LOCUS       NM_001160263            1580 bp    mRNA    linear   ROD 27-MAR-2024
DEFINITION  Rattus norvegicus ABO, alpha 1-3-N-acetylgalactosaminyltransferase
            and alpha 1-3-galactosyltransferase (Abo), mRNA.
ACCESSION   NM_001160263
VERSION     NM_001160263.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 1580)
  AUTHORS   Li,J., Wang,X., Chen,J., Cai,Y., Deng,A. and Yang,M.
  TITLE     Association between ABO blood groups and risk of SARS-CoV-2
            pneumonia
  JOURNAL   Br J Haematol 190 (1), 24-27 (2020)
   PUBMED   32379894
REFERENCE   2  (bases 1 to 1580)
  AUTHORS   Kuo,K.C., Kuo,H.C., Huang,L.T., Lin,C.S. and Yang,S.N.
  TITLE     The clinical implications of ABO blood groups in Pseudomonas
            aeruginosa sepsis in children
  JOURNAL   J Microbiol Immunol Infect 46 (2), 109-114 (2013)
   PUBMED   22464692
REFERENCE   3  (bases 1 to 1580)
  AUTHORS   Ju,W.Q., Zhou,J., He,X.S., Wang,D.P., Wu,L.W., Guo,Z.Y., Zhu,X.F.
            and Huang,J.F.
  TITLE     [Clinical efficacies of ABO-incompatible adult liver
            transplantation]
  JOURNAL   Zhonghua Yi Xue Za Zhi 91 (36), 2558-2560 (2011)
   PUBMED   22321886
REFERENCE   4  (bases 1 to 1580)
  AUTHORS   Wolpin,B.M., Kraft,P., Gross,M., Helzlsouer,K.,
            Bueno-de-Mesquita,H.B., Steplowski,E., Stolzenberg-Solomon,R.Z.,
            Arslan,A.A., Jacobs,E.J., Lacroix,A., Petersen,G., Zheng,W.,
            Albanes,D., Allen,N.E., Amundadottir,L., Anderson,G.,
            Boutron-Ruault,M.C., Buring,J.E., Canzian,F., Chanock,S.J.,
            Clipp,S., Gaziano,J.M., Giovannucci,E.L., Hallmans,G.,
            Hankinson,S.E., Hoover,R.N., Hunter,D.J., Hutchinson,A., Jacobs,K.,
            Kooperberg,C., Lynch,S.M., Mendelsohn,J.B., Michaud,D.S.,
            Overvad,K., Patel,A.V., Rajkovic,A., Sanchez,M.J., Shu,X.O.,
            Slimani,N., Thomas,G., Tobias,G.S., Trichopoulos,D., Vineis,P.,
            Virtamo,J., Wactawski-Wende,J., Yu,K., Zeleniuch-Jacquotte,A.,
            Hartge,P. and Fuchs,C.S.
  TITLE     Pancreatic cancer risk and ABO blood group alleles: results from
            the pancreatic cancer cohort consortium
  JOURNAL   Cancer Res 70 (3), 1015-1023 (2010)
   PUBMED   20103627
REFERENCE   5  (bases 1 to 1580)
  AUTHORS   Bijanzadeh,M., Ramachandra,N.B., Mahesh,P.A., Savitha,M.R.,
            Manjunath,B.S. and Jayaraj,B.S.
  TITLE     Lack of association between asthma and ABO blood group
  JOURNAL   Lung 187 (6), 389-392 (2009)
   PUBMED   19771478
REFERENCE   6  (bases 1 to 1580)
  AUTHORS   Chobanov,R.E. and Salekhov,A.A.
  TITLE     [The distribution of ABO system blood groups in patients with
            unilocular echinococcosis]
  JOURNAL   Med Parazitol (Mosk) (2), 18-20 (1990)
   PUBMED   2142987
REFERENCE   7  (bases 1 to 1580)
  AUTHORS   Hunt,B.J., Yacoub,M., Amin,S., Devenish,A. and Contreras,M.
