LOCUS       XM_039104169            1475 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus acyl-CoA thioesterase 8 (Acot8),
            transcript variant X3, mRNA.
ACCESSION   XM_039104169
VERSION     XM_039104169.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039104169.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1475
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1475
                     /gene="Acot8"
                     /gene_synonym="Pte1"
                     /note="acyl-CoA thioesterase 8; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 10
                     ESTs, 4 long SRA reads, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 60 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:170588"
                     /db_xref="RGD:70368"
     CDS             641..1351
                     /gene="Acot8"
                     /gene_synonym="Pte1"
                     /codon_start=1
                     /product="acyl-coenzyme A thioesterase 8 isoform X3"
                     /protein_id="XP_038960097.1"
                     /db_xref="GeneID:170588"
                     /db_xref="RGD:70368"
                     /translation="METEGDPKVPVLYHVERTRTGASFSVRAVKAVQHGKAIFICQAS
                     FQQMQPSPLQHQFSMPTVPPPEELLDHEALIDQYLRDPNLHEKYRVGLNRIAAREVPI
                     EIKLVNPPALNQLQTLEPKQMFWVRARGYIGDGDIKMHCCVAAYISDYAFLGTALLPH
                     QSKYKVNFMVSLDHSMWFHAPFRADHWMLYECESPWAGGSRGLVHGRLWRRDGVLAVT
                     CAQEGVIRSKPRVSESKL"
ORIGIN      
        1 tttccgcgtt tctctcatct gcagcaagca gtgaaaatgt caaagccaga ggacctagga
       61 gatgctaatg gcgacgccga ccgcggcgac ctttccgggg acctgcgtag tgtgctggtc
      121 accagcgtgc tcaacctcga gcctctagat gaagatctct acagaggaag gcattactgg
      181 gtacctacct cccagcggct ctttgggggt cagattgtgg gccaggctct ggtggctgca
      241 gccaagtccg tgagtgaaga cgtccacgtg cactccctgc actgctactt tgtccgggca
      301 ggcattggat accctggaat ttggagttac aagggattgt gagccaccat gcaggtggta
      361 ggaacctaac accggtcgtc cgcaagagca gacagcgttg ttaactgatg agacctcacc
      421 ttcctcgatt ttgttgttgt tttgagtcag ggtctctcta tgtagcgtga ctggcccgaa
      481 actcaccatt cagaccaggg cggcctggaa ctcacagagc tctgcctgcc tctggctccc
      541 gagtgtttcg gactaagggc ctgcgacgcc acacctggct ctcttcttta ttctcttcta
      601 gtgtcagcac tgctaagtcc tcatagggct gtaaactgct atggagacag aaggggaccc
      661 aaaggtgcca gtgctgtacc atgtggagag gacacgaaca ggagcaagct tctcagtgcg
      721 tgcagtgaag gctgtgcagc atggcaaggc catcttcatc tgccaggcct ccttccagca
      781 gatgcagccc agccccctgc agcaccagtt ctccatgccc actgtgcccc ccccagagga
      841 gctgctggac catgaggccc tcattgacca gtacttaagg gatcctaacc ttcatgagaa
      901 atatcgagtg gggctgaacc gaattgctgc ccgagaggtg cctattgaga tcaagctggt
      961 gaacccaccc gccctgaacc agctgcagac actggagccc aaacagatgt tctgggtgcg
     1021 agcccggggc tatattgggg acggcgacat caagatgcac tgctgtgtgg ctgcttacat
     1081 ctctgactac gccttcctgg ggacggcact gctgcctcac cagtccaagt ataaagtgaa
     1141 cttcatggtc tcgctggacc actccatgtg gttccacgcc ccattccgtg ctgaccactg
     1201 gatgctctac gagtgtgaga gcccctgggc tggtggctct cgagggctgg tacatgggcg
     1261 gctgtggcgt cgggatgggg tccttgctgt gacctgtgcc caggagggtg tgatccgatc
     1321 gaagcctcgg gtatccgaga gtaaactata gttggagatt aactcgctcg cctggggctc
     1381 taaggactct ttctgctgcc attcctttgg cagaggtcac agttgagctg ggcttcctgc
     1441 ctcttacatc caataaagag attgctaaca ctgga
//
