LOCUS       NM_001039028            3193 bp    mRNA    linear   ROD 20-MAR-2023
DEFINITION  Rattus norvegicus actin related protein 1B (Actr1b), mRNA.
ACCESSION   NM_001039028
VERSION     NM_001039028.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3193)
  AUTHORS   Jakobsen L, Vanselow K, Skogs M, Toyoda Y, Lundberg E, Poser I,
            Falkenby LG, Bennetzen M, Westendorf J, Nigg EA, Uhlen M, Hyman AA
            and Andersen JS.
  TITLE     Novel asymmetrically localizing components of human centrosomes
            identified by complementary proteomics methods
  JOURNAL   EMBO J 30 (8), 1520-1535 (2011)
   PUBMED   21399614
REFERENCE   2  (bases 1 to 3193)
  AUTHORS   Ghosh D, Lippert D, Krokhin O, Cortens JP and Wilkins JA.
  TITLE     Defining the membrane proteome of NK cells
  JOURNAL   J Mass Spectrom 45 (1), 1-25 (2010)
   PUBMED   19946888
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            EV779654.1, DY315273.1, BC085338.1, CO556025.1, BQ206830.1 and
            BQ203129.1.
            
            On Jan 26, 2008 this sequence version replaced NM_001039028.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ228979.1, BC166803.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760494, SAMN06621351
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-689               EV779654.1         29-717
            690-1106            DY315273.1         303-719
            1107-2083           BC085338.1         56-1032
            2084-2634           CO556025.1         114-664
            2635-3172           BQ206830.1         19-556              c
            3173-3193           BQ203129.1         1-21                c
FEATURES             Location/Qualifiers
     source          1..3193
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="Sprague-Dawley"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /map="9q21"
     gene            1..3193
                     /gene="Actr1b"
                     /note="actin related protein 1B"
                     /db_xref="GeneID:316333"
                     /db_xref="RGD:1307380"
     exon            1..153
                     /gene="Actr1b"
                     /inference="alignment:Splign:2.1.0"
     CDS             106..1236
                     /gene="Actr1b"
                     /note="ARP1 actin-related protein 1 homolog B, centractin
                     beta; ARP1 actin related protein 1 homolog B"
                     /codon_start=1
                     /product="beta-centractin"
                     /protein_id="NP_001034117.2"
                     /db_xref="GeneID:316333"
                     /db_xref="RGD:1307380"
                     /translation="MESYDIIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKH
                     MRVMAGALEGDLFIGPKAEEHRGLLTIRYPMEHGVVRDWNDMERIWQYVYSKDQLQTF
                     SEEHPVLLTEAPLNPSKNREKAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDS
                     GDGVTHAVPIYEGFAMPHSIMRVDIAGRDVSRYLRLLLRKEGADFHTSAEFEVVRTIK
                     ERACYLSINPQKDEALETEKVQYTLPDGSTLDVGPARFRAPELLFQPDLVGDESEGLH
                     EVLAFAIHKSDMDLRRTLFSNIVLSGGSTLFKGFGDRLLSEVKKLAPKDVKIKISAPQ
                     ERLYSTWIGGSILASLDTFKKMWVSKKEYEEDGSRAIHRKTF"
     exon            154..218
                     /gene="Actr1b"
                     /inference="alignment:Splign:2.1.0"
     exon            219..294
                     /gene="Actr1b"
                     /inference="alignment:Splign:2.1.0"
     exon            295..420
                     /gene="Actr1b"
                     /inference="alignment:Splign:2.1.0"
     exon            421..545
                     /gene="Actr1b"
                     /inference="alignment:Splign:2.1.0"
     exon            546..762
                     /gene="Actr1b"
                     /inference="alignment:Splign:2.1.0"
     exon            763..855
                     /gene="Actr1b"
                     /inference="alignment:Splign:2.1.0"
     exon            856..1030
                     /gene="Actr1b"
                     /inference="alignment:Splign:2.1.0"
     exon            1031..1092
                     /gene="Actr1b"
                     /inference="alignment:Splign:2.1.0"
     exon            1093..1133
