LOCUS       NM_001398790            3711 bp    mRNA    linear   ROD 22-SEP-2024
DEFINITION  Rattus norvegicus acyl-CoA dehydrogenase family, member 10
            (Acad10), mRNA.
ACCESSION   NM_001398790 XM_039090162
VERSION     NM_001398790.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 3711)
  AUTHORS   Morgenstern,M., Peikert,C.D., Lubbert,P., Suppanz,I., Klemm,C.,
            Alka,O., Steiert,C., Naumenko,N., Schendzielorz,A., Melchionda,L.,
            Muhlhauser,W.W.D., Knapp,B., Busch,J.D., Stiller,S.B.,
            Dannenmaier,S., Lindau,C., Licheva,M., Eickhorst,C., Galbusera,R.,
            Zerbes,R.M., Ryan,M.T., Kraft,C., Kozjak-Pavlovic,V., Drepper,F.,
            Dennerlein,S., Oeljeklaus,S., Pfanner,N., Wiedemann,N. and
            Warscheid,B.
  TITLE     Quantitative high-confidence human mitochondrial proteome and its
            dynamics in cellular context
  JOURNAL   Cell Metab 33 (12), 2464-2483 (2021)
   PUBMED   34800366
REFERENCE   2  (bases 1 to 3711)
  AUTHORS   Mootha,V.K., Bunkenborg,J., Olsen,J.V., Hjerrild,M.,
            Wisniewski,J.R., Stahl,E., Bolouri,M.S., Ray,H.N., Sihag,S.,
            Kamal,M., Patterson,N., Lander,E.S. and Mann,M.
  TITLE     Integrated analysis of protein composition, tissue diversity, and
            gene regulation in mouse mitochondria
  JOURNAL   Cell 115 (5), 629-640 (2003)
   PUBMED   14651853
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000012.1.
            
            On Dec 23, 2021 this sequence version replaced XM_039090162.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC168650.1, SRR26360194.938528.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760386
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-204               JAXUCZ010000012.1  40561915-40562118
            205-404             JAXUCZ010000012.1  40566701-40566900
            405-553             JAXUCZ010000012.1  40572034-40572182
            554-748             JAXUCZ010000012.1  40574658-40574852
            749-907             JAXUCZ010000012.1  40576653-40576811
            908-1067            JAXUCZ010000012.1  40577767-40577926
            1068-1209           JAXUCZ010000012.1  40579313-40579454
            1210-1278           JAXUCZ010000012.1  40582220-40582288
            1279-1460           JAXUCZ010000012.1  40583862-40584043
            1461-1611           JAXUCZ010000012.1  40585895-40586045
            1612-1757           JAXUCZ010000012.1  40588344-40588489
            1758-1931           JAXUCZ010000012.1  40590504-40590677
            1932-2332           JAXUCZ010000012.1  40591163-40591563
            2333-2473           JAXUCZ010000012.1  40593767-40593907
            2474-2611           JAXUCZ010000012.1  40594174-40594311
            2612-2702           JAXUCZ010000012.1  40594410-40594500
            2703-2861           JAXUCZ010000012.1  40597586-40597744
            2862-3034           JAXUCZ010000012.1  40598816-40598988
            3035-3178           JAXUCZ010000012.1  40602444-40602587
            3179-3256           JAXUCZ010000012.1  40603211-40603288
            3257-3449           JAXUCZ010000012.1  40603721-40603913
            3450-3711           JAXUCZ010000012.1  40604117-40604378
FEATURES             Location/Qualifiers
     source          1..3711
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="12"
                     /map="12q16"
     gene            1..3711
                     /gene="Acad10"
                     /gene_synonym="RGD1310159"
