LOCUS       NM_001013960            1698 bp    mRNA    linear   ROD 26-FEB-2024
DEFINITION  Rattus norvegicus acyl-CoA thioesterase 9 (Acot9), mRNA; nuclear
            gene for mitochondrial product.
ACCESSION   NM_001013960 XM_217610
VERSION     NM_001013960.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1698)
  AUTHORS   Hunt MC, Yamada J, Maltais LJ, Wright MW, Podesta EJ and Alexson
            SE.
  TITLE     A revised nomenclature for mammalian acyl-CoA
            thioesterases/hydrolases
  JOURNAL   J Lipid Res 46 (9), 2029-2032 (2005)
   PUBMED   16103133
REFERENCE   2  (bases 1 to 1698)
  AUTHORS   Poupon V, Begue B, Gagnon J, Dautry-Varsat A, Cerf-Bensussan N and
            Benmerah A.
  TITLE     Molecular cloning and characterization of MT-ACT48, a novel
            mitochondrial acyl-CoA thioesterase
  JOURNAL   J Biol Chem 274 (27), 19188-19194 (1999)
   PUBMED   10383425
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC085822.1.
            
            On Apr 20, 2005 this sequence version replaced XM_217610.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC085822.1, SRR8487231.46107.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMD00132261,
                                           SAMD00132262 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            gene product(s) localized to mito. :: inferred from homology
            RefSeq Select criteria             :: based on conservation,
                                                  expression, longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1698
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="X"
                     /map="Xq21"
     gene            1..1698
                     /gene="Acot9"
                     /gene_synonym="Acate2"
                     /note="acyl-CoA thioesterase 9"
                     /db_xref="GeneID:302640"
                     /db_xref="RGD:1359188"
     exon            1..106
                     /gene="Acot9"
                     /gene_synonym="Acate2"
                     /inference="alignment:Splign:2.1.0"
     CDS             87..1406
                     /gene="Acot9"
                     /gene_synonym="Acate2"
                     /note="acyl-Coenzyme A thioesterase 2, mitochondrial"
                     /codon_start=1
                     /product="acyl-coenzyme A thioesterase 9, mitochondrial"
                     /protein_id="NP_001013982.1"
                     /db_xref="GeneID:302640"
                     /db_xref="RGD:1359188"
                     /translation="MKRAAMRLWTLNKGLLTHGRGLAYGSENKICKPLHIQEVRNKLR
                     EIVGVSTIWRDHVKAMEERKLLHNFLATSQKALPPRKMKDSYIEVLLPLGSDPDLRDK
                     YLTVQNTVRFGRILEDLDSLGVLVCYMHNQNHSTKMSPLSIVTVLVDKIDMCKYSLSP
                     EQDIKFTGHVSWVGKTSMEVKMKMFQMHSDDKFWPVLDATFVMVARDSENKGPAFVNP
                     LVPENKEEEELITQGELNKSRRIAFSTTSLLKVAPNSEERNVIHELFLNTLDPKTISF
                     QSRILPPKAVWMEDTKLKSLDICHPQERNIFNRIFGGFLMRKAYELAWATACSFGGSR
                     PYVVTVDDIMFQKPVEVGSLLFLSSQVCFTQDNYIQVRVHSEVASLDSREHMTTNVFH
                     FTFMSEKEVPLIFPKTYGESMLYLDGQRHFKSMSTPVILKKNYTVEP"
     exon            107..201
                     /gene="Acot9"
                     /gene_synonym="Acate2"
                     /inference="alignment:Splign:2.1.0"
     exon            202..247
                     /gene="Acot9"
                     /gene_synonym="Acate2"
                     /inference="alignment:Splign:2.1.0"
     exon            248..418
                     /gene="Acot9"
                     /gene_synonym="Acate2"
                     /inference="alignment:Splign:2.1.0"
     exon            419..456
                     /gene="Acot9"
                     /gene_synonym="Acate2"
                     /inference="alignment:Splign:2.1.0"
