LOCUS       NM_001079709            1888 bp    mRNA    linear   ROD 17-JUL-2023
DEFINITION  Rattus norvegicus acyl-CoA thioesterase 5 (Acot5), mRNA.
ACCESSION   NM_001079709 XM_001055644 XM_578572
VERSION     NM_001079709.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1888)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC128770.1.
            
            On or before Dec 11, 2006 this sequence version replaced
            XM_578572.2, XM_001055644.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC128770.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5756307, SAMEA5760393
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..1888
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /map="6q31"
     gene            1..1888
                     /gene="Acot5"
                     /gene_synonym="RGD1565917"
                     /note="acyl-CoA thioesterase 5"
                     /db_xref="GeneID:503049"
                     /db_xref="RGD:1565917"
     exon            1..930
                     /gene="Acot5"
                     /gene_synonym="RGD1565917"
                     /inference="alignment:Splign:2.1.0"
     CDS             474..1739
                     /gene="Acot5"
                     /gene_synonym="RGD1565917"
                     /EC_number="3.1.2.2"
                     /codon_start=1
                     /product="acyl-coenzyme A thioesterase 5"
                     /protein_id="NP_001073177.1"
                     /db_xref="GeneID:503049"
                     /db_xref="RGD:1565917"
                     /translation="MVPVVSLEPDSHSCWDEPLSITVRGLAPEQPVTLHSALRDEKGA
                     LFRAHARYRADAHGELDLERAPALGGSFTGLEPMGLIWAMEPERPFWRLVKRDVQTPF
                     VVELEVLDGHEPDGRRLLAQAVHERHFMAPGVRRVPVREGRVRATLFLPPGTGPFPGI
                     IDLFGIGGGLLEYRASLLAAKGFAVMALAYFKYDDLPKATDILRLEYFEEAVNYLLGH
                     PQVKGPGIGLLGISKGAELCLSMASFLNGITAAVIINGSMVNVAGTLYYKEESLPASS
                     MNLERIRVTKDGFKDIIDILTVPPEGPDQKSIIPVERSDTTFLFLVSQDDRNWKSEFY
                     AREASKRLQAHGKKTPQIICYPEAGHYIEPPYFPWSKAAPNSLFDMPIILGGEPRAHA
                     MAQVDAWQQLQIFFHKHLSGDKKTIPGKL"
     exon            931..1133
                     /gene="Acot5"
                     /gene_synonym="RGD1565917"
                     /inference="alignment:Splign:2.1.0"
     exon            1134..1863
                     /gene="Acot5"
                     /gene_synonym="RGD1565917"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gactcatgca cttaccttcc gaagccttta aatagcttga gtcacaattt caccctgggt
       61 agtcttgact cctcactgta ccccaggtca agcttccttc tcagattgca taaggtacta
      121 cagtaaggaa caacccaaga aagaaaggtt caaggccaag tttctcagga ttgccagatg
      181 agagtaacct aaacctaagg ggttcttttg taaagctata caggtcgggg gtaatgatct
      241 atgcaactca atctttgtac ctctatttca acatcagctt gagaaaacat gatcattact
      301 attgcttagc tcttctgcat acaggccact ggtatcccat aaactgcggg gagtttcaca
      361 ccgcaattgc catggcaagt aagtaggaca agggttcctt ccttgtcaca ggctccagaa
      421 gtcgagagac actattcact ccacagtatt ctgatttttt ttactgtgtc aatatggtgc
      481 cagtagtgag cctggagccc gacagccaca gttgctggga cgagccccta agcattactg
      541 tgcgtggcct ggcccccgag cagcctgtca cactacactc ggccctgcgc gacgagaagg
      601 gcgcgctctt ccgagcccac gcgcgctacc gcgctgatgc ccacggagag ctggacctgg
      661 agcgcgcgcc cgcgctgggc ggcagcttca cggggctcga gcccatgggg ctgatctggg
      721 ccatggaacc cgaacggcct ttctggcgtc tggtcaagcg cgacgtgcag acgcccttcg
      781 tggtggagct ggaggtgctg gacggacacg agccggacgg tcggcggctg ctggcgcagg
      841 cggtgcacga gcgtcacttc atggctccag gggtgcggcg cgtgcccgtg cgcgagggcc
      901 gggtgcgcgc cacgctcttc ctgcctccag gaactggacc ctttcctgga atcatagacc
      961 tttttggaat tggaggtgga cttctggaat atagggcgag tctgctggct gcaaagggct
     1021 ttgccgtcat ggctctggct tattttaagt atgatgacct ccctaaggct acagacatcc
     1081 ttcgtctgga gtactttgaa gaagctgtga actacctgct tggtcaccct caggtcaagg
     1141 gtccaggaat tggcctgctg gggatttcca aaggggctga actctgcctc tccatggcct
     1201 ctttcctgaa cggcatcacg gccgctgtca taatcaatgg ctccatggtc aatgttgctg
     1261 gaacactata ctacaaggaa gagagtctgc ctgcttcgag catgaatcta gaacgaatca
     1321 gggtgaccaa agatgggttt aaagatatta tagatatcct gactgtccct ccagaaggtc
     1381 cagaccagaa aagcatcatc cctgtggaaa ggtctgacac gaccttcctg ttcctcgtta
     1441 gtcaggatga ccgcaactgg aagagcgagt tctatgccag agaggcctcc aaacgcttgc
     1501 aggcccatgg gaagaaaaca ccccagatca tctgctaccc agaagcaggg cactatattg
     1561 agccccctta cttcccttgg tccaaggctg cccccaactc cctttttgac atgcctatca
     1621 tccttggagg ggagcctagg gctcatgcca tggcccaggt ggacgcttgg cagcaactcc
     1681 agattttttt ccacaaacat ttgagtgggg acaagaagac aatcccagga aaactgtgat
     1741 tttctttggg tagtgacatt tctggtactg acccatccta agaatagctg tacctgttag
     1801 gatgtgttta caggtttgtt tttttttttc cttttaataa agtcttgaag agtccctccc
     1861 tccaaaaaaa aaaaaaaaaa aaaaaaaa
//
