LOCUS       NM_001419489            2624 bp    mRNA    linear   ROD 01-APR-2024
DEFINITION  Rattus norvegicus acyl-CoA synthetase bubblegum family member 3
            (Acsbg3), mRNA.
ACCESSION   NM_001419489 XM_006244323
VERSION     NM_001419489.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2624)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000009.1.
            
            On Apr 4, 2023 this sequence version replaced XM_006244323.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR26360181.1323997.1,
                                           SRR26360181.2002005.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on manual assertion, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-149               JAXUCZ010000009.1  1802744-1802892
            150-462             JAXUCZ010000009.1  1803396-1803708
            463-689             JAXUCZ010000009.1  1804035-1804261
            690-778             JAXUCZ010000009.1  1806977-1807065
            779-899             JAXUCZ010000009.1  1807494-1807614
            900-980             JAXUCZ010000009.1  1808116-1808196
            981-1130            JAXUCZ010000009.1  1808482-1808631
            1131-1337           JAXUCZ010000009.1  1808721-1808927
            1338-1519           JAXUCZ010000009.1  1809262-1809443
            1520-1753           JAXUCZ010000009.1  1809551-1809784
            1754-1971           JAXUCZ010000009.1  1810605-1810822
            1972-2111           JAXUCZ010000009.1  1810954-1811093
            2112-2358           JAXUCZ010000009.1  1812414-1812660
            2359-2624           JAXUCZ010000009.1  1814496-1814761
FEATURES             Location/Qualifiers
     source          1..2624
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="9"
                     /map="9q11"
     gene            1..2624
                     /gene="Acsbg3"
                     /note="acyl-CoA synthetase bubblegum family member 3"
                     /db_xref="GeneID:316124"
                     /db_xref="RGD:1595856"
     exon            1..149
                     /gene="Acsbg3"
                     /inference="alignment:Splign:2.1.0"
     exon            150..462
                     /gene="Acsbg3"
                     /inference="alignment:Splign:2.1.0"
     CDS             327..2444
                     /gene="Acsbg3"
                     /codon_start=1
                     /product="uncharacterized protein LOC316124"
                     /protein_id="NP_001406418.1"
                     /db_xref="GeneID:316124"
                     /db_xref="RGD:1595856"
                     /translation="MTDPREQGYHRSIAPLLKTKTILRNKIHSTISKKAQAGNLEAMS
                     SGLNYWTSKREGQVQLRMGKNPLENEPPVTVPDLIMSAATKYSHYLAIGSKYKKSWQV
                     LTYIEYYEACRRAAKAFLKVGLERFHGVGIMGINSSEWVIASIGAIMAGGISVGILSS
                     NSPKACQIIAETSEMDIFVVDNDRQLQKVNQIQGYLKHLKAIIQYREDIQEVQPNLYS
                     WKGFLDLADGISDEKLDQIIDAQKPNQCCALVYNQGTTGNPKAIMLSHDNITWTTAAT
                     VQSLGYKCPPHGQEILVSYLPLCFAGIQILDVWVAISVAGTVYFPSLESGKWSGLPRV
                     SGTGFLMELLREVQPTTFCGIPWVWDRMLDSLKTKHLDSTAFRRKIDRWAMRMGLSTN
                     KRQMMGGIHQPLCFGLAKRLTFKPAKKFLGLNHCEQFLNVGMGLPRSTLDFFLSMNIP
                     ILELYGLSECTGLHTLSSLQAYRILSSGKALPKTHTKVEKENQDGVGNLCIWGRHVFM
                     GYLRDKHSTERKVDNHGWLHTNDLGFLDFDKYLYVTGNTNDLIRLNSGEMVNPIPIEE
                     RVRTRIPLVRYAMLVGQDAPYLCALLTLKCQINPETGEAQGNLTSEAIACCRKLRSQS
                     TWLSDVLYNRDPLVTQFIDQGIQDVNSEAPSVGAKIIKWVILDNDFSVDGGELGPMSK
                     MNRSTVIKIYKEEIQKLYETSTS"
     exon            463..689
                     /gene="Acsbg3"
                     /inference="alignment:Splign:2.1.0"
     exon            690..778
                     /gene="Acsbg3"
                     /inference="alignment:Splign:2.1.0"
     exon            779..899
                     /gene="Acsbg3"
                     /inference="alignment:Splign:2.1.0"
     exon            900..980
                     /gene="Acsbg3"
                     /inference="alignment:Splign:2.1.0"
     exon            981..1130
                     /gene="Acsbg3"
                     /inference="alignment:Splign:2.1.0"