  TITLE     Induction of red blood cell destruction by graft-derived antibodies
            after minor ABO-mismatched heart and lung transplantation
  JOURNAL   Transplantation 46 (2), 246-249 (1988)
   PUBMED   3136561
REFERENCE   8  (bases 1 to 1580)
  AUTHORS   Bacigalupo,A., Van Lint,M.T., Occhini,D., Margiocco,M., Ferrari,G.,
            Pittaluga,P.A., Frassoni,F., Peralvo,J., Lercari,G., Carubia,F. et
            al.
  TITLE     ABO compatibility and acute graft-versus-host disease following
            allogeneic bone marrow transplantation
  JOURNAL   Transplantation 45 (6), 1091-1094 (1988)
   PUBMED   3289150
REFERENCE   9  (bases 1 to 1580)
  AUTHORS   Fedorova,G.I., Slepushkin,A.N., Popova,N.S., Mel'nichenko,E.I. and
            Markina,I.A.
  TITLE     [Correlations of the antigenic specificity of human blood with the
            levels of antihemagglutinins to influenza viruses]
  JOURNAL   Vopr Virusol 28 (1), 54-57 (1983)
   PUBMED   6189297
REFERENCE   10 (bases 1 to 1580)
  AUTHORS   Bubnov,Y.I., Turkova,T.I. and Eremyan,A.V.
  TITLE     Influence of infectious diseases on hereditary polymorphism with
            respect to the blood groups of the ABO system
  JOURNAL   Sov Genet 9 (1), 105-108 (1974)
   PUBMED   4375858
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000003.1.
            
            On Mar 16, 2021 this sequence version replaced NM_001160263.1.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AB081652.1, AY228143.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA5760383, SAMEA5760389
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-108               JAXUCZ010000003.1  30580769-30580876   c
            109-178             JAXUCZ010000003.1  30566435-30566504   c
            179-235             JAXUCZ010000003.1  30565762-30565818   c
            236-271             JAXUCZ010000003.1  30563970-30564005   c
            272-406             JAXUCZ010000003.1  30563351-30563485   c
            407-1580            JAXUCZ010000003.1  30560174-30561347   c
FEATURES             Location/Qualifiers
     source          1..1580
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="3"
                     /map="3p13"
     gene            1..1580
                     /gene="Abo"
                     /gene_synonym="Abo2"
                     /note="ABO, alpha 1-3-N-acetylgalactosaminyltransferase
                     and alpha 1-3-galactosyltransferase"
                     /db_xref="GeneID:100301568"
                     /db_xref="RGD:2307241"
     exon            1..108
                     /gene="Abo"
                     /gene_synonym="Abo2"
                     /inference="alignment:Splign:2.1.0"
     CDS             90..1094
                     /gene="Abo"
                     /gene_synonym="Abo2"
                     /EC_number="2.4.1.37"
                     /EC_number="2.4.1.40"
                     /note="NAGAT 2; a transferase; b transferase; cis-AB
                     transferase 2; histo-blood group A transferase;
                     histo-blood group B transferase; b blood group
                     galactosyltransferase; blood group A glycosyltransferase
                     2; putative blood group A transferase T2;
                     fucosylglycoprotein 3-alpha-galactosyltransferase;
                     fucosylglycoprotein
                     alpha-N-acetylgalactosaminyltransferase;
                     glycoprotein-fucosylgalactoside
                     alpha-galactosyltransferase; ABO blood group (transferase
                     A, alpha 1-3-N-acetylgalactosaminyltransferase;
                     transferase B, alpha 1-3-galactosyltransferase);
                     glycoprotein-fucosylgalactoside
