LOCUS       XM_017599128            3651 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus actin related protein 2 (Actr2),
            transcript variant X1, mRNA.
ACCESSION   XM_017599128
VERSION     XM_017599128.2
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051349.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Jan 21, 2021 this sequence version replaced XM_017599128.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3651
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3651
                     /gene="Actr2"
                     /note="actin related protein 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 5
                     mRNAs, 211 ESTs, 56 long SRA reads, 2 Proteins, and 100%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 61 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:289820"
                     /db_xref="RGD:1310826"
     CDS             85..1284
                     /gene="Actr2"
                     /codon_start=1
                     /product="actin-related protein 2 isoform X1"
                     /protein_id="XP_017454617.1"
                     /db_xref="GeneID:289820"
                     /db_xref="RGD:1310826"
                     /translation="MDSQGRKVVVCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRST
                     TKVGNIEIKNNKKMDLMVGDEASELRSMLEVNYPMENGIVRNWDDMKHLWDYTFGPEK
                     LNIDTRSCKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGLLTGV
                     VVDSGDGVTHICPVYEGFSLPHLTRRLDIAGRDITRYLIKLLLLRGYAFNHSADFETV
                     RMIKEKLCYVGYNIEQEQKLALETTVLVESYTLPDGRIIKVGGERFEAPEALFQPHLI
                     NVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSRLERELKQLYLERV
                     LKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADIMKDKDNFWMTRQEYQEKGVRVLE
                     KLGVTVR"
ORIGIN      
        1 gtttgggcgg agcggctggc cgagggcggg gccgtgtgga ggaggaagcg ggccaggccg
       61 ggcggcggct caccagggcg aaccatggac agccagggca ggaaggtggt ggtgtgcgac
      121 aacggcactg ggtttgtgaa gtgtggatat gcaggctcta actttccaga acacatcttc
      181 ccagctttgg ttggaagacc tattatcaga tcaaccacca aagtgggaaa cattgaaatc
      241 aagaataaca aaaagatgga tctcatggtt ggcgatgagg caagtgagct gcgctccatg
      301 ttggaggtga actacccgat ggagaacggc atcgtgcgca actgggacga catgaagcac
      361 ctgtgggact acacattcgg gccagagaag ctcaatatag acaccaggag ctgcaagatc
      421 ttacttacag aacccccaat gaatccaacc aagaacagag agaagattgt cgaggtaatg
      481 tttgaaactt accagttttc tggtgtgtat gtagccatcc aagcagttct gactttgtat
      541 gctcaaggtt tactgactgg tgtggtagtg gactctggag atggtgtcac tcacatttgc
      601 ccagtatatg aaggcttttc cctccctcac cttacaagga ggctggatat tgctgggagg
      661 gatattacca ggtatcttat caagctgctg ctgttgcgag gatatgcctt caaccattct
      721 gctgactttg agacagttcg catgattaaa gaaaaacttt gttatgtggg ttacaatatt
      781 gagcaagagc agaagctggc cttagagacc acagtgctag ttgagtcata cactcttcca
      841 gatggacgta ttattaaggt tggaggagaa agatttgaag caccagaagc tttatttcag
      901 cctcatttga tcaatgttga gggggttggt gttgctgaat tgctttttaa cacaatccag
      961 gcagccgaca ttgataccag atctgaattt tacaagcaca ttgtgctttc tggaggttct
     1021 accatgtatc ctggcctgcc atcgaggttg gaacgagagc ttaaacagct ttacctagaa