     exon            1131..1337
                     /gene="Acsbg3"
                     /inference="alignment:Splign:2.1.0"
     exon            1338..1519
                     /gene="Acsbg3"
                     /inference="alignment:Splign:2.1.0"
     exon            1520..1753
                     /gene="Acsbg3"
                     /inference="alignment:Splign:2.1.0"
     exon            1754..1971
                     /gene="Acsbg3"
                     /inference="alignment:Splign:2.1.0"
     exon            1972..2111
                     /gene="Acsbg3"
                     /inference="alignment:Splign:2.1.0"
     exon            2112..2358
                     /gene="Acsbg3"
                     /inference="alignment:Splign:2.1.0"
     exon            2359..2624
                     /gene="Acsbg3"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aatgttctgg agaacatcca gtctggggac tgcttgtccc cctgtggcta cagtgggagg
       61 tggtgagata gctggacagg agtcaccact gccataccaa ttgataaagt ggcaggaaac
      121 gcctggcagc tgtccacaag gcacagaagc ccccactcct ggcatcccct tgtcccctgg
      181 tctgtgagct tcctgtcttt ccctggccga ctccaccacc atccacattc ctttcgagga
      241 gccaaatacc ctactgtgta cagctagtcc tctgccccct gtaattgtgt gtgtgaacat
      301 tggtgtattg ggtccgcgtt gtggggatga ctgaccctag ggaacaaggt taccatagga
      361 gcatcgcgcc tctcctgaaa acaaaaacca tcttgaggaa caaaattcac agcacgatat
      421 caaagaaggc acaagcagga aacttggagg cgatgagctc aggtctcaac tactggacat
      481 ctaagcggga aggccaggtg cagctgcgca tgggcaagaa cccattagag aacgagcctc
      541 cggtcacagt gccggacttg atcatgagcg cggccacaaa gtactcacac tacctggcga
      601 tcggctccaa gtacaagaag agctggcagg tgcttaccta catcgagtac tacgaggcct
      661 gccggcgcgc tgccaaggcc ttcctcaagg tgggcctgga gcgtttccat ggtgtgggca
      721 tcatgggaat caattcctcg gagtgggtga ttgccagtat tggagctatc atggcaggtg
      781 gcatctctgt gggcatcttg agcagcaact ctcccaaggc ctgccaaatc atcgctgaga
      841 cctcagaaat ggatatcttt gtggtcgata atgacagaca gctgcagaag gttaaccaga
      901 tccagggcta cttgaaacat ctcaaggcca tcatacagta cagagaagat atccaggaag
      961 tgcagccaaa tttatactcg tggaaagggt tcctggacct tgcagacggc atctcagatg
     1021 aaaaactgga ccagatcatc gatgcacaga agcccaatca gtgctgtgct ttggtataca
     1081 accaaggtac cacaggaaac ccaaaggcca taatgctgag tcatgacaat atcacatgga
     1141 ccacagcagc cactgttcaa agccttgggt acaagtgtcc acctcatggc caggagatcc
     1201 ttgtgagcta cctgccactc tgctttgctg gaatccagat cttggatgtt tgggtggcaa
     1261 tctccgtggc tgggacagtc tatttcccct cactagagtc agggaagtgg agtgggctac
     1321 cacgagtctc tggcacgggc ttcctgatgg agttgctccg cgaggtccag cccaccacgt
     1381 tctgcggcat cccgtgggtg tgggaccgta tgctggacag tctgaagacc aaacacctgg
     1441 actccaccgc cttccgcagg aagattgacc gctgggccat gcgcatgggc ctcagtacca
     1501 acaagaggca gatgatgggg gggatccacc agccgctgtg cttcggcctg gctaagagat
     1561 tgaccttcaa gccggccaag aagttcctgg gtctcaacca ctgcgagcag tttctaaacg
     1621 tgggcatggg gctgccgagg agcacgctgg atttcttcct cagcatgaac attcctatct
     1681 tggagttgta cggcttgtca gagtgcacgg gactgcacac tctgtctagc ctccaggctt
     1741 accggatact gagctctggg aaggcacttc ccaaaaccca cacaaaggtg gaaaaggaaa
     1801 accaggatgg agtcgggaat ttgtgcatct ggggccgcca cgtattcatg gggtacctca
     1861 gagacaagca tagcacagaa aggaaggtgg acaaccatgg ctggctacac acgaacgacc
     1921 tgggcttctt ggatttcgac aaatacctct atgtcacggg gaacactaac gatttgatca
     1981 gactgaactc aggggaaatg gtcaacccga tccccatcga ggagcgggtg aggacccgaa
     2041 tcccccttgt gcgttatgcc atgctggtgg gccaggatgc cccgtacctg tgcgctctcc
     2101 tcacattaaa gtgtcaaata aatccagaaa ctggagaggc tcagggtaac ctgaccagtg
     2161 aggctatagc ttgctgtcgg aaacttcgaa gccagtccac ctggttgtca gatgtcctat
     2221 ataaccgtga ccctttggtc acacagttca ttgaccaggg catccaggat gtgaattcgg
     2281 aggcgccctc agtgggcgcc aagatcatta agtgggtcat tctagacaac gatttctctg
     2341 tggacggcgg ggagcttgga cccatgagca agatgaacag gtccactgtg atcaagatat
     2401 acaaggagga aatccagaaa ctttatgaga cttcaacctc ctaggaaccc catgcacccc
     2461 aatcttcatt caagtgctgg cacttcgtct ccttcatcct gcttaccggg ggacaatttc
     2521 tacaatggag ggagggatcc ctgtgaggac cctgggcaga aaggcacatt ctgccctcta
     2581 gagttggtat ttgaattgta aagaaattaa atgtgttcac taaa
//
