSCIAIRESAKVV
                     DQAQRRVLRGVDDLDFFIGDEAIDKPTYATKWPIRHGIVEDWDLMERFMEQVVFKYLR
                     AEPEDHYFLMTEPPLNTPENREYLAEIMFESFNVPGLYIAVQAVLALAASWTSRQVGE
                     RTLTGIVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLREREVGIPPE
                     QSLETAKAIKEKYCYICPDIVKEFAKYDVDPRKWIKQYTGINAINQRKFIIDVGYERF
                     LGPEIFFHPEFANPDFMESISDVVDEVIQNCPIDVRRPLYKNIVLSGGSTMFRDFGRR
                     LQRDLKRVVDARLKLSQELSGGRIKPKPVEVQVITHHMQRYAVWFGGSMLASTPEFFQ
                     VCHTKKDYEEYGPSICRHNPVFGVMS"
     exon            108..163
                     /gene="Actr3b"
                     /gene_synonym="RGD1565759"
                     /inference="alignment:Splign:2.1.0"
     exon            164..288
                     /gene="Actr3b"
                     /gene_synonym="RGD1565759"
                     /inference="alignment:Splign:2.1.0"
     exon            289..399
                     /gene="Actr3b"
                     /gene_synonym="RGD1565759"
                     /inference="alignment:Splign:2.1.0"
     exon            400..495
                     /gene="Actr3b"
                     /gene_synonym="RGD1565759"
                     /inference="alignment:Splign:2.1.0"
     exon            496..603
                     /gene="Actr3b"
                     /gene_synonym="RGD1565759"
                     /inference="alignment:Splign:2.1.0"
     exon            604..747
                     /gene="Actr3b"
                     /gene_synonym="RGD1565759"
                     /inference="alignment:Splign:2.1.0"
     exon            748..921
                     /gene="Actr3b"
                     /gene_synonym="RGD1565759"
                     /inference="alignment:Splign:2.1.0"
     exon            922..1014
                     /gene="Actr3b"
                     /gene_synonym="RGD1565759"
                     /inference="alignment:Splign:2.1.0"
     exon            1015..1140
                     /gene="Actr3b"
                     /gene_synonym="RGD1565759"
                     /inference="alignment:Splign:2.1.0"
     exon            1141..1224
                     /gene="Actr3b"
                     /gene_synonym="RGD1565759"
                     /inference="alignment:Splign:2.1.0"
     exon            1225..1498
                     /gene="Actr3b"
                     /gene_synonym="RGD1565759"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gctaggctct gggtccccgg tgcacgctgg ggctggtggg gaccgagcgc ctcgtggacg
       61 agcatggcgg gctcgctgcc tccctgcgtg gttgactgcg gcaccgggta caccaagctc
      121 ggctacgcag gcaacactga gccacagttc attattccgt catgtattgc catccgagag
      181 tcggcaaagg tagttgacca agcccagagg agggtgttga gaggagttga tgaccttgac
      241 ttcttcatag gggatgaagc cattgataaa cctacctacg ctaccaagtg gcctatacga
      301 catggcatcg ttgaagactg ggatcttatg gaaaggttca tggaacaggt ggtctttaag
      361 tatctccgtg ccgaacctga ggaccattat tttttaatga cagaacctcc actgaacaca
      421 ccagagaaca gagagtacct tgcagaaatc atgtttgaat catttaatgt accagggctc
      481 tacattgcag tacaggcagt gctggccctg gcggcctctt ggacatcccg gcaagttggt
      541 gaacgcaccc tgacggggat agtcatagac agtggagatg gcgtcaccca tgttatcccg
      601 gtggcagaag gttatgtaat tggaagctgc atcaaacaca tcccaattgc aggtagagat
      661 attacgtatt tcattcaaca gctgctaagg gagagggagg tgggaatccc tcctgagcag
      721 tcactggaga ccgcaaaagc cattaaggag aagtactgtt acatatgccc tgatattgtc
      781 aaggaatttg ctaaatatga cgtggatccc cggaagtgga tcaaacagta tacagggatc
      841 aatgcaatca accagaggaa gttcattata gatgttggtt atgagaggtt cctgggacca
      901 gaaatattct ttcaccctga gtttgccaac ccagacttta tggagtccat ctcggatgtc
      961 gttgatgaag tcatacagaa ctgtcccata gacgtgcgcc gaccgctgta taagaacatc
     1021 gttctctctg gaggctccac aatgttcaga gattttggac gccgtctgca gagagatttg
     1081 aagagagtgg tggacgccag gttaaagctg agccaagagc tcagcggggg caggataaag
     1141 cctaagcctg tggaggtgca ggtgatcaca caccacatgc agcgctacgc cgtctggttt
     1201 ggaggctcta tgctcgcctc gactccggag ttctttcagg tctgccacac caagaaggac
     1261 tatgaggaat acggccccag catctgccgc cacaaccccg tcttcggagt catgtcctag
     1321 tgtctgcctc agagccattg tcttgacagt gtcctgttgg ggaataagtg tccttcagaa
     1381 cccagagcag ccttggctcc tgtacatagc agtgtggaat cagtgtgtga gcagcgtgat
     1441 ttcatggccg gtgctcgggg ccgggcacag tcttcccagt aaagccattt atccggtg
//