                     /note="acyl-CoA dehydrogenase family, member 10"
                     /db_xref="GeneID:304500"
                     /db_xref="RGD:1310159"
     exon            1..204
                     /gene="Acad10"
                     /gene_synonym="RGD1310159"
                     /inference="alignment:Splign:2.1.0"
     exon            205..404
                     /gene="Acad10"
                     /gene_synonym="RGD1310159"
                     /inference="alignment:Splign:2.1.0"
     CDS             218..3427
                     /gene="Acad10"
                     /gene_synonym="RGD1310159"
                     /EC_number="1.2.1.3"
                     /note="acyl-Coenzyme A dehydrogenase family, member 10"
                     /codon_start=1
                     /product="acyl-CoA dehydrogenase family member 10"
                     /protein_id="NP_001385719.1"
                     /db_xref="GeneID:304500"
                     /db_xref="RGD:1310159"
                     /translation="MCIRRLFQPSSIHWAWRTTAPKHPLSRHQGIPRWTYSRGRSYRA
                     VIFDMGGVLMPSPGTVAAGWEVQNHVPPGTIMKALIRGGDSGPWMRFMKGEMTMERFL
                     EEFGRLCSEIAKTSVPVSSFFSLLTSEHVAKQFPVMTQAVSQIRAEGLQTAVLTNNFL
                     LSNGKSFLPLDRKQFDVVVESCVEGVCKPDPRIFQLCLQRLNLQPSQAIFLDDLGPNV
                     KVAASLGIRTIKVDNPETAVKELEDLLGFPLHGGVPNTRPVRKTMEIPQDALETYLKG
                     LLGTRYTGPMKLLQFDHGQSNPTYYIRLADRQLVLRKKPPGTLLPSAHAIEREFRIMK
                     ALGDAGVPVPTVLDLCSDSSIIGTPFYLMEYCPGIIYKDPSLPGLEPSRREAIYTAMN
                     QVLCRIHSVDLQATGLDGFGKQGDYISRQVQTWTKQYRAAETSSIPAMERLIQWLPLH
                     LPQQQRTTVVHGDFRLDNLMFRPEKAEVLAVLDWELSTLGDPFADVAYSCLAHYLPSS
                     FPMLRGFRDQDVRELGIPTVEEYFRMYCLNMGIPPIDNWNFYMAFSFFRVAAILQGVY
                     KRLLTGQASSATAGQSGKLTESMAELAWDFAIKEGFRVFKAMPATTTLTRSYHAWAGP
                     RLPRTPTGSRSHSTTVAASPSHEAKGGLIISPEGLSPRVRKLYDQLLQFMEQKVYPVE
                     TELQRHQASADRWSPSPLIEDLKEKAQAEGLWNLFLPLETDPERKYGAGLTNVEYAHL
                     CEVMGMSLYASEIFNCSAPDTGNMEILVRYGTEEQKARWLAPLLEGRIRSCFAMTEPQ
                     VASSDASNIEASIKEEDGSYVINGHKWWISGILDPRCKLCVFMGKTDPQAPRHQQQSM
                     LLVPMDTPGIKVIRPLSVFGLEDPPGGHGEVQFKDVRVPKENILLGPGRGFEIAQGRL
                     GPGRIHHCMRLIGYSERALELMKTRVMSRTAFGKPLVEHGTILADIARSRVDIEQARL
                     LVLKAAHLMDVAGNKAAALEIAMIKMVAPSMAYRVIDRAVQAFGAAGLSSDYPLAQFF
                     GWARALRFADGPDEVHQLTVAKMELKGRSRLQEPAAPRV"
     exon            405..553
                     /gene="Acad10"
                     /gene_synonym="RGD1310159"
                     /inference="alignment:Splign:2.1.0"
     exon            554..748
                     /gene="Acad10"
                     /gene_synonym="RGD1310159"
                     /inference="alignment:Splign:2.1.0"
     exon            749..907
                     /gene="Acad10"
                     /gene_synonym="RGD1310159"
                     /inference="alignment:Splign:2.1.0"
     exon            908..1067
                     /gene="Acad10"
                     /gene_synonym="RGD1310159"
                     /inference="alignment:Splign:2.1.0"
     exon            1068..1209
                     /gene="Acad10"
                     /gene_synonym="RGD1310159"
                     /inference="alignment:Splign:2.1.0"
     exon            1210..1278
                     /gene="Acad10"
                     /gene_synonym="RGD1310159"
                     /inference="alignment:Splign:2.1.0"
     exon            1279..1460
