LOCUS       NM_001267534            1936 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus 1-aminocyclopropane-1-carboxylate synthase
            (Accs), mRNA.
ACCESSION   NM_001267534 XM_001074505 XM_001078618
VERSION     NM_001267534.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1936)
  AUTHORS   Fragoza,R., Das,J., Wierbowski,S.D., Liang,J., Tran,T.N., Liang,S.,
            Beltran,J.F., Rivera-Erick,C.A., Ye,K., Wang,T.Y., Yao,L., Mort,M.,
            Stenson,P.D., Cooper,D.N., Wei,X., Keinan,A., Schimenti,J.C.,
            Clark,A.G. and Yu,H.
  TITLE     Extensive disruption of protein interactions by genetic variants
            across the allele frequency spectrum in human populations
  JOURNAL   Nat Commun 10 (1), 4141 (2019)
   PUBMED   31515488
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1936)
  AUTHORS   Koch,K.A., Capitani,G., Gruetter,M.G. and Kirsch,J.F.
  TITLE     The human cDNA for a homologue of the plant enzyme
            1-aminocyclopropane-1-carboxylate synthase encodes a protein
            lacking that activity
  JOURNAL   Gene 272 (1-2), 75-84 (2001)
   PUBMED   11470512
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC083866.1.
            
            [WARNING] On Aug 9, 2024 this sequence was replaced by
            NM_001267534.2.
            
            On or before May 31, 2012 this sequence version replaced
            XM_001074505.2, XM_001078618.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC083866.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMD00132261,
                                           SAMD00132262 [ECO:0006172]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..1936
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3q31"
     gene            1..1936
                     /gene="Accs"
                     /gene_synonym="RGD1309314"
                     /note="1-aminocyclopropane-1-carboxylate synthase"
                     /db_xref="GeneID:311218"
                     /db_xref="RGD:1309314"
     exon            1..77
                     /gene="Accs"
                     /gene_synonym="RGD1309314"
                     /inference="alignment:Splign:2.1.0"
     exon            78..368
                     /gene="Accs"
                     /gene_synonym="RGD1309314"
                     /inference="alignment:Splign:2.1.0"
     CDS             147..1574
                     /gene="Accs"
                     /gene_synonym="RGD1309314"
                     /note="1-aminocyclopropane-1-carboxylate synthase homolog"
                     /codon_start=1
                     /product="1-aminocyclopropane-1-carboxylate synthase-like
                     protein 1"
                     /protein_id="NP_001254463.1"
                     /db_xref="GeneID:311218"
                     /db_xref="RGD:1309314"
                     /translation="MESGYGDDLQGECLRKPDQKQPKLYGVGDPTATFSSDSFCLSSR
                     GRVIKWFWDSAEEGYRTYHMDEYDEDKNPSGIINLGTSENKLCFDLLSWRLTQNDMLH
                     VEPSLLQYPDWRGHRFLRKEVARFLSFYCKSPAPLKPENVVVLNGCASLFSALATVLC
                     EPGEVLLIPTPYYGAITQHIYLYGNIRLAYVYLDSKVTGLNTRPFQLTVEKLEMALQG
                     VNSEGVKVKGLILINPQNPLGDIYSPEELQDFLGFAMRHKLHVIMDEVYMLSVFEESL
                     GYRSVLSLERLPDPQRTHVMWATSKDFGMSGLRFGVLYTENQHVATAVASLCRYHGLS
                     GLVQHQMAQLLQDHDWISQVYLPENHARLKAAHTYVSEELRALGIPFVSRGAGFFIWV
                     DLRKYLREGTFEEEAMLWRRFLDNKVLLSSGKTFECKEPGWFRVVFSDKENRLRLGMQ
                     RMRQVLKGQSQMVEDASRCHTQELQ"
     exon            369..428
                     /gene="Accs"
                     /gene_synonym="RGD1309314"
                     /inference="alignment:Splign:2.1.0"
     exon            429..499
                     /gene="Accs"
                     /gene_synonym="RGD1309314"
                     /inference="alignment:Splign:2.1.0"
     exon            500..569
                     /gene="Accs"
                     /gene_synonym="RGD1309314"
                     /inference="alignment:Splign:2.1.0"
     exon            570..636
                     /gene="Accs"