                     alpha-N-acetylgalactosaminyltransferase; ABO blood group
                     (alpha 1-3-N-acetylgalactosaminyltransferase, alpha
                     1-3-galactosyltransferase)"
                     /codon_start=1
                     /product="histo-blood group ABO system transferase 2"
                     /protein_id="NP_001153735.1"
                     /db_xref="GeneID:100301568"
                     /db_xref="RGD:2307241"
                     /translation="MKDLRFGRLKCYSLHLGILPLTVLVLVFFCFVCLSLRSQEWGHP
                     GAVNRKAYPQPRVLTPTRTDVLVLTPWLAPIIWEGTFDIDTLNEQFRLRNTTIGLTVF
                     AVKKYVVFLKLFLETAEQHFMVGHKVIYYVFTDRPADVPQVPLGAGRRLVVLTVRNYT
                     RWQDVSMHRMEVISHFSEQRFRHEVDYLVCADVDMKFRDHVGVEILSALFGTLHPGFY
                     RSRRESFTYERRPQSQAYIPWDQGDFYYMGAFFGGSVVEVHHLTKACHQAMVEDQANG
                     IEAVWHDESHLNKYLLYHKPTKVLSPEYMWDQQLLGWPSIMKKLRYVAVPKNHQAIRN
                     "
     exon            109..178
                     /gene="Abo"
                     /gene_synonym="Abo2"
                     /inference="alignment:Splign:2.1.0"
     exon            179..235
                     /gene="Abo"
                     /gene_synonym="Abo2"
                     /inference="alignment:Splign:2.1.0"
     exon            236..271
                     /gene="Abo"
                     /gene_synonym="Abo2"
                     /inference="alignment:Splign:2.1.0"
     exon            272..406
                     /gene="Abo"
                     /gene_synonym="Abo2"
                     /inference="alignment:Splign:2.1.0"
     exon            407..1580
                     /gene="Abo"
                     /gene_synonym="Abo2"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctccgggtgc cggagggtct gtgttcctgg gtgctactcc tccctgcctg tatccttcgg
       61 gcgttgaact cgggtgctgc agcagagcaa tgaaggatct gcggttcgga agactgaaat
      121 gctactccct tcatcttgga atccttcccc tcacggtgct cgtcttagtc ttcttttgct
      181 tcgtgtgcct gagcctcaga agccaggaat gggggcaccc aggagctgtg aataggaagg
      241 cctatcccca gccaagggta ctgacaccca ctaggacaga tgttcttgtc ctgactcctt
      301 ggctggctcc catcatctgg gaggggacct tcgacattga cacactgaat gagcagttca
      361 ggcttcggaa caccacgatc ggactgactg tgtttgccgt caaaaagtat gtggtgttcc
      421 tgaagctctt cctggagacg gcagagcagc acttcatggt gggacacaag gtcatctact
      481 atgtcttcac tgaccggcca gctgatgtcc cacaggtgcc cctgggtgca ggacggcggc
      541 tggtggtgct aactgtgcgc aactacaccc gctggcagga cgtgtccatg cacaggatgg
      601 aggtgatcag ccacttctca gagcagcgct ttcggcatga ggtggactac ctggtgtgtg
      661 cagatgtgga catgaagttc agggaccacg tgggtgtgga gattctctca gcgctctttg
      721 gcaccctgca tcctggcttc taccgtagcc gacgagagtc ctttacctat gagcgccggc
      781 cacagtccca ggcctacatc ccctgggacc agggtgactt ttactatatg ggagccttct
      841 ttggggggtc agtggtggag gtgcaccatc tcaccaaggc ctgccaccag gctatggtgg
      901 aggaccaggc caatggcatt gaggccgtgt ggcatgacga gagccatctg aacaagtacc
      961 tgctatacca taagccgaca aaggtgctgt ccccagagta catgtgggac cagcagctac
     1021 tgggctggcc ctccatcatg aagaagctga gatatgtggc cgtgcccaag aaccatcagg
     1081 cgatcaggaa ctgatagctg aatccctgtt ggagaggaca ggccatagcc aggggcactc
     1141 cagcctgtgc tggaactgaa aagatttgag ggacaattgt caccctctat cccacctcag
     1201 agtccagcag gcccagtgtc acttggctta ccacacactt gagtcctgga gtggcaacca
     1261 tcttcagctc cactatgtgt ccctgagctc cttgcattga gtggcatggt atatggaatc
     1321 ttcagaacat ggagagagtc tgttacatag ttaactgagg gttggtgcat cctccctcag
     1381 gcttggtcct tcctcttcag ggaggcttga cagagggccc gtgcccatag gaacaggcag
     1441 gagggcaggg agagtcagcc tgcagtccac agaggtgctt atctaccgtt cagctcattc
     1501 ggggcagatc accgatcatt tttggtttat ttgggaatag gtatctatcc attcctggga
     1561 ataaatgcat ttctaggtga
//
