LOCUS       XM_006234580            3345 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus 1-aminocyclopropane-1-carboxylate
            synthase (Accs), transcript variant X3, mRNA.
ACCESSION   XM_006234580
VERSION     XM_006234580.4
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051338.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006234580.5.
            
            On Jan 21, 2021 this sequence version replaced XM_006234580.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3345
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..3345
                     /gene="Accs"
                     /gene_synonym="RGD1309314"
                     /note="1-aminocyclopropane-1-carboxylate synthase; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 9 ESTs, 1 long SRA read, 9 Proteins, and 100% coverage
                     of the annotated genomic feature by RNAseq alignments,
                     including 56 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:311218"
                     /db_xref="RGD:1309314"
     CDS             251..1678
                     /gene="Accs"
                     /gene_synonym="RGD1309314"
                     /codon_start=1
                     /product="1-aminocyclopropane-1-carboxylate synthase-like
                     protein 1 isoform X1"
                     /protein_id="XP_006234642.2"
                     /db_xref="GeneID:311218"
                     /db_xref="RGD:1309314"
                     /translation="MESGYGDDLQGECLRKPDQKQPKLYGVGDPTATFSSDSFCLSSR
                     GRVIKWFWDSAEEGYRTYHMDEYDEDKNPSGIINLGTSENKLCFDLLSWRLTQNDMLH
                     VEPSLLQYPDWRGHRFLRKEVARFLSFYCKSPAPLKPENVVVLNGCASLFSALATVLC
                     EPGEVLLIPTPYYGAITQHIYLYGNIRLAYVYLDSKVTGLNTRPFQLTVEKLEMALQG
                     VNSEGVKVKGLILINPQNPLGDIYSPEELQDFLGFAMRHKLHVIMDEVYMLSVFEESL
                     GYRSVLSLERLPDPQRTHVMWATSKDFGMSGLRFGVLYTENQHVATAVASLCRYHGLS
                     GLVQHQMAQLLQDHDWISQVYLPENHARLKAAHTYVSEELRALGIPFVSRGAGFFIWV
                     DLRKYLREGTFEEEAMLWRRFLDNKVLLSSGKTFECKEPGWFRVVFSDKENRLRLGMQ
                     RMRQVLKGQSQMVEDASRCHTQELQ"
ORIGIN      
        1 tttgggatag accggattga ctgcagtgcc ttacactcct gccgggttct gtgtgagctc
       61 tggtctatgc cacgttgcct actccgtggt gtttttcctc ggatcgaggc tgtctgtgga
      121 gcaggcgtgt gctctgccaa agtaccgcca ccttggggag gacccaggat ttgcagcaaa
      181 aatattctgt cttcctcaga aggactccac ggtacctact acctgcacag gctcagcctc
      241 cactcaggac atggaaagtg gctatggtga tgatctgcaa ggagaatgcc tcagaaaacc
      301 agaccagaaa cagcccaaac tctatggagt gggtgacccc acggccacat tctcctctga
      361 cagcttctgc ctgtcctcta gaggaagagt catcaaatgg ttctgggact cggctgagga
      421 gggctatagg acctaccaca tggatgagta tgatgaggac aagaacccca gtggcatcat
      481 taacttgggc accagtgaga acaaactctg ctttgacctt ctgtcctggc ggctgacaca
      541 gaatgacatg cttcatgtgg agccatctct gctgcagtac cctgactgga gagggcatcg
      601 gttcctccgg aaagaagtgg caaggttctt gtctttctat tgtaagagcc cggcacccct
      661 caaaccagaa aatgtggttg ttctgaatgg ctgtgcctct ctcttttctg ctctggccac
      721 agtgctgtgc gagccaggag aagtcctctt gatccccacc ccttactacg gagccatcac
      781 ccagcacatc tatctctatg gcaacatccg actagcctat gtctacctgg acagcaaggt