     exon            457..540
                     /gene="Acot9"
                     /gene_synonym="Acate2"
                     /inference="alignment:Splign:2.1.0"
     exon            541..644
                     /gene="Acot9"
                     /gene_synonym="Acate2"
                     /inference="alignment:Splign:2.1.0"
     exon            645..721
                     /gene="Acot9"
                     /gene_synonym="Acate2"
                     /inference="alignment:Splign:2.1.0"
     exon            722..789
                     /gene="Acot9"
                     /gene_synonym="Acate2"
                     /inference="alignment:Splign:2.1.0"
     exon            790..901
                     /gene="Acot9"
                     /gene_synonym="Acate2"
                     /inference="alignment:Splign:2.1.0"
     exon            902..992
                     /gene="Acot9"
                     /gene_synonym="Acate2"
                     /inference="alignment:Splign:2.1.0"
     exon            993..1078
                     /gene="Acot9"
                     /gene_synonym="Acate2"
                     /inference="alignment:Splign:2.1.0"
     exon            1079..1166
                     /gene="Acot9"
                     /gene_synonym="Acate2"
                     /inference="alignment:Splign:2.1.0"
     exon            1167..1317
                     /gene="Acot9"
                     /gene_synonym="Acate2"
                     /inference="alignment:Splign:2.1.0"
     exon            1318..1623
                     /gene="Acot9"
                     /gene_synonym="Acate2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctcacgctca cgctcttctg tctcccgttt gtctctctat acgggaggac gttggttgtc
       61 ctcccgtggg taggcagtgg agtgccatga agcgggcagc gatgcgtctt tggaccttga
      121 acaaggggct tcttacacat ggcagaggac tggcttacgg atctgaaaac aaaatatgta
      181 aacctttaca catacaggaa gttcgaaata agctgcggga gatcgtaggc gtatccacaa
      241 tctggagaga ccatgtaaaa gcaatggagg aaaggaagtt acttcataat tttttggcta
      301 catcacagaa agccctacca ccgaggaaaa tgaaggacag ttacattgaa gtcctcctgc
      361 ctttgggttc tgaccctgat ctacgagaca aatatttgac tgttcaaaat acagtgagat
      421 ttggcaggat tcttgaggac cttgatagct taggagttct tgtttgctac atgcacaacc
      481 aaaatcattc taccaagatg tctccattat caatcgttac agtcctggtg gacaagattg
      541 atatgtgtaa atacagctta agccctgaac aggacattaa gttcactggc catgttagct
      601 gggttggaaa gacttccatg gaagtgaaga tgaaaatgtt tcagatgcac agtgatgata
      661 aattttggcc tgttttggat gcaacctttg taatggtggc tcgagattct gaaaataaag
      721 ggcctgcatt tgtaaatcca cttgttcctg aaaataaaga agaagaagaa cttattacac
      781 aaggagaatt gaacaagagc cgaaggattg cttttagcac cacttcatta ctgaaagtag
      841 ctcctaattc tgaggagagg aatgtcatac atgaactgtt tcttaacaca ctggatccaa
      901 agactataag ttttcagagt cgaattttgc ctcctaaggc agtgtggatg gaggatacaa
      961 aactcaagag cttggatatt tgtcaccctc aggagcgaaa cattttcaat aggatttttg
     1021 gtggttttct tatgagaaaa gcatatgaac ttgcatgggc tacagcttgt agttttggtg
     1081 gttcccggcc atatgtggta acagtagatg atatcatgtt tcagaaacct gttgaagttg
     1141 gctcattgct ctttctttct tcacaggtat gcttcaccca ggacaattac attcaagtca
     1201 gagtccatag tgaagtggcc tctcttgaca gtcgtgagca tatgaccacc aatgtctttc
     1261 attttacatt catgtcagaa aaagaagtac ccttgatttt ccccaaaaca tatggagagt
     1321 ccatgttgta tttagatgga cagcggcatt tcaagtccat gagtacccca gtgatcttga
     1381 aaaagaacta cactgtggag ccctaggaaa aatctcactt gttgcaaatc agcacttcag
     1441 gcacagtgac atagtgccta ataaaggcat gctgagaaat attgatgttc acattgcttt
     1501 tttatcttcc atagagggga ctatattcaa cttttagaat gatcagaaaa gcagaacaag
     1561 tgactgaatg gggctaaggg gtgaaagaat gattaaacaa taaaaccttt tatagtaatg
     1621 tgaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
     1681 aaaaaaaaaa aaaaaaaa
//
