LOCUS       NM_001346308            3097 bp    mRNA    linear   ROD 28-MAR-2024
DEFINITION  Rattus norvegicus actin maturation protease (Actmap), mRNA.
ACCESSION   NM_001346308 XR_001835699
VERSION     NM_001346308.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Oct 9, 2016 this sequence version replaced XR_001835699.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26643289.1225.1,
                                           SRR26643299.1726.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-88                JAXUCZ010000001.1  91618012-91618099
            89-541              JAXUCZ010000001.1  91618905-91619357
            542-610             JAXUCZ010000001.1  91622514-91622582
            611-735             JAXUCZ010000001.1  91622883-91623007
            736-865             JAXUCZ010000001.1  91624112-91624241
            866-936             JAXUCZ010000001.1  91624336-91624406
            937-3097            JAXUCZ010000001.1  91625330-91627490
FEATURES             Location/Qualifiers
     source          1..3097
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q21"
     gene            1..3097
                     /gene="Actmap"
                     /gene_synonym="RGD1560854"
                     /note="actin maturation protease"
                     /db_xref="GeneID:499106"
                     /db_xref="RGD:1560854"
     exon            1..88
                     /gene="Actmap"
                     /gene_synonym="RGD1560854"
                     /inference="alignment:Splign:2.1.0"
     exon            89..541
                     /gene="Actmap"
                     /gene_synonym="RGD1560854"
                     /inference="alignment:Splign:2.1.0"
     CDS             201..1274
                     /gene="Actmap"
                     /gene_synonym="RGD1560854"
                     /note="UPF0692 protein C19orf54 homolog"
                     /codon_start=1
                     /product="actin maturation protease"
                     /protein_id="NP_001333237.1"
                     /db_xref="GeneID:499106"
                     /db_xref="RGD:1560854"
                     /translation="MTSQCSFPLKPIIPPIIHETQDTNIPPPLPPNPPDLALPSPPCS
                     LQASVSPPPPPPPPPPPPLPPPPPSAVEVALPHVYGLKNSRLLKEALEKAGPAPKGKV
                     DVKRLLKLHKDRFRRDLQWILFCADLPSLIQEGPQCGLVALWMAGALLSTPGSISLER
                     LVQVAKERGYTAQGEMFSVADMAKLAQETLGCQAELLCGGLGGPNRDRVLQHLITGHP
                     LLIPYDEDFNHEPCQKKGHKAHWAVSAGVLIGVQNVPSPGYIEDSELPGLFHPVPGAP
                     HQPPSFPEESSPSAIFLLSKQGKSWHYQLWDYSQVRDSNLQLTDFSPARAADGRVYVV
                     PAGGVQAGLCGQALLLRPQEGSH"
     exon            542..610
                     /gene="Actmap"
                     /gene_synonym="RGD1560854"
                     /inference="alignment:Splign:2.1.0"
     exon            611..735
                     /gene="Actmap"
                     /gene_synonym="RGD1560854"
                     /inference="alignment:Splign:2.1.0"
     exon            736..865
                     /gene="Actmap"
                     /gene_synonym="RGD1560854"
                     /inference="alignment:Splign:2.1.0"
     exon            866..936
                     /gene="Actmap"
                     /gene_synonym="RGD1560854"
                     /inference="alignment:Splign:2.1.0"
     exon            937..3097
                     /gene="Actmap"
                     /gene_synonym="RGD1560854"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gccaagctac gctgcaaaga cacacagctt ctttcttccc tggttccggc tacccccttc
       61 cgcgagctaa tcagggcccg caaactccgt cttaatgtgc aggcctgaat atctctcatc
      121 cagttctttt aaaaactgaa aatctccatc cttgagagat ttaggaggat cctctttctc