                     /gene="Acad10"
                     /gene_synonym="RGD1310159"
                     /inference="alignment:Splign:2.1.0"
     exon            1461..1611
                     /gene="Acad10"
                     /gene_synonym="RGD1310159"
                     /inference="alignment:Splign:2.1.0"
     exon            1612..1757
                     /gene="Acad10"
                     /gene_synonym="RGD1310159"
                     /inference="alignment:Splign:2.1.0"
     exon            1758..1931
                     /gene="Acad10"
                     /gene_synonym="RGD1310159"
                     /inference="alignment:Splign:2.1.0"
     exon            1932..2332
                     /gene="Acad10"
                     /gene_synonym="RGD1310159"
                     /inference="alignment:Splign:2.1.0"
     exon            2333..2473
                     /gene="Acad10"
                     /gene_synonym="RGD1310159"
                     /inference="alignment:Splign:2.1.0"
     exon            2474..2611
                     /gene="Acad10"
                     /gene_synonym="RGD1310159"
                     /inference="alignment:Splign:2.1.0"
     exon            2612..2702
                     /gene="Acad10"
                     /gene_synonym="RGD1310159"
                     /inference="alignment:Splign:2.1.0"
     exon            2703..2861
                     /gene="Acad10"
                     /gene_synonym="RGD1310159"
                     /inference="alignment:Splign:2.1.0"
     exon            2862..3034
                     /gene="Acad10"
                     /gene_synonym="RGD1310159"
                     /inference="alignment:Splign:2.1.0"
     exon            3035..3178
                     /gene="Acad10"
                     /gene_synonym="RGD1310159"
                     /inference="alignment:Splign:2.1.0"
     exon            3179..3256
                     /gene="Acad10"
                     /gene_synonym="RGD1310159"
                     /inference="alignment:Splign:2.1.0"
     exon            3257..3449
                     /gene="Acad10"
                     /gene_synonym="RGD1310159"
                     /inference="alignment:Splign:2.1.0"
     exon            3450..3711
                     /gene="Acad10"
                     /gene_synonym="RGD1310159"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgtctggaca cagtattgtc cgaggagcgt gcgcagtccg tgcagagcgt tctggcttgg
       61 tttttttttt tttttttttg cgcttgaccc ctctcttcgt ttgtcccgcc tagttttccc
      121 acagggttca ccgagactct gagggttcga ggagactctg agggttcctg ggtcttcgac
      181 ctcagggttt gtaactttat gcagcctctg tctcaccatg tgcataagga ggctttttca
      241 gccttcctct atccactggg catggaggac cacagccccg aaacatcctc tgagcaggca
      301 tcagggaatc ccacgctgga catattccag aggccgaagc tacagagccg tcatttttga
      361 catgggcgga gtcctcatgc cttctccagg gacagtggct gcgggatggg aggtgcagaa
      421 tcatgtccct cctggaacta taatgaaggc tttgatcaga ggtggcgaca gtgggccctg
      481 gatgaggttt atgaaaggag agatgacaat ggagcgcttc ttggaagagt tcgggaggct
      541 gtgctctgaa atcgcaaaga cctctgtgcc cgtgagctcc tttttctctc tgctgactag
      601 tgagcacgtg gcaaagcagt tcccggtgat gacgcaggct gtctctcaga tccgagcaga
      661 gggcctgcag actgcagtcc tgaccaacaa ttttctgctt tccaacggga aaagcttttt
      721 gcccctggac cggaagcagt ttgatgtggt ggtggagtcc tgcgtggaag gcgtctgtaa
      781 gccagatccc aggatattcc agctgtgcct gcagcgactg aacctgcagc cctcacaggc
      841 catttttctt gatgatctgg gaccaaatgt caaagtggct gccagcctgg gcattcgcac