      841 aactggactg aatacacgtc ccttccagct caccgtagag aagctggaga tggccctgca
      901 aggagttaac tctgagggtg tcaaggttaa aggcctcatc ctcatcaacc cccaaaaccc
      961 tctgggtgat atctactccc ctgaagagct gcaggacttc ctgggatttg ccatgaggca
     1021 caagctgcat gtgatcatgg atgaggttta catgctgtct gtttttgaag agtctcttgg
     1081 gtaccgcagt gtcctcagcc tggaaaggct gcccgacccc cagagaacac atgtgatgtg
     1141 ggccaccagc aaggactttg ggatgtctgg gcttcgcttt ggtgtcctgt acacagaaaa
     1201 ccagcacgtg gctactgccg tggcctccct ctgccgctat catggcctca gtggtctggt
     1261 ccaacaccag atggcacagc tgctccagga ccatgactgg atcagccagg tgtacctgcc
     1321 agaaaaccat gcccggctca aggctgccca cacctatgtc tcagaggagc tcagggccct
     1381 ggggatcccc tttgtgagtc gtggggcagg tttcttcatc tgggttgact tgagaaagta
     1441 cctgcgcgaa ggcacctttg aggaggaggc gatgctctgg cgccgatttt tggacaacaa
     1501 ggtgctgctg tcctctggta agacctttga gtgcaaagaa cccggctggt tccgcgtggt
     1561 cttctcggac aaggagaacc ggctccgcct gggaatgcaa aggatgcggc aggtgcttaa
     1621 agggcaatct caaatggtag aagatgcctc tcgctgtcac acccaggagc tacaatagcc
     1681 agtccagatg agctggccat tgcctctcaa gtagccactg tccctgtgac ctggccatgt
     1741 agggctacgg gagacttgag tgtggatgcc ccatttgtca gtgggattca ccacttggct
     1801 ttggcctcga aggactgttt cctgccccct gctggcagtg ggagtctgtt taaactgata
     1861 ttcattttgg gctgttgctg actcatattc aacaggatta ggatcagccg gatgactgtt
     1921 gtgaatagtg tacagtatgg agagtcgtga cttctcctta tcacagctcc tttctaggac
     1981 acaagagtaa aaaagcaacg ttcattcttt gagatggtgc cgtcctgcct tttctttttc
     2041 tttttgccag ggaaacaagc cagaggatca gcacacacca cacacacaca cacacaaaca
     2101 cacacacaca cacacacaca cacacacaca cacacacaca cacacacgga gagtgataac
     2161 attccgagga tgatgtttta aagcatgatc caatgattgg aatgaattct gtttattcgg
     2221 gtctttggag cccaggagag gcctcgactt gggatgcaga gagaaatatt tcatggtggg
     2281 tgttaggagg aactcctcag tggagatgaa atgtcccctc aaattcagga ctcacttctt
     2341 acctaggaag gagatgcctt cattgctgcc cccaaagaca tggcctagca atggctaggg
     2401 aaggggaggg actggaggct gtatttctca accaaggctc tctgggttgt gctaagaaaa
     2461 ccgacaaagg gggctgcctg ttccatttga ggggtgcttt agtgaagatt ccaaataaat
     2521 gtctgattgg tggcctgcag tacagtacct atagtcacac ctgcaggagc agctgaggca
     2581 ggaggattcc ttgcacttgt gagtttgaga tcagctagga caggagtggc gggtgcaact
     2641 taaacagtga aatcagaaaa ttactacaga cccagaatga gctcattacg ggtgtgtcag
     2701 taaatcatca tagctcaggc tggcctagac ggtcagttgt gccttgcagg cgtccatcac
     2761 tgtgctcagg ataccttctc acagatgagg aaaccgagtc ttagatggaa taatattccg
     2821 aacctcatgg ctacaaactc tcagggtcag gacccaagta agagtggttt gctttagttc
     2881 tgaatctgaa tgtggtgggt tggagagatg gctcggtgct taagaacatt tgcttttctt
     2941 ctgaggactc tagttcccac agcgggcagc tcataaccat ctgtgactcc agttccaggg
     3001 atctaattcc cctgtggccc tgtggcactg cgcgcgcgtg tgcgcacgcg cgcgcgcgca
     3061 cacacacaca cacacacaca cacacacaca atcataaagt ggaatttcat cacgtgtact
     3121 gttttaattg tgtattcttt ctgctgtttt cttggttggt ctgtagattg actacttttc
     3181 tgttttgtgg gttttctctg tcattagttt acttttcttt cctttccttg gatttttctg
     3241 gatttcccct cttcatcttc tactcacttg taccgtatac actgtatttt cctgctcgct
     3301 gttaccctag aatataacac ctccaaacaa cttgttaata ggaaa
//