                     /gene="Actr1b"
                     /inference="alignment:Splign:2.1.0"
     exon            1134..3176
                     /gene="Actr1b"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cggcgcggtg tctggagtcg cgtccgtcca ggtctccccg cgagccttgt agcctgccgg
       61 tcctcctgca gcccgcctgc tgggcagggc cggctcggcc gggccatgga gtcctacgac
      121 atcatcgcta accagcccgt ggtcatcgac aatggttcag gggtgatcaa ggctggcttt
      181 gcaggagacc agattcctaa gtactgtttc ccaaactatg tcggacggcc aaagcacatg
      241 cgggttatgg ctggagccct ggagggggac ctgttcattg gaccgaaagc agaggagcac
      301 cgggggctgc tgaccatccg ataccctatg gagcacggtg tggtacggga ctggaacgac
      361 atggagcgca tctggcagta cgtctactct aaggaccagc tacagacctt ctccgaggag
      421 catcctgttc ttctaacgga ggccccactg aaccccagta agaaccggga gaaggcggca
      481 gaggtgttct ttgaaacctt caacgttcct gcactgttta tctccatgca ggccgtgctc
      541 agcctgtacg caacaggacg cactactgga gtggttttag actcggggga cggggtcact
      601 cacgctgtcc ccatctatga gggctttgcc atgccgcact ccatcatgcg ggtagacatt
      661 gcgggccggg acgtctcccg atacctgagg ctgctgctgc gcaaggaagg cgctgacttc
      721 cacacctcag ctgagtttga ggttgtgcgg accatcaaag agcgagcttg ctacctgtcc
      781 atcaacccac aaaaggacga ggctctagag actgagaagg tgcagtacac ccttccagac
      841 ggcagcacgc tcgatgtggg gcctgcacgc ttccgagccc ctgagctgct gttccagcca
      901 gacctggttg gggatgagag tgagggactc catgaagttt tggccttcgc catccacaag
      961 tcggacatgg acctccgccg gacgctcttc tccaatatcg tgctgtcagg gggctcaaca
     1021 ctctttaaag gcttcggaga ccggttacta agtgaagtaa agaaacttgc cccaaaggat
     1081 gtgaaaatca agatctctgc tcctcaggaa aggctgtact ccacatggat cggcggctcc
     1141 atcctcgcct cactggacac cttcaagaag atgtgggtat ccaaaaagga atatgaagaa
     1201 gatggctccc gtgcgattca tcgcaaaacc ttctaatgcc caaggagggt ggacatactg
     1261 ggagagggag gaaaggggag ccagagccct gacccctttt ggtctgggtt cgtgttctaa
     1321 gattagggtc ccctgcatgc cctgtccccg gagcagatgg tgcagtcatg gtcacctgta
     1381 gccctcccct ccccctgtgc tcagcataca cacagacaca gagattaacg tttagctgcg
     1441 tggacggctg tcccaaacgg gagcataggg actgaggaac ccaatgttga gttggtgcaa
     1501 gtgaccctct cagcagggct actttggcct gtggttcctt gctctggcct tgaagctcaa
     1561 agaccagacc cacgtgttcc acttgctgta acagtggggt ggggctagac gccctgaatc
     1621 tctggagtag gctgaaggga gggacagcca ggagctccct tcagggtgtt gaggctcact
     1681 ggtgtgtttc ctgccgctgc ctctttctgg cctgaaaagg caagtgtcct gtctaggact
     1741 gactaggggc agtcctacat tcccattgag gggatgtagc caagggtcag agcatcagag
     1801 ccatgggcag ccacagctcg tggtttgccc cactcccttt gaaagcacta cactgatttg
     1861 ctactccctc ctctttccct cggtgccctg gacaggaagg ggttaatggt ctttatttgc
     1921 tgaggtaaag ccatttaacc aggactcaga ccccaagggt aggcatgttc tcacctccct
     1981 caagaaaggt cttcaccccc ctctccagat ctgaacagta atttaacaca gttgcctgaa
     2041 aaatacttgt ttttataaat catagtaata attatggaca aggcccggtg tgtggctctg
     2101 attcttgtgg ctctgtgctc tcatttgctc agcagtccct gggcgcgttg agagaaagga
     2161 cactggcaga aagctctgga gcttgaggca acagaacaag ggagagcagc ctcaccctcc
     2221 tgcgaggctt gctagggctg ctgtgtgtgc ttcatgtgat gtgtgttggc agcagaggtg
     2281 tgcaggtccc agcttagggc aggaccagaa ggaagggcag cctaagaatg gaccaggttc
     2341 cacaggaagg aggacagtct gcaggaggcc tgcaggcagc aagagctcag caagtagaga
     2401 agtttgcttg tttggtactt actgcacaac acatgtttga ggctgatgga gaacaaggta
     2461 caattttgcc ccccaaaagc gttcatctta gaggagaaaa atgccagcca ttttggaacg
     2521 gtgttgggcc gacaggctgt gccaataggc ggggcccgct ggcttataag agcttggaca
     2581 gtcagtgggt agggagagta ctttgacagt gaggctgggg agggaacatt ggcaaggaag
     2641 ggtaaattgg tctgtggcac agtgacataa accaaagagg tcagttgggc tagcatgtgg
     2701 aggatctgag gaaggaagga cgttagctgt gtgctaggtg acaagtttcc actatggaag
     2761 actagtgaac agagccaagt gttgaaagct gtaggccaaa gtgctgatca ggaatgtgtg
     2821 cagcagattc tgtgcggccc tgtggtcgta gcatagcatc aaaagtttac acaaaagcct
     2881 gtgctaaggg accctgcaaa ccagctccag tgcaggcctc cgttggcaca ctggctccca
     2941 gccacctgtg tttggaactt ccctgctaag ctcctccctc ctcatgccca cattttgtcc
     3001 gtctgagtct ggtctcctac agtgcctctg ctacccatgc tttcctgtta agccccagct
     3061 cacaaccctg ctccatcctg cccaccagtg tgtttgctca taatctactg tgcgggtaac
     3121 cacctcaaac ctgtaatgag ttataagcca tacaataaaa tattcatgag tccttaaaaa
     3181 aaaaaaaaaa aaa
//