                     /gene_synonym="RGD1309314"
                     /inference="alignment:Splign:2.1.0"
     exon            637..734
                     /gene="Accs"
                     /gene_synonym="RGD1309314"
                     /inference="alignment:Splign:2.1.0"
     exon            735..812
                     /gene="Accs"
                     /gene_synonym="RGD1309314"
                     /inference="alignment:Splign:2.1.0"
     exon            813..913
                     /gene="Accs"
                     /gene_synonym="RGD1309314"
                     /inference="alignment:Splign:2.1.0"
     exon            914..1003
                     /gene="Accs"
                     /gene_synonym="RGD1309314"
                     /inference="alignment:Splign:2.1.0"
     exon            1004..1049
                     /gene="Accs"
                     /gene_synonym="RGD1309314"
                     /inference="alignment:Splign:2.1.0"
     exon            1050..1191
                     /gene="Accs"
                     /gene_synonym="RGD1309314"
                     /inference="alignment:Splign:2.1.0"
     exon            1192..1334
                     /gene="Accs"
                     /gene_synonym="RGD1309314"
                     /inference="alignment:Splign:2.1.0"
     exon            1335..1488
                     /gene="Accs"
                     /gene_synonym="RGD1309314"
                     /inference="alignment:Splign:2.1.0"
     exon            1489..1908
                     /gene="Accs"
                     /gene_synonym="RGD1309314"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cactacagac tctgtggttc cggaaaaccc gggcgggccc tgcagaccat tctgtcttgg
       61 ttgccagttt tgggctgata ttctgtcttc ctcagaagga ctccacggta cctactacct
      121 gcacaggctc agcctccact caggacatgg aaagtggcta tggtgatgat ctgcaaggag
      181 aatgcctcag aaaaccagac cagaaacagc ccaaactcta tggagtgggt gaccccacgg
      241 ccacattctc ctctgacagc ttctgcctgt cctctagagg aagagtcatc aaatggttct
      301 gggactcggc tgaggagggc tataggacct accacatgga tgagtatgat gaggacaaga
      361 accccagtgg catcattaac ttgggcacca gtgagaacaa actctgcttt gaccttctgt
      421 cctggcggct gacacagaat gacatgcttc atgtggagcc atctctgctg cagtaccctg
      481 actggagagg gcatcggttc ctccggaaag aagtggcaag gttcttgtct ttctattgta
      541 agagcccggc acccctcaaa ccagaaaatg tggttgttct gaatggctgt gcctctctct
      601 tttctgctct ggccacagtg ctgtgcgagc caggagaagt cctcttgatc cccacccctt
      661 actacggagc catcacccag cacatctatc tctatggcaa catccgacta gcctatgtct
      721 acctggacag caaggtaact ggactgaata cacgtccctt ccagctcacc gtagagaagc
      781 tggagatggc cctgcaagga gttaactctg agggtgtcaa ggttaaaggc ctcatcctca
      841 tcaaccccca aaaccctctg ggtgatatct actcccctga agagctgcag gacttcctgg
      901 gatttgccat gaggcacaag ctgcatgtga tcatggatga ggtttacatg ctgtctgttt
      961 ttgaagagtc tcttgggtac cgcagtgtcc tcagcctgga aaggctgccc gacccccaga
     1021 gaacacatgt gatgtgggcc accagcaagg actttgggat gtctgggctt cgctttggtg
     1081 tcctgtacac agaaaaccag cacgtggcta ctgccgtggc ctccctctgc cgctatcatg
     1141 gcctcagtgg tctggtccaa caccagatgg cacagctgct ccaggaccat gactggatca
     1201 gccaggtgta cctgccagaa aaccatgccc ggctcaaggc tgcccacacc tatgtctcag
     1261 aggagctcag ggccctgggg atcccctttg tgagtcgtgg ggcaggtttc ttcatctggg
     1321 ttgacttgag aaagtacctg cgcgaaggca cctttgagga ggaggcgatg ctctggcgcc
     1381 gatttttgga caacaaggtg ctgctgtcct ctggtaagac ctttgagtgc aaagaacccg
     1441 gctggttccg cgtggtcttc tcggacaagg agaaccggct ccgcctggga atgcaaagga
     1501 tgcggcaggt gcttaaaggg caatctcaaa tggtagaaga tgcctctcgc tgtcacaccc
     1561 aggagctaca atagccagtc cagatgagct ggccattgcc tctcaagtag ccactgtccc
     1621 tgtgacctgg ccatgtaggg ctacgggaga cttgagtgtg gatgccccat ttgtcagtgg
     1681 gattcaccac ttggctttgg cctcgaagga ctgtttcctg ccccctgctg gcagtgggag
     1741 tctgtttaaa ctgatattca ttttgggctg ttgctgactc atattcaaca ggattaggat
     1801 cagccggatg actgttgtga atagtgtaca gtatggagag tcgtgacttc tccttatcac
     1861 agctcctttc taggacacaa gagtaaaaaa gcaacgttca ttctttgaaa aaaaaaaaaa
     1921 aaaaaaaaaa aaaaaa
//
