LOCUS       NM_001012013            1816 bp    mRNA    linear   ROD 24-JUN-2024
DEFINITION  Rattus norvegicus acyl-CoA binding domain containing 4 (Acbd4),
            mRNA.
ACCESSION   NM_001012013 XM_221005
VERSION     NM_001012013.1
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1816)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 1816)
  AUTHORS   Gerhard,D.S., Wagner,L., Feingold,E.A., Shenmen,C.M., Grouse,L.H.,
            Schuler,G., Klein,S.L., Old,S., Rasooly,R., Good,P., Guyer,M.,
            Peck,A.M., Derge,J.G., Lipman,D., Collins,F.S., Jang,W., Sherry,S.,
            Feolo,M., Misquitta,L., Lee,E., Rotmistrovsky,K., Greenhut,S.F.,
            Schaefer,C.F., Buetow,K., Bonner,T.I., Haussler,D., Kent,J.,
            Kiekhaus,M., Furey,T., Brent,M., Prange,C., Schreiber,K.,
            Shapiro,N., Bhat,N.K., Hopkins,R.F., Hsie,F., Driscoll,T.,
            Soares,M.B., Casavant,T.L., Scheetz,T.E., Brown-stein,M.J.,
            Usdin,T.B., Toshiyuki,S., Carninci,P., Piao,Y., Dudekula,D.B.,
            Ko,M.S., Kawakami,K., Suzuki,Y., Sugano,S., Gruber,C.E.,
            Smith,M.R., Simmons,B., Moore,T., Waterman,R., Johnson,S.L.,
            Ruan,Y., Wei,C.L., Mathavan,S., Gunaratne,P.H., Wu,J., Garcia,A.M.,
            Hulyk,S.W., Fuh,E., Yuan,Y., Sneed,A., Kowis,C., Hodgson,A.,
            Muzny,D.M., McPherson,J., Gibbs,R.A., Fahey,J., Helton,E.,
            Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M.,
            Madari,A., Young,A.C., Wetherby,K.D., Granite,S.J., Kwong,P.N.,
            Brinkley,C.P., Pearson,R.L., Bouffard,G.G., Blakesly,R.W.,
            Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J.,
            Myers,R.M., Butterfield,Y.S., Griffith,M., Griffith,O.L.,
            Krzywinski,M.I., Liao,N., Morin,R., Palmquist,D., Petrescu,A.S.,
            Skalska,U., Smailus,D.E., Stott,J.M., Schnerch,A., Schein,J.E.,
            Jones,S.J., Holt,R.A., Baross,A., Marra,M.A., Clifton,S.,
            Makowski,K.A., Bosak,S. and Malek,J.
  CONSRTM   MGC Project Team
  TITLE     The status, quality, and expansion of the NIH full-length cDNA
            project: the Mammalian Gene Collection (MGC)
  JOURNAL   Genome Res 14 (10B), 2121-2127 (2004)
   PUBMED   15489334
  REMARK    Erratum:[Genome Res. 2006 Jun;16(6):804. Morrin, Ryan [corrected to
            Morin, Ryan]]
REFERENCE   3  (bases 1 to 1816)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC076387.1.
            
            On Feb 11, 2005 this sequence version replaced XM_221005.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC076387.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132263, SAMD00132264
                                           [ECO:0000348]
            ##Evidence-Data-END##
FEATURES             Location/Qualifiers
     source          1..1816
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /map="10q32.1"
     gene            1..1816
                     /gene="Acbd4"
                     /note="acyl-CoA binding domain containing 4"
                     /db_xref="GeneID:303577"
                     /db_xref="RGD:1308404"
     exon            1..251
                     /gene="Acbd4"
                     /inference="alignment:Splign:2.1.0"
     exon            252..370
                     /gene="Acbd4"
                     /inference="alignment:Splign:2.1.0"
     CDS             289..1269
                     /gene="Acbd4"
                     /note="acyl-Coenzyme A binding domain containing 4"
                     /codon_start=1
                     /product="acyl-CoA-binding domain-containing protein 4"
                     /protein_id="NP_001012013.1"
                     /db_xref="GeneID:303577"