      901 cattaaggtt gacaatcctg agacggcagt gaaggaactg gaagatcttc tgggtttccc
      961 attgcacggg ggcgttccca acactcgacc tgtgaggaag accatggaga ttccacaaga
     1021 cgccttggag acctacctga agggcttgct ggggacccgc tacactggcc ccatgaagct
     1081 ccttcagttc gatcacggac agtcaaaccc aacatactac atcaggctgg ctgaccgtca
     1141 gctggttctg aggaagaaac cgccaggcac cctccttccc tctgcccatg ccatagaaag
     1201 ggagttcagg atcatgaaag cccttgggga tgcaggagtc cctgtcccca ctgttcttga
     1261 cctttgcagt gactcaagca tcatcggcac ccccttctac ttgatggagt actgcccggg
     1321 catcatctac aaagacccct ccctgccagg cttggagccc agccggcggg aagccatata
     1381 tactgccatg aaccaagtcc tgtgcagaat tcacagtgtg gacctgcagg ccacgggcct
     1441 ggacggcttc gggaagcaag gggactatat ttctcgacag gtgcaaacct ggaccaagca
     1501 gtaccgagca gcggaaacca gcagcatccc ggccatggag cggcttatcc agtggctgcc
     1561 actgcacctt ccccagcaac agaggaccac ggtggtgcac ggtgacttca ggctggacaa
     1621 cctgatgttc cgtcctgaaa aggcggaggt gctcgctgtc ctggactggg agctttccac
     1681 cttaggggac ccctttgctg acgtggccta cagctgcctg gctcactacc tgccgtccag
     1741 ctttcccatg ctcagagggt tcagggacca ggatgtgagg gagctgggca tccccaccgt
     1801 ggaggagtac ttcaggatgt actgtcttaa catgggcatc ccacccatcg acaactggaa
     1861 cttctacatg gctttctctt ttttccgagt ggctgcaatc ctacagggag tctacaagcg
     1921 cttgctcaca ggacaggcca gctctgcaac agccgggcaa agtgggaagc tcactgagtc
     1981 catggctgag ctggcctggg attttgccat caaagaaggg ttccgggttt tcaaagcgat
     2041 gccagccacc acaacactga cgagatccta ccatgcctgg gctgggccac ggctcccgag
     2101 gactcccacg ggctcgagga gtcacagcac tacagtagct gcttccccct ctcatgaggc
     2161 aaagggaggc ctgatcatct ctccagaggg cctgtcccct cgggtcagga agttgtatga
     2221 ccagctgttg cagtttatgg aacagaaggt gtaccccgtg gagacagagc tgcagagaca
     2281 ccaggcctca gccgacaggt ggagcccttc cccgctgata gaagacctca aggagaaagc
     2341 ccaggctgaa gggctttgga accttttcct acccttggag acggatcctg agagaaagta
     2401 cggagcaggg ctgactaatg tggagtacgc acatctgtgt gaagtgatgg gcatgtctct
     2461 gtacgcttct gagatattta attgctctgc cccggatacg gggaacatgg aaatcctggt
     2521 gcgctacggc acggaggagc agaaggcccg ctggctggcg ccactcctgg agggcaggat
     2581 ccgttcctgc ttcgccatga ccgagcccca ggtggcctcc tcagatgcct ccaacatcga
     2641 ggcgtccatc aaagaggaag atggctccta tgtcataaat ggtcacaagt ggtggatctc
     2701 aggtatcctg gatccacgct gcaaactctg tgtgtttatg gggaaaacag acccgcaggc
     2761 cccaaggcac cagcaacagt ctatgctctt ggttcccatg gacacgcccg gaatcaaagt
     2821 catccggcct ctgtcggtgt ttgggttaga ggatcctcca ggtggccatg gtgaagtaca
     2881 gttcaaagat gtgcgtgtgc ctaaggagaa catacttctg ggccctggcc gaggctttga
     2941 gatcgctcag ggcaggctgg ggcccggtcg gattcatcac tgcatgaggt tgatcgggta
     3001 ttcagagagg gccctggaac tcatgaagac acgggtgatg tcccgcacgg ccttcgggaa
     3061 gccccttgtg gagcacggca ccatcctagc agacattgcc cggtctcgtg tggacatcga
     3121 gcaggcacgt ctgctggtac tgaaagctgc ccacctcatg gatgtggccg gaaacaaggc
     3181 tgcagctttg gagatcgcca tgattaaaat ggtagcccct tccatggctt atcgagtaat
     3241 tgaccgcgct gttcaggctt ttggagcagc aggcctcagc agcgactacc ccctggctca
     3301 gttctttggc tgggcccgag ccctgcgctt cgctgacggc cctgatgagg tacaccagct
     3361 gacggtggct aagatggagc tgaagggtcg ctccaggctg caggagccag cagcccccag
     3421 agtgtagatg ctgggtttgc aaaggcctgg ctgtagggat ctggacaccg tgtgctctga
     3481 tctctccaga agcaataagg ctccttcctg gggcttctgg gaaagcagag ggcatagcca
     3541 cagcagatac tgctggaaac tgggatgaag ccaccctgtg cccacatctg gaatacgaat
     3601 tcagaggatt aagatgctct gttggaaagg ggctttgggg atacaaagag tctgtgtact
     3661 tcctgtgtca catgcaggat atggggaata aaggctcgca tagccccgtg a
//
