LOCUS       NM_001100736            2175 bp    mRNA    linear   ROD 03-APR-2024
DEFINITION  Rattus norvegicus abhydrolase domain containing 17C, depalmitoylase
            (Abhd17c), mRNA.
ACCESSION   NM_001100736 XM_001068403 XM_341879
VERSION     NM_001100736.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2175)
  AUTHORS   Tortosa,E., Adolfs,Y., Fukata,M., Pasterkamp,R.J., Kapitein,L.C.
            and Hoogenraad,C.C.
  TITLE     Dynamic Palmitoylation Targets MAP6 to the Axon to Promote
            Microtubule Stabilization during Neuronal Polarization
  JOURNAL   Neuron 94 (4), 809-825 (2017)
   PUBMED   28521134
REFERENCE   2  (bases 1 to 2175)
  AUTHORS   Yokoi,N., Fukata,Y., Sekiya,A., Murakami,T., Kobayashi,K. and
            Fukata,M.
  TITLE     Identification of PSD-95 Depalmitoylating Enzymes
  JOURNAL   J Neurosci 36 (24), 6431-6444 (2016)
   PUBMED   27307232
REFERENCE   3  (bases 1 to 2175)
  AUTHORS   Lin,D.T. and Conibear,E.
  TITLE     ABHD17 proteins are novel protein depalmitoylases that regulate
            N-Ras palmitate turnover and subcellular localization
  JOURNAL   Elife 4, e11306 (2015)
   PUBMED   26701913
  REMARK    Publication Status: Online-Only
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from
            JAXUCZ010000001.1.
            
            On Nov 27, 2020 this sequence version replaced NM_001100736.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC169098.1, SRR26643295.3002.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN16676786 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-578               JAXUCZ010000001.1  147534138-147534715 c
            579-758             JAXUCZ010000001.1  147498627-147498806 c
            759-2175            JAXUCZ010000001.1  147493755-147495171 c
FEATURES             Location/Qualifiers
     source          1..2175
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="1"
                     /map="1q31"
     gene            1..2175
                     /gene="Abhd17c"
                     /gene_synonym="Fam108c1; RGD1308210"
                     /note="abhydrolase domain containing 17C, depalmitoylase"
                     /db_xref="GeneID:361601"
                     /db_xref="RGD:1308210"
     exon            1..578
                     /gene="Abhd17c"
                     /gene_synonym="Fam108c1; RGD1308210"
                     /inference="alignment:Splign:2.1.0"
     CDS             16..978
                     /gene="Abhd17c"
                     /gene_synonym="Fam108c1; RGD1308210"
                     /EC_number="3.1.2.22"
                     /note="abhydrolase domain-containing protein FAM108C1;
                     family with sequence similarity 108, member C1;
                     abhydrolase domain-containing protein 17C; protein
                     ABHD17C"
                     /codon_start=1
                     /product="alpha/beta hydrolase domain-containing protein
                     17C"
                     /protein_id="NP_001094206.1"
                     /db_xref="GeneID:361601"
                     /db_xref="RGD:1308210"
                     /translation="MPEPGPRMNGFSLGELCWLFCCPPCPSRIAAKLAFLPPEPTYTV
                     LAPEQRAPAPAATPAPAPAAQPAPAEEGAGPGACSLHLSERADWQYSQRELDAVEVFF
                     SRTARDNRLGCMFVRCAPSSRYTLLFSHGNAVDLGQMCSFYIGLGSRINCNIFSYDYS