                     /db_xref="RGD:1308404"
                     /translation="MGTEKEEPDCQKQFQAAVSVIQNLPKNGSYRPSYEEMLRFYSYY
                     KQATAGPCLVPRPGFWDPIGRYKWDAWNSLGKMSREEAMSAYITEMKLVAQKVIDTVP
                     LGEVAEDMFGYFEPLYQVIPDMPRPPETFLRRVTGWQEPAVNRDVQAAPEPSHPPKEP
                     APPSPESRLPRDLDLEVFCDSVEQLEPELVRVPVLSPVPAESELPHLHTGTGDSAQRV
                     WAEQKEAAGRELTTRSSPESPEGFGGSLMGPQELDRWLVGTVQAMQESMKDVHRRLQI
                     LESKPQPLEQQRSPRTRPWPLGLSTPTLLFFILWPFVVQWLFRQFRTQRR"
     exon            371..491
                     /gene="Acbd4"
                     /inference="alignment:Splign:2.1.0"
     exon            492..576
                     /gene="Acbd4"
                     /inference="alignment:Splign:2.1.0"
     exon            577..697
                     /gene="Acbd4"
                     /inference="alignment:Splign:2.1.0"
     exon            698..784
                     /gene="Acbd4"
                     /inference="alignment:Splign:2.1.0"
     exon            785..1006
                     /gene="Acbd4"
                     /inference="alignment:Splign:2.1.0"
     exon            1007..1146
                     /gene="Acbd4"
                     /inference="alignment:Splign:2.1.0"
     exon            1147..1787
                     /gene="Acbd4"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtgtcctggc agtggacgcc cggggtgagt gagaggccgt ggcgcgggga gccagggtgg
       61 aaagctgttt gtcccatcct gactcctcct cgctcgctga ttcgcccgtt caggaattgg
      121 aaatgggcac ctagagaggt gcatctgggg acgtttgtgg tggctctgag acccttgcca
      181 cctgcttctc ctcccactca tggccaagct ggtgattctc gccaccccgg ccccattgac
      241 gctgccttga gagttgctcc agagtagggc tccagagctt ggagcagcat gggcaccgag
      301 aaggaagagc ccgactgtca aaaacagttc caggcagcag tcagcgtcat tcagaacctg
      361 cctaagaatg gctcttaccg cccctcctat gaagagatgc tgcgattcta cagctactac
      421 aagcaggcta ccgcggggcc ctgcctggtc ccccgacctg ggttctggga ccccattgga
      481 cgttacaagt gggatgcctg gaacagcctg gggaagatga gcagggagga agccatgtcc
      541 gcctacatca cggagatgaa gctggtggca cagaaggtga tcgacacagt gcccctgggc
      601 gaggtggcag aggatatgtt tggttatttc gagcccctgt accaggtgat cccggacatg
      661 ccgaggccgc cagaaacctt cttgagaagg gtcacaggtt ggcaagagcc agcggtgaat
      721 agagacgttc aggctgctcc agagccttct catcccccca aggagccagc acctccaagt
      781 ccagagtccc ggctaccaag agacttggac ctggaggttt tctgtgactc cgtggagcag
      841 ctagagccag agttggtgag agtgcctgtc ttgtcccctg ttcctgctga atccgagttg
      901 ccccacctcc acactgggac cggggactct gctcagaggg tttgggcaga gcagaaggaa
      961 gccgctggca gagagctcac caccaggagc agccccgagt cccccgaggg gtttggaggc
     1021 agcctgatgg gcccccagga gttggacaga tggctggtgg ggacagtcca ggccatgcag
     1081 gaaagcatga aggacgttca caggaggcta cagatcctgg agagcaagcc ccagccactt
     1141 gagcagcaga ggtcgcccag gactcggcct tggcccctag ggctctcgac tcccacgctg
     1201 ctcttcttta tcctgtggcc cttcgttgtc cagtggctct tccgacagtt tcggacccag
     1261 aggaggtgat tcaaggaccg ggtctctcta gcaactgaga agaccgaagg tcctgctgtg
     1321 ccctgagcct ccctaggttt aggaaaacaa ctttttgaaa ttcccctccc atgctcgttc
     1381 accctggcac tcccttcttt aatgggggct cccacaagac ccatctatcc ctgcagctca
     1441 cacctacgcc ccgagttccc aaagcagtca cggtgcacat tctaactttg gggttggcag
     1501 tgagccggcc ccaccctccg ggtcacctga ctttgctccc gcagactcgg ctccctgccg
     1561 aggctcaact cttgggcaag ttgggacttg gacctggcct gaagactgat tggctggaag
     1621 gttggttaca ggaaatgccg gagccctctg gagtggggag gaatgggagg agtgtatagg
     1681 ctgggggctg ggatgccctg aacacacgca caagtacaca tcgctctcag gacttcactg
     1741 aagattcacg tgcaattgaa cacttcatta aacaaaagaa aacctcaaaa aaaaaaaaaa
     1801 aaaaaaaaaa aaaaaa
//
