LOCUS       NM_001106364            2767 bp    mRNA    linear   ROD 01-JUN-2024
DEFINITION  Rattus norvegicus actin related protein 1A (Actr1a), mRNA.
ACCESSION   NM_001106364 XM_001059244 XM_238177
VERSION     NM_001106364.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2767)
  AUTHORS   Garifulin,O.M., Kykot,V.O., Gridina,N.Y., Kiyamova,R.G., Gout,I.T.
            and Filonenko,V.V.
  TITLE     Application of serex-analysis for identification of human colon
            cancer antigens
  JOURNAL   Exp Oncol 37 (3), 173-180 (2015)
   PUBMED   26422100
REFERENCE   2  (bases 1 to 2767)
  AUTHORS   Kiyomitsu,T. and Cheeseman,I.M.
  TITLE     Chromosome- and spindle-pole-derived signals generate an intrinsic
            code for spindle position and orientation
  JOURNAL   Nat Cell Biol 14 (3), 311-317 (2012)
   PUBMED   22327364
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 2767)
  AUTHORS   Jakobsen,L., Vanselow,K., Skogs,M., Toyoda,Y., Lundberg,E.,
            Poser,I., Falkenby,L.G., Bennetzen,M., Westendorf,J., Nigg,E.A.,
            Uhlen,M., Hyman,A.A. and Andersen,J.S.
  TITLE     Novel asymmetrically localizing components of human centrosomes
            identified by complementary proteomics methods
  JOURNAL   EMBO J 30 (8), 1520-1535 (2011)
   PUBMED   21399614
REFERENCE   4  (bases 1 to 2767)
  AUTHORS   Gonzales,P.A., Pisitkun,T., Hoffert,J.D., Tchapyjnikov,D.,
            Star,R.A., Kleta,R., Wang,N.S. and Knepper,M.A.
  TITLE     Large-scale proteomics and phosphoproteomics of urinary exosomes
  JOURNAL   J Am Soc Nephrol 20 (2), 363-379 (2009)
   PUBMED   19056867
REFERENCE   5  (bases 1 to 2767)
  AUTHORS   Werner,H.B., Kuhlmann,K., Shen,S., Uecker,M., Schardt,A.,
            Dimova,K., Orfaniotou,F., Dhaunchak,A., Brinkmann,B.G., Mobius,W.,
            Guarente,L., Casaccia-Bonnefil,P., Jahn,O. and Nave,K.A.
  TITLE     Proteolipid protein is required for transport of sirtuin 2 into CNS
            myelin
  JOURNAL   J Neurosci 27 (29), 7717-7730 (2007)
   PUBMED   17634366
REFERENCE   6  (bases 1 to 2767)
  AUTHORS   Schroer,T.A.
  TITLE     Dynactin
  JOURNAL   Annu Rev Cell Dev Biol 20, 759-779 (2004)
   PUBMED   15473859
  REMARK    Review article
REFERENCE   7  (bases 1 to 2767)
  AUTHORS   Gulesserian,T., Kim,S.H., Fountoulakis,M. and Lubec,G.
  TITLE     Aberrant expression of centractin and capping proteins, integral
            constituents of the dynactin complex, in fetal down syndrome brain
  JOURNAL   Biochem Biophys Res Commun 291 (1), 62-67 (2002)
   PUBMED   11829462
REFERENCE   8  (bases 1 to 2767)
  AUTHORS   Fouquet,J., Kann,M., Soues,S. and Melki,R.
  TITLE     ARP1 in Golgi organisation and attachment of manchette microtubules
            to the nucleus during mammalian spermatogenesis
  JOURNAL   J Cell Sci 113 (Pt 5), 877-886 (2000)
   PUBMED   10671377
REFERENCE   9  (bases 1 to 2767)
  AUTHORS   Heimann,K., Percival,J.M., Weinberger,R., Gunning,P. and Stow,J.L.