                     GYGVSSGKPSEKNLYADIDAAWQALRTRYGVSPENIILYGQSIGTVPTVDLASRYECA
                     AVILHSPLMSGLRVAFPDTRKTYCFDAFPSIDKISKVTSPVLVIHGTEDEVIDFSHGL
                     AMYERCPRAVEPLWVEGAGHNDIELYAQYLERLKQFISHELPNS"
     exon            579..758
                     /gene="Abhd17c"
                     /gene_synonym="Fam108c1; RGD1308210"
                     /inference="alignment:Splign:2.1.0"
     exon            759..2175
                     /gene="Abhd17c"
                     /gene_synonym="Fam108c1; RGD1308210"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 cgccaggccg tcccgatgcc cgagcccggc cccaggatga acggcttctc gctcggcgag
       61 ctgtgctggc tcttctgctg ccctccttgt ccgagccgca tcgccgccaa gctggccttc
      121 ctgccgcccg aacccaccta cacggtgctg gcgcccgagc agcgcgcgcc cgcgcccgct
      181 gcgaccccgg cgccagcccc ggcggcgcag cccgctccgg ccgaggaggg tgcgggcccc
      241 ggcgcgtgca gcctgcacct gagcgagcgc gccgactggc agtactcgca gcgcgaactg
      301 gacgccgtag aggtcttctt ctcgcgcacg gcccgcgaca accggctggg ctgcatgttc
      361 gtgcgctgcg cgccctccag ccgctacacg ctgctcttct ctcacggcaa cgctgtggac
      421 ttgggccaga tgtgtagctt ctacatcggc ctgggctcgc gcatcaactg caacatcttt
      481 tcttacgact attcgggcta tggtgtgagc tccggcaagc cctccgaaaa gaatctctac
      541 gccgacatcg acgccgcgtg gcaggcgttg cgcacccggt atggtgtgag tcctgagaac
      601 attatcctct acggacagag cattggcact gtccccactg tggacctggc ctcgcggtat
      661 gagtgtgcag ccgtcatcct ccattcccct ctgatgtctg gattgcgtgt tgcttttcca
      721 gataccagga aaacttactg ctttgatgct ttccccagca ttgacaagat atctaaagtc
      781 acctctcctg tgttggtcat tcacggtacc gaggatgagg tcatcgattt ctcgcatggc
      841 ttggcgatgt atgagcgctg tccccgtgct gtagagcccc tgtgggttga gggggctggg
      901 cacaatgata tagagctcta tgcacagtac ctagaacgac taaaacagtt catatctcac
      961 gagcttccca actcctgaag acggcggcca accttacctc attactgtga agcgaggatc
     1021 cttgtttgca cacgctttga ctggatttaa cagtgatacc taataaccac agagaagggc
     1081 ccagcctttg ggtgttctcc ttaaagagct aacacagtct gtcttttgta cctaatctcc
     1141 accttccatt aggctgagca gctggattct cagctgcaag accttgcagg agtgggaacg
     1201 agagttgacc atgagggctg tttcccaggg ctgtagacta aagtgtgatc aagtctgtct
     1261 ccttcgctgt cacctctgat tccccccacc caccggtgca ggatcaccgt ctcacccatg
     1321 tgccggtgtt tgacctgagg cgctttcagc cctggtgcca agggtgcgat tcctttgtga
     1381 agctgtggta gtgtaactgg aaaactgtga gaaatcctcc attaactcgt gttaacacac
     1441 aagtctttcc cacacatgaa gaatgatttc ctggaactat cactaacagc ttcatcaact
     1501 gttaccattt aaatacaact ggaatattct taaacaacag gaaactgggg ttttttaagt
     1561 gtaaatttat tactagccaa gagttttaat attttgattg tctggtctaa tagagcctgg
     1621 ccaactgtcc ctctgtaaag tcctccttgt cggctttctt aaagccctgt acatatttgc
     1681 aattacattg tgcacaaatt cttaatggat acatttcttt tgtcaggcta caacaacaga
     1741 ctgcagattc cttgtttgta ttgtaaatga ttgaatacat tttgttaata tgtttttatt
     1801 cctatgtttt gctattaaaa tttttataac atttccaaga caaaaaattc caagtttctg
     1861 ctttgaagaa tttaggtaat taaattaccc taagctgatc tcttagttta ggagttcttt
     1921 gggttttgac actggagttg tgccaggtga acatcagaaa cgagatgttt aaatcactac
     1981 actacttgta ttggttgcgg gattgggttt ggggttgttt ggtcttattt tagttttctt
     2041 ttttcaaatt taaaagcctt aaatgtactg taagcctcag atcgttgtac aactggattg
     2101 cgttggttgc cagtttgtgt gctgttgcct ggatgcggca cggtgggtgg taatggaata
     2161 aaggacgcat ggatc
//