     1081 cgagttctga aaggagatgt ggagaaactt tcgaaattta agatccgcat tgaagacccg
     1141 cctcgcagga agcacatggt gttcttgggt ggcgcagtcc tagcagacat catgaaagac
     1201 aaagacaact tctggatgac cagacaagag taccaagaaa agggtgtccg tgtgctggag
     1261 aaactcggtg tgactgttcg ataaaatagc aggcttgtcc ccatcacgcc tctaatgctt
     1321 tttctttttc ccttttaaaa aaaaaaaaaa aaaaattctt taatgccaat ctttaaactc
     1381 attcaactcc aggactgaag gaggcctctc tgtccctttt gacagaaagg tcaagttttt
     1441 ttctctgtct tggggaagct ttgctgaatt cttgttagta tgggtaaacc tggttgttta
     1501 agacagccgg ttctctgcag acctaactga gggcaaaggg ttgctgctgc tccgttcctt
     1561 tctgtgtagg cattgagata ttcttcaggc ttccagtctt tgcttcattg cctaacgctg
     1621 ctagatttag ttttagcgct gtaggtggta tgtctttatt agcataaaaa actttcccag
     1681 gagctcttac atagtctggg tgggggtggt gagggatggg tgggcagctc tagcccttga
     1741 gggcatttcc tctgtagtgt tagctttcag cagttacctg ctgcctcttt ttagtacctg
     1801 aagcgtctct gattaacatc ttagggaaat attcagctca gaactaaggt gtttggggca
     1861 ggtttttata tgatgaaaca aatgggtggt ctttctattg tgatttttga ggttttctgc
     1921 ttctgggtac aaaagacgaa tgaacctcat ttaccgtact ttgacttggt agggtttctt
     1981 cttttggtct gcccgggact gtttccatgt gacagaaaaa aagcaagcct agaggcttag
     2041 gggctgtttg ccccttaagt cagcctgtca gctgggagta tatttcctag actaccagtg
     2101 aaaaagcttt tgctaggtca aattgcagat agaaaattgc tcaagggcca gcattttcta
     2161 aatgctgttt ttgctggaag cattgaggta atgataccaa gttccattct tgaaagcttc
     2221 acgtttctgt tcctgatcag cgcttcttga caaaggcagc tgtacagaga agtcgtggcc
     2281 ggagttaatc ataattgctg tgttagcatt gacactggga cttggtgcca gctgtgttgt
     2341 gttgtgtttt catgagacct gggactacaa ttttagcaac aacaaccaca ataggaaatt
     2401 taccagtagt cacctatgtg tggtcagtcg tggaggcctt ttcccagccc tctcttgttc
     2461 ttacaggaag agtgcagacc tgtcaggaaa ccctgttcat gagtcctgtt ggtattgtct
     2521 gtcaactcag agacaatcgg atggtaccca agtgtgaggt ctacctaaca ctgaaaaatg
     2581 aatgagaagc tgtatcacag aaaatacaaa atgatgattc tgagagaaat attttccttt
     2641 gtttcagaat attctttact aatgatgaat ttgaaaggat ggcttttttc ctttttcttt
     2701 ctttttggat gcttaaaatc agaattttta atgaattttt tttaggtaac tttataatta
     2761 gttcatataa aatcagcagc aaaaggaagt ttgtcttaat aatgcagctt ctgtgatatt
     2821 aagtattttt gcctgtttta cctcaatttg aacaaatagg agaagtctgg gtgcatgctg
     2881 gacatgctca gtacacacaa tagcccgccg gtgccggctg ctcggcgttg ggtgcgagac
     2941 tcagagtcac agaactccta agcacaccta aatcatgctg tcaaattctc cagtcttggg
     3001 agtcctgggc ccattacagg acacatgctg tatataggac tggtaccaag gtctattgag
     3061 tgtagaaaat gatcaactct tggctttgac catggcttta aatgaggggt ggaaaacaag
     3121 gaagagtagg atggaatcga ataaaacagt ggaagaacat tattctttgt accgtgaatg
     3181 tagaatttgt ttttatttca taattctgct agcaaacatg actgttaaaa tgatgtattt
     3241 atatatgtaa taatttagag attccatttt atagttctcc tactctaagg tgaaatgatg
     3301 aatttactaa tttgggagtt gggacatact gtattctatt ggaggcgtcc ttcaggtttg
     3361 agtccttcaa aataaaacaa agcctttttt aaaagatctg atttttagct cttgaaaccc
     3421 atcgtcattt agatttccaa tgctaattaa aattccttta tttttaaatt acaatcacca
     3481 atgccttgag gaacgtctta gaaaatgtgg tattgggtgt taactcccca gttctgagtg
     3541 ctgttagctt ctatccggca agtactggaa agcaatggaa agctaaacat tctaagttta
     3601 acacaataca cttctttttg attaagaaaa taaattaaat ttacaaagta a
//