  TITLE     Specific isoforms of actin-binding proteins on distinct populations
            of Golgi-derived vesicles
  JOURNAL   J Biol Chem 274 (16), 10743-10750 (1999)
   PUBMED   10196146
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH473986.1.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_238177.4, XM_001059244.1.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA5760383,
                              SAMEA5760389 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2767
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q54"
     gene            1..2767
                     /gene="Actr1a"
                     /note="actin related protein 1A"
                     /db_xref="GeneID:294010"
                     /db_xref="RGD:1307025"
     exon            1..112
                     /gene="Actr1a"
                     /inference="alignment:Splign:2.1.0"
     CDS             65..1195
                     /gene="Actr1a"
                     /note="centractin; ARP1 actin-related protein 1 homolog A,
                     centractin alpha; ARP1 actin related protein 1 homolog A"
                     /codon_start=1
                     /product="alpha-centractin"
                     /protein_id="NP_001099834.1"
                     /db_xref="GeneID:294010"
                     /db_xref="RGD:1307025"
                     /translation="MESYDVIANQPVVIDNGSGVIKAGFAGDQIPKYCFPNYVGRPKH
                     VRVMAGALEGDIFIGPKAEEHRGLLSIRYPMEHGIVKDWNDMERIWQYVYSKDQLQTF
                     SEEHPVLLTEAPLNPRKNRERAAEVFFETFNVPALFISMQAVLSLYATGRTTGVVLDS
                     GDGVTHAVPIYEGFAMPHSIMRIDIAGRDVSRFLRLYLRKEGYDFHSSSEFEIVKAIK
                     ERACYLSINPQKDETLETEKAQYYLPDGSTIEIGPSRFRAPELLFRPDLIGEESEGIH
                     EVLVFAIQKSDMDLRRTLFSNIVLSGGSTLFKGFGDRLLSEVKKLAPKDVKIRISAPQ
                     ERLYSTWIGGSILASLDTFKKMWVSKKEYEEDGARSIHRKTF"
     exon            113..177
                     /gene="Actr1a"
                     /inference="alignment:Splign:2.1.0"
     exon            178..253
                     /gene="Actr1a"
                     /inference="alignment:Splign:2.1.0"
     exon            254..379
                     /gene="Actr1a"
                     /inference="alignment:Splign:2.1.0"
     exon            380..504
                     /gene="Actr1a"
                     /inference="alignment:Splign:2.1.0"
     exon            505..721
                     /gene="Actr1a"
                     /inference="alignment:Splign:2.1.0"
     exon            722..814
                     /gene="Actr1a"
                     /inference="alignment:Splign:2.1.0"
     exon            815..989
                     /gene="Actr1a"
                     /inference="alignment:Splign:2.1.0"
     exon            990..1051
                     /gene="Actr1a"
                     /inference="alignment:Splign:2.1.0"
     exon            1052..1092
                     /gene="Actr1a"
                     /inference="alignment:Splign:2.1.0"
     exon            1093..2767
                     /gene="Actr1a"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtcagtggcg tttgctgcgg accgggctgg cagttccttc ctcggaggga aagattcctc
       61 tgccatggag tcctacgatg tgatcgccaa ccagcctgtt gtgatcgaca atggatccgg
      121 tgtgattaaa gctggttttg ctggtgatca gatccccaaa tactgctttc caaactatgt
