LOCUS       NM_001108077            1378 bp    mRNA    linear   ROD 17-JUL-2023
DEFINITION  Rattus norvegicus actin-like 9 (Actl9), mRNA.
ACCESSION   NM_001108077 XM_001079116 XM_234946
VERSION     NM_001108077.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1378)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 1378)
  AUTHORS   Strausberg RL, Feingold EA, Grouse LH, Derge JG, Klausner RD,
            Collins FS, Wagner L, Shenmen CM, Schuler GD, Altschul SF, Zeeberg
            B, Buetow KH, Schaefer CF, Bhat NK, Hopkins RF, Jordan H, Moore T,
            Max SI, Wang J, Hsieh F, Diatchenko L, Marusina K, Farmer AA, Rubin
            GM, Hong L, Stapleton M, Soares MB, Bonaldo MF, Casavant TL,
            Scheetz TE, Brownstein MJ, Usdin TB, Toshiyuki S, Carninci P,
            Prange C, Raha SS, Loquellano NA, Peters GJ, Abramson RD, Mullahy
            SJ, Bosak SA, McEwan PJ, McKernan KJ, Malek JA, Gunaratne PH,
            Richards S, Worley KC, Hale S, Garcia AM, Gay LJ, Hulyk SW,
            Villalon DK, Muzny DM, Sodergren EJ, Lu X, Gibbs RA, Fahey J,
            Helton E, Ketteman M, Madan A, Rodrigues S, Sanchez A, Whiting M,
            Madan A, Young AC, Shevchenko Y, Bouffard GG, Blakesley RW,
            Touchman JW, Green ED, Dickson MC, Rodriguez AC, Grimwood J,
            Schmutz J, Myers RM, Butterfield YS, Krzywinski MI, Skalska U,
            Smailus DE, Schnerch A, Schein JE, Jones SJ and Marra MA.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from CH474088.2.
            
            On or before Oct 4, 2007 this sequence version replaced
            XM_234946.4, XM_001079116.1.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1378
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="7"
                     /map="7q11"
     gene            1..1378
                     /gene="Actl9"
                     /gene_synonym="Actl9a; RGD1306886"
                     /note="actin-like 9"
                     /db_xref="GeneID:314659"
                     /db_xref="RGD:1306886"
     exon            1..1378
                     /gene="Actl9"
                     /gene_synonym="Actl9a; RGD1306886"
                     /inference="alignment:Splign:2.1.0"
     CDS             74..1321
                     /gene="Actl9"
                     /gene_synonym="Actl9a; RGD1306886"
                     /note="actin-like 9A"
                     /codon_start=1
                     /product="actin-like protein 9"
                     /protein_id="NP_001101547.1"
                     /db_xref="GeneID:314659"
                     /db_xref="RGD:1306886"
                     /translation="MDVNGYPKPQPSPETHGPPSLTSNTVLVSKNLEQDSFSVVGDRF
                     PLKTGAVVIDMGTGTCKVGFAGQSQPTYSVATILGCQPKKQATKGQSELETFIGEAAR
                     SRPELRLVKPIRNGIVVDWEAAELIWRHILEHDLRVATQEHPLLFSDPPFSPATNREK
                     LVEVAFESLHSPALYVASQSVLSVYAHGRVNGLVVDTGHGVSYTVPVVQGYNLPHAIQ
                     RLDLAGNHLTAFLAEMILGSGFSLQQEDLDLVENIKHHYCYLASDFQKEQARPDQECK
                     QTLRLPDGRTVTLGKELFQCPELLFHPPEIPGLSPMGLPAMAEQSLLRVPQDLRPHVA
                     QNVILCGGSSLFTGLESRFRAELLRSLSPEDHVVVMAQPNRNLSVWIGGSILASLHAF
                     QSCWVLREQYEEMGPQVVYRKCY"
ORIGIN      
        1 cagccttttc tactggcacc tagagtgaag aggtccactt tgttaaacag cattaggagg
       61 ccagctgcag cccatggatg tcaatggata cccaaagccc cagccctccc ccgaaactca
      121 tgggcctcct tccctgacct ctaacacagt cctggtgagc aagaatctag agcaagattc
      181 cttcagtgtg gtgggagaca ggttcccact gaaaacaggt gctgtggtta ttgacatggg
      241 cacaggcacc tgtaaggtag gctttgcagg acaatcccaa cccacctact cggtggccac
      301 catcctgggt tgccagccca agaaacaggc taccaagggc caatcggagc tggaaacttt
      361 tattggggag gcagcccgct cccgcccaga actgaggttg gtgaagccta ttcgcaatgg
      421 cattgtggtg gactgggaag cagccgaact aatatggcga cacatcctgg aacatgatct
      481 ccgagtagcc acccaagagc accctctact gttttcggat ccacccttca gccctgccac
      541 caaccgagag aagctagtag aggtggcctt tgagtctctg cactccccag ccttgtatgt
      601 ggcctctcaa tctgtattgt cagtctatgc tcacggacgt gttaacggac tcgttgtgga
      661 cactggccac ggagtcagct acacagtgcc agttgttcag ggttacaact taccccatgc
      721 catccaacgc ttggacctgg caggcaacca tcttactgcc ttcctagcag aaatgatcct
      781 gggctctggc ttctcattgc aacaggagga cctggacttg gtggagaaca tcaaacatca
      841 ttactgctat ttggcctcag atttccaaaa ggaacaggcc cgcccagatc aggagtgcaa
      901 gcaaactctg aggcttcctg atggacggac tgttactctg ggaaaagagt tattccagtg
      961 tccagagctc ctattccatc ccccagagat tccaggatta tcgcccatgg gcctcccagc
     1021 catggctgaa cagagcctcc tcagggtgcc tcaagatcta cggccccatg tggcccagaa
     1081 tgtgatctta tgtggaggct cctcactctt caccggcctg gagagtcgct tcagggcaga
     1141 gctgctacgt tctctgtccc ctgaggacca cgtagtggtc atggcacagc ccaacaggaa
     1201 tctttcagtg tggatcgggg gctccatttt ggcctcacta catgctttcc agtcctgttg
     1261 ggtcctgcgg gaacaatatg aagaaatggg accccaggtt gtataccgaa aatgctacta
     1321 acatgggaca aggagggaag ggctaagggc agtaaagctt tcttgaaaag caaactct
//