      181 attcttcctg aagaccccaa atgacttctc aatgctcttt ccccctaaaa cccataatcc
      241 ccccaataat tcatgagacc caagacacca acattccacc tcctttaccc ccaaatcccc
      301 cggacttagc tttaccatct cctccttgta gtctccaggc ttctgtttca cccccacctc
      361 cgcccccgcc ccctccacca ccccctctcc caccccctcc accctctgct gtggaggttg
      421 ctctccctca tgtctacggc ctgaagaaca gccggctcct gaaggaggcc ttggagaagg
      481 ctggcccagc tccaaaaggc aaagttgatg taaagagact cctgaagctg cacaaggaca
      541 ggtttcgaag ggacctgcag tggatcctct tttgtgctga cctgccgtcg ctcatccagg
      601 aaggccctca gtgtggcctg gtggccttgt ggatggcagg agctcttctt tcaacacctg
      661 gcagcatctc cttggagaga ctagtgcagg tggccaagga gagaggctac acagcacagg
      721 gagaaatgtt ctctgtggct gacatggcca aactggccca ggagactttg ggctgtcagg
      781 ctgagctcct ttgtggtggc ctgggtggtc ccaacagaga tcgagttcta cagcacctca
      841 tcaccggaca tcccctgctc atcccctatg atgaggattt caaccatgag ccatgtcaaa
      901 agaaaggcca taaggcccac tgggctgtga gtgcaggggt cctgataggt gtgcagaatg
      961 tgcccagccc tggctacatt gaagactctg agttgccagg cctcttccac ccagtgcctg
     1021 gtgcacccca ccaaccacca tccttcccag aggaaagctc cccaagtgcc atcttccttc
     1081 tctccaagca gggcaagagt tggcattacc agctgtggga ctacagccaa gtccgggata
     1141 gcaacctgca gctgacagac ttctcacccg caagggctgc agatggacgg gtgtacgtgg
     1201 tacctgctgg tggggtacag gctggcctct gtggccaggc cctgctgctc agaccacagg
     1261 aggggagcca ttagctgggg ccgggacacc tgcttttaac ttctctccat caacattaga
     1321 atgcttcagc tccatccctt tatgtggcat tttcagtcca gctcgttcca tctgcctata
     1381 gtgagtatct tgaagaccag aagtctttca aacattaccc catatatgga gtcacaagct
     1441 tcaccactgt ccaaagtcta aactaattac ctccacaatc gagcattgct ttggctaagg
     1501 gaaacttgtt tttgtggagg atttttggtt tttaaagcat gatctctgcc ttgggggtgg
     1561 tagcacatac gtctaaaccc agcactcaga aggtagagca gtggttctca acctgtgggt
     1621 catgcagcca gacttttact actgttggtt attccacctt tcaaccctaa ccatagacag
     1681 ggaaaagggg acgtcaccct ccttcaactg ctgcctgcag atgaggggcg gcaggttcct
     1741 tggggcaagt ttgatctttg ctgtcaggat atctaatttc tctctttttt agaaagaatt
     1801 atttatttta tgttacgcgt acaccgtagc tgtcttcaga cacaccagaa gagggcatca
     1861 gatcccatta cagatggctg tgagccacca tgtggttgct gggaattgaa ctcaggacct
     1921 ctggaagagc agtcagtgct cttaaccact gagccatctc tccagcccct ctgatttctc
     1981 cttgtttctt ctttgcacac aagtacttaa caaaccacaa ccagcagccc ctcagctctc
     2041 aggccctgga catgtatgta ccttctgaaa agtccccaga tctccgaagg tcacagtctc
     2101 agaaacaatt tgcaaatggt aaaatcacac ccctgctaga atgtgaggcc aatcagctgc
     2161 tgtggacggt ctggagcagc cccatattcc acagctggga ttaaaatgaa aacatattcc
     2221 cataatattt ctgtgttttt caaaggaaca aaaattctca ctactgagtc atgacacctt
     2281 tgggtgtcaa aagatccttt tacagggttg cctaagacca ttcgagaaaa tatattcact
     2341 ttatgattca taacagtaga aagattatag ctatgaaata atgctgaaaa taatctgatg
     2401 gctggggtca ccacaacatg aactttatta aagggttgca ggattgggaa ggttgagaac
     2461 ctctgaggta gaagtagcga tatctgaatt tggaaccagc ctggtctaca taacaacctc
     2521 taggccagtc agggaggcat agtgagagct tatctcaaaa gcaaaacagc agtcttacta
     2581 tgtagccctg gatgacctac aactccctag gtagtagacc aggttggcct caacctcaga
     2641 gatctgcctg tcttttcctc ctgcatgatc ctacatgccc accctagaag actcttggta
     2701 actcagaccc tagtcatggc ccttccacct ggtctatctt tgggggcact ttttaagaca
     2761 ctgagttcac caagcacctt caagagcctg gacacactgc ttgtccccat tcccattcac
     2821 agacaggaat taaccttcct tctccttggc acatgcaggc tacctgactg ctatggtggc
     2881 ctttcagata gagactgcag gtgccagtgc cagccttgag ctgactgatg gccactctcc
     2941 ttaagctggc agatggctta gtggctaagg gtgcttgtgg agcctgatga cccagggcag
     3001 agcaggaact ggttcccaca ggttccctcc tcacctccat ttgctgtggt acatgcacat
     3061 tcacagaaat gcaaataaaa agatttttta accctta
//