      181 gggcagaccc aaacatgttc gagtcatggc aggagccctc gaaggtgaca tcttcattgg
      241 ccccaaagct gaggagcacc gggggctgct gtcaatccgc taccccatgg aacatggcat
      301 cgtcaaggac tggaacgaca tggagcgcat ctggcaatat gtctattcta aggaccagct
      361 gcagactttc tcagaggagc atcctgtgct cctgactgag gcacctttaa accctcggaa
      421 aaaccgggag cgagcggcag aagttttctt cgagaccttc aatgtgccag ctctcttcat
      481 ctccatgcaa gctgtgctta gcctttatgc cacaggcaga accacaggtg tggtgttgga
      541 ttctggggat ggcgtcaccc atgcagtccc gatttacgaa ggcttcgcca tgcctcactc
      601 catcatgcgc attgacattg ccggccgcga tgtctcacgc ttcctccgcc tctacctacg
      661 aaaggagggc tacgatttcc actcctcctc cgagtttgag attgtcaagg ccataaagga
      721 aagagcttgc tacctgtcca taaaccccca gaaggatgag acactggaga cggagaaggc
      781 tcagtactac ctgcccgatg gcagcaccat tgagattggc ccttccaggt tccgggcccc
      841 tgagctgctg ttcaggcctg acttgattgg cgaggagagt gagggtatcc atgaggtgct
      901 ggtgttcgct atccagaagt cagacatgga tttacggcgg acgctctttt ccaacattgt
      961 cctctcagga ggttctaccc tcttcaaagg ttttggggac aggctactga gtgaagtgaa
     1021 gaaactggct ccaaaagatg tgaagatcag gatatctgca ccccaggaga gactgtattc
     1081 cacatggatt ggaggctcta tccttgcctc cctggatacc tttaagaaga tgtgggtctc
     1141 caagaaggaa tatgaagaag atggtgcccg atccatccac aggaaaacct tctaatgttg
     1201 cgacatcacc acctctctct gaagttaact ccactttaaa actttcttga gctggagtgt
     1261 ttgagaggaa ctgcctgtgt gtatgagtga gtgtgtgggt atggtatgag tgtgtactac
     1321 tatggagtgc cgtgtggccc agaaatcctg ggcccagaga ggacattgaa ctacccacga
     1381 gggggatggc ctgaggcctg gggttgacta ctcactggcc ccttgcagga agagctctgg
     1441 cagaggccca ctcctttctc agccaggcct ttggctgact gtgtggaact atggttacta
     1501 ccatgagaga ccttgctgct gccaatctcg gctgggctgg ccctgctcca ctccacccga
     1561 gtgccctgag gccagaggca gctgctgtct ccccagctca tcattctgtg ctgcccatgc
     1621 ctctggatca caccgagaac tggggctggg gttaagttct gtctggtttg gttcagtttg
     1681 ggtttgggag actgaaaaag cactctagca gtggttaaag actgggttca ggagagagca
     1741 gggtacactc acatccacct gggaaccagg tagcaatttg gaccgcactg ggcatttggg
     1801 aaggatgggg gatagcttca gggttgattt acaagctcca gccacatcca gggctcgggg
     1861 acactgtaag gactgtgggc tccaggtcct gctgtttgct tctcatacat cttggtttca
     1921 ataccatcgc catcggttta tttattgaca tgtttgttca gtaaagggag tagagagggc
     1981 tcctgtctcc tgcccactgg tcacctttgc ttacactaat gtttacagca cccaggcttt
     2041 ccacagtatc aggggctctg gcattccctg ctgatagtga actgacagta ttcacgggcc
     2101 tcaggaccct gtgggattgg aggccgcaca tgaaggcacc ccaaccagcc tcttcctttc
     2161 tcctggcccc acttgctcac tgccctggag ccaacaggct ggttgtggtt ggattttcta
     2221 agacaggaag gagcatccct ctttggcaga ggccctttgt gaggggggtg tgttggagat
     2281 ctagaccctt caaaacaaag caagctgcag ttaaccatgt tgcctttgcc actctaattg
     2341 accgggcgac taagtcaaag tggcagggag gcccccttcg aggttggtca gattgaaggg
     2401 agagaagggg ccagaccaaa gtgccaagat ctgatggatt ccagccttgt cctcggaagt
     2461 ggtccaaggg cctttgtacc cagtacaaag ctagggtgag tctgtgtgca cggcaccctc
     2521 actagtgatg ccgtctcacc ccagttccag attccagaca gtattctctc tccaccatcc
     2581 tatgaccaaa ggcccctgcc agatgtaaag cgaagctggt gtgtgtggaa tcgatgtggc
     2641 agcccgtgga ctgcagtgcg cttagccagc tcacctctct cagcccaagc ctgtcccctg
     2701 cacagcctcg caaagccaca ttgcctggtg gggcccagtg tacttaaata aagtcgttcc
     2761 gatagat
//
