LOCUS       NM_001025674            1319 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus activator of basal transcription 1 (Abt1), mRNA.
ACCESSION   NM_001025674 XM_001072491 XM_225368
VERSION     NM_001025674.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1319)
  AUTHORS   Baltz,A.G., Munschauer,M., Schwanhausser,B., Vasile,A.,
            Murakawa,Y., Schueler,M., Youngs,N., Penfold-Brown,D., Drew,K.,
            Milek,M., Wyler,E., Bonneau,R., Selbach,M., Dieterich,C. and
            Landthaler,M.
  TITLE     The mRNA-bound proteome and its global occupancy profile on
            protein-coding transcripts
  JOURNAL   Mol Cell 46 (5), 674-690 (2012)
   PUBMED   22681889
REFERENCE   2  (bases 1 to 1319)
  AUTHORS   Castello,A., Fischer,B., Eichelbaum,K., Horos,R., Beckmann,B.M.,
            Strein,C., Davey,N.E., Humphreys,D.T., Preiss,T., Steinmetz,L.M.,
            Krijgsveld,J. and Hentze,M.W.
  TITLE     Insights into RNA biology from an atlas of mammalian mRNA-binding
            proteins
  JOURNAL   Cell 149 (6), 1393-1406 (2012)
   PUBMED   22658674
REFERENCE   3  (bases 1 to 1319)
  AUTHORS   de Planell-Saguer,M., Schroeder,D.G., Rodicio,M.C., Cox,G.A. and
            Mourelatos,Z.
  TITLE     Biochemical and genetic evidence for a role of IGHMBP2 in the
            translational machinery
  JOURNAL   Hum Mol Genet 18 (12), 2115-2126 (2009)
   PUBMED   19299493
REFERENCE   4  (bases 1 to 1319)
  AUTHORS   Oda,T., Kayukawa,K., Hagiwara,H., Yudate,H.T., Masuho,Y.,
            Murakami,Y., Tamura,T.A. and Muramatsu,M.A.
  TITLE     A novel TATA-binding protein-binding protein, ABT1, activates basal
            transcription and has a yeast homolog that is essential for growth
  JOURNAL   Mol Cell Biol 20 (4), 1407-1418 (2000)
   PUBMED   10648625
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC099109.1 and CV121702.1.
            
            On or before Dec 5, 2007 this sequence version replaced
            XM_001072491.1, XM_225368.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC099109.1, EX489012.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMD00132261, SAMD00132262
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1283              BC099109.1         1-1283
            1284-1319           CV121702.1         517-552
FEATURES             Location/Qualifiers
     source          1..1319
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="17"
                     /map="17p11"
     gene            1..1319
                     /gene="Abt1"
                     /note="activator of basal transcription 1"
                     /db_xref="GeneID:306960"
                     /db_xref="RGD:1310785"
     exon            1..295
                     /gene="Abt1"
                     /inference="alignment:Splign:2.1.0"
     CDS             52..858
                     /gene="Abt1"
                     /codon_start=1
                     /product="activator of basal transcription 1"
                     /protein_id="NP_001020845.1"
                     /db_xref="GeneID:306960"
                     /db_xref="RGD:1310785"
                     /translation="MVKVGKLVEEQKAAMEEEKEVNAEAAEELEEAEEASCNGSKKKV
                     VPGIVYLGHVPPRFRPLHVRNLLSVYGEVGRVFFQAEDPFVRRKKKAAAAAGGKKGAK
                     YSKDYTEGWVEFRDKRIAKRVAASLHNTPMGARKRSPFRYDLWNLKYLHRFTWSHLSE
                     HLAFERQVRRQRLRAEVAQAKRETDFYLRNVEQGQRFLAADGDATRPNSSWTFTQRPT
                     EQELRAQKGARPGGRERARLATVQDQARSNRGLLARIFGASLLAESRKEP"
     exon            296..495
                     /gene="Abt1"
                     /inference="alignment:Splign:2.1.0"
     exon            496..1292
                     /gene="Abt1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcgtcatcag gtggcgacag atttgcggct gtcgtgcttc ctatatctgc catggtgaaa
       61 gtaggaaagc tggtggagga gcaaaaggcg gcgatggagg aagagaaaga ggtgaatgca
      121 gaggcggcgg aggagctgga ggaggccgag gaagcgtcct gcaacggcag caagaagaag
      181 gtagttccgg gtattgtgta cttgggccac gtcccgccgc gattccggcc cctgcacgtt
      241 cgcaacctgc tcagcgtcta cggtgaggtg ggacgcgttt tcttccaggc cgaggacccc
      301 tttgtgagac gaaaaaagaa ggcagccgcg gctgcaggag gaaagaaggg agctaaatac
      361 agcaaggact ataccgaagg ctgggtggag ttccgagaca aacgcatagc caagcgagtg
      421 gcagctagtc tacataacac acccatgggt gcccgcaagc gcagtccctt ccgttatgac
      481 ctgtggaacc tcaagtattt gcatcgtttt acttggtccc acctcagtga acaccttgcc
      541 tttgagcgcc aggtacgaag gcaacgcctg agagcagagg ttgcccaagc gaaacgagag
      601 actgacttct atcttcgaaa cgtagaacag ggacaacgct ttcttgcagc tgatggggat
      661 gctactcgac caaatagctc ctggacattt actcaacgtc ccactgagca ggagctgagg
      721 gcccagaaag gagcacggcc aggagggcgg gaacgagctc ggctggccac agtccaggac
      781 caggcccgat ccaacagagg gctacttgcc aggatctttg gggcctctct acttgcagag
      841 agcaggaaag aaccgtagcc tataagggac tactagtgga agaagaaatg cctgccagcc
      901 ctgcctcctt ctcatctgcc tcctgcagag tgtaaccatc taggcagatg tttgctctgt
      961 tccacagacc aagagtctgg taaaaggcct tttttgttgg tgtcttttac ccactttgac
     1021 caaatctttt aagtgccagt ctgagaactt tactcatact atccaggatg aagaccactg
     1081 taggtgcctg ctgtgtttgt catctgattg cctgcctctt tctcagtggg cacctaacag
     1141 tttctggctg gaaagagtag acttgccttc cactagggta gtggtctgtg gtctttgttc
     1201 actgtagtgg agggctgaat taacaggaat tggatttgtg gtccaatttg tggtttatgt
     1261 ttaaaaataa aaaataattt atatgctttt taaaaaaaaa aaaaaaaaaa aaaaaaaaa
//
