LOCUS       XM_039099780            1419 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus acetyl-CoA acetyltransferase 2-like 1
            (Acat2l1), transcript variant X3, mRNA.
ACCESSION   XM_039099780
VERSION     XM_039099780.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051336.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1419
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..1419
                     /gene="Acat2l1"
                     /note="acetyl-CoA acetyltransferase 2-like 1; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 2 ESTs, 1 Protein, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 18 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:365096"
                     /db_xref="RGD:1562948"
     CDS             458..1384
                     /gene="Acat2l1"
                     /codon_start=1
                     /product="acetyl-CoA acetyltransferase, cytosolic-like
                     isoform X2"
                     /protein_id="XP_038955708.1"
                     /db_xref="GeneID:365096"
                     /db_xref="RGD:1562948"
                     /translation="MICGSGLKAVCLAAQSIAMGDSTIVVAGGMENMSKAPHLAHLRS
                     GVKMGEVPLADSILCDGLTDAFHNYHMGITAENVAKKWQVSREAQDRVAVVSQNRAEH
                     AQKAGHFDKEIVPVHVSSRKGLAEVKIDEFPRHGSNLEAMSKLKPYFLTDGTGTVTSA
                     NATGMNDGAAAVVLMKKTEAESRMLKPLAQVVSWSQAGVEPSVMGVGPIPAIKQAVAK
                     AGWSLPDVDVFEINEAYAALSVAIAKELGLNPEKVNIDGGAIALGHPLGASGCRILVT
                     LLHTLERVGGTRGVAALCIGGGMGIAMCVQRG"
ORIGIN      
        1 ggggaggcct taggctcctc tcctgctcag ctccaactct gcaaagtttg cttcaactgc
       61 agccagagct gtgctgacgc gtgtggagta gcaggatgaa cagaagttcc gacccggagg
      121 tcaccgtctc ggcggctcgt tcctccattg gtcagtgtcc cggaggcacc ctacaggtgc
      181 gcagagaacc cggccaactg cccgcgtgca ttcatgattg ttcatctctg accgtgtggt
      241 ggcaggttcc ttcagtggtg ccctgttcac cgtgcctgtc cacgacctgg ggacaactgt
      301 catcaaagaa gtcctgcaga gggccaaggt ggctccggaa gaggtgtcag aggtcatatt
      361 tggacacgtt ttgaccgcag gctgtgggca gaatcctact cgacaagcca gtgtgggtgc
      421 ggggatcccc tactcggtgc cagcatggag ctgccagatg atctgtggct cgggcctaaa
      481 agccgtgtgc cttgcagctc agtccatagc catgggtgac tccaccatcg tggttgctgg
      541 aggcatggag aacatgagca aggcccctca cttggctcac ctgagatcag gagtgaagat
      601 gggtgaggtg ccactcgccg acagcatcct ctgtgatggc ctcacagatg cgtttcacaa
      661 ctaccacatg ggcatcacag ctgaaaacgt agccaaaaaa tggcaagtga gcagagaggc
      721 ccaggacagg gttgccgttg tgtcccagaa tagggcggag catgcgcaga aagctggcca
      781 ctttgacaag gagattgtgc cagtgcacgt gtcttctaga aaaggtcttg ctgaagtgaa
      841 aatcgatgag tttcctcgtc atgggagtaa ccttgaagcc atgagcaagc tgaaacctta
      901 ctttcttact gatgggactg gaacggtcac atctgctaat gcaacaggaa tgaacgatgg
      961 cgccgctgct gtggttctta tgaagaagac tgaagctgag agtcggatgc tgaaaccttt
     1021 agcacaagtg gtctcctggt cacaagccgg tgtggagcct tctgtcatgg gcgtaggacc
     1081 gattccagcc ataaagcaag ctgttgcaaa ggcaggctgg tccctacctg atgttgatgt
     1141 gtttgaaatc aacgaggcct atgcagctct ctctgttgca atagccaaag agcttggatt
     1201 aaaccccgag aaggtgaaca tcgatggagg agccattgcc ttgggacatc ctctgggagc
     1261 atctggctgt aggattctag tgaccttgtt acacaccctg gagagagtgg gtgggactcg
     1321 tggtgttgca gccctgtgca ttgggggtgg gatggggatc gcaatgtgtg ttcagagagg
     1381 gtgagccacc acccttacag ttctcattca aacactaaa
//
