LOCUS       NM_001271072            5283 bp    mRNA    linear   ROD 30-MAR-2024
DEFINITION  Rattus norvegicus abhydrolase domain containing 13 (Abhd13), mRNA.
ACCESSION   NM_001271072
VERSION     NM_001271072.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 5283)
  AUTHORS   Yokoi,N., Fukata,Y., Sekiya,A., Murakami,T., Kobayashi,K. and
            Fukata,M.
  TITLE     Identification of PSD-95 Depalmitoylating Enzymes
  JOURNAL   J Neurosci 36 (24), 6431-6444 (2016)
   PUBMED   27307232
REFERENCE   2  (bases 1 to 5283)
  AUTHORS   Ghosh,D., Lippert,D., Krokhin,O., Cortens,J.P. and Wilkins,J.A.
  TITLE     Defining the membrane proteome of NK cells
  JOURNAL   J Mass Spectrom 45 (1), 1-25 (2010)
   PUBMED   19946888
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            JAXUCZ010000016.1.
            
            Sequence Note: This RefSeq record was created from genomic sequence
            data to make the sequence consistent with the reference genome
            assembly. The genomic coordinates used for the transcript record
            were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: FQ212188.1, FQ221944.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN12840132 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-284               JAXUCZ010000016.1  86218401-86218684   c
            285-5283            JAXUCZ010000016.1  86203851-86208849   c
FEATURES             Location/Qualifiers
     source          1..5283
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN"
                     /db_xref="taxon:10116"
                     /chromosome="16"
                     /map="16q12.5"
     gene            1..5283
                     /gene="Abhd13"
                     /gene_synonym="RGD1308317"
                     /note="abhydrolase domain containing 13"
                     /db_xref="GeneID:306630"
                     /db_xref="RGD:1308317"
     exon            1..284
                     /gene="Abhd13"
                     /gene_synonym="RGD1308317"
                     /inference="alignment:Splign:2.1.0"
     exon            285..5283
                     /gene="Abhd13"
                     /gene_synonym="RGD1308317"
                     /inference="alignment:Splign:2.1.0"
     CDS             305..1318
                     /gene="Abhd13"
                     /gene_synonym="RGD1308317"
                     /note="abhydrolase domain-containing protein 13;
                     alpha/beta hydrolase domain-containing protein 13"
                     /codon_start=1
                     /product="protein ABHD13"
                     /protein_id="NP_001258001.1"
                     /db_xref="GeneID:306630"
                     /db_xref="RGD:1308317"
                     /translation="MEKPWMLWSFIERWLLALVSWSWALCRISLLPLIVTFHLYGGIV
                     LLLLIFVSIAGILYKFQDVLLYFPEQPSSSRLYVPMPTGIPHENIFIRTKDGVRLNLI
                     LVRYTGDNSPYCPTIIYFHGNAGNIGHRLPNALLMLVNLKVNLVLVDYRGYGKSEGEA
                     SEEGLYLDSEAVLDYVMTRPDLDKTKVFLFGRSLGGAVAIHLASENSHRISAIMVENT
                     FLSIPHMASTLFSFFPMRYLPLWCYKNKFLSYRKISQCRMPSLFISGLSDQLIPPVMM
                     KQLYELSPSRTKRLAIFPDGTHNDTWQCQGYFTALEQFIKEVIKSHSPEDMTKTSSNV
                     TII"
ORIGIN      
        1 gcatgcccag aggggtgaac aggttggctt cgcgctccgg gaaggaagcc ggagaacagg
       61 ttatgtgggg gctggcggtg gcatttgcca gggacaccgc acgcgagccg gaagtgcagg
      121 ctgcgccagc cgcggcgcaa gagctccggg ctagacggtg gcgacggcga cccctcggcg
      181 ggaggaggac gatgaggagc ggcgggggcg gcgcggggcc tcgctgctgc gcggagccgg
      241 gttccgagcc cgcggccgac tgcgcatccc gcccgcgagc ctgagacacc tacgtggagc
      301 tgccatggaa aaaccctgga tgctgtggag cttcatcgaa agatggctgc tggccctggt
      361 gtcctggtct tgggctctct gccgcatctc tctcttacct ttgatagtga cttttcatct
      421 gtatggaggc attgtcttac tgttgttaat attcgtgtcg attgcaggca tcttgtataa
      481 attccaggat gtcttgctct actttccaga acagccatcg tcttcccgcc tttatgttcc
      541 catgcctacg ggtattcccc atgaaaatat tttcatcaga accaaagatg gcgtgcgcct
      601 gaatctgatc ttggtgagat acactggaga caattccccc tattgcccga caataattta
      661 ttttcatgga aatgcaggca acataggcca caggttacca aacgcactgc ttatgctggt
      721 gaacctcaaa gtgaacctcg ttcttgttga ttaccggggg tatggaaaaa gtgaagggga
      781 agccagtgaa gaaggactgt atttggattc tgaagctgtg ctagactatg tgatgacgag
      841 acctgatctc gataaaacca aggttttcct tttcggccgc tccctgggag gagcagtggc
      901 cattcacttg gcttctgaga attctcacag aatttcagcc atcatggtgg agaacacgtt
      961 cctcagcata ccacacatgg ccagcactct gttttcattc ttcccaatgc gttaccttcc
     1021 tttatggtgc tataaaaata agtttctgtc ctacagaaag atctcccagt gcaggatgcc
     1081 ttctctcttc atctctggcc tctctgacca gttgattcca cctgtgatga tgaaacagct
     1141 ctacgagctc tccccatccc ggactaagag attagccatt ttcccagatg ggacgcacaa
     1201 cgacacgtgg cagtgccaag gctacttcac tgcactagaa cagtttatca aggaagtgat
     1261 caagagtcat tctcccgaag acatgacaaa aacatcatcc aatgtcacca tcatctgatg
     1321 ccaccctctt gatggagggt gatggtgtct tttctgggtg tgtgtccata ccggtctgca
     1381 cagtgactct gagctttgaa aggcctcagc attccattct gacgatgctg taactttcca
     1441 cattttcaaa ctgggcttct tagagtgttt gatatcccca tcagagctcc agcctggtga
     1501 actaccctta actttgttta acataccggt ttgatagatg ccatccagag gtttcttgtt
     1561 ggcgaagtgg taagatctag gttgtactca gatggagatg cgcacaagaa accttcaggt
     1621 gtctgtcagt cctttagtga tagtgggaca atcacgggaa gcaagcaagt gctgctgcgt
     1681 tttcacctta aacgttagga tgaagtgcat ggcggtgttt attcctcact tatgcaacgc
     1741 gatattttca tgtaaatagc actggtcaca tgccaatgta catggtttcc tgggttatat
     1801 ctatttttat gtaaactcta ttttgttttg gtgaggaatg agtgtgaggc ctgtgagcag
     1861 attccatgtt ctgctgctac tgagatccgg cttttcctaa taataaacag gacctttttc
     1921 caatatagat gtgctgtgtt tttgttagga gctgtctgga gcgtgcctag tgggatagga
     1981 agttagcatt gtactgcagc tttctttgta tactgaacat tttaaacatt tgtgactttg
     2041 gttgcaaaca gaattttagc ctctgtcagt ttgaatcttc agataaacaa taacagccac
     2101 agcaagggct agaactagcc gatagttgag tgagggtaac tcaagacatg tgagcacaca
     2161 gccttatgca acgctttcat ctgaatgaag tcccagtacc tggatgtgcc tgacctgaca
     2221 gaggcaagca tcatttattg aactttttgc aactttttca agatgaaaga aaaacaaaaa
     2281 agcaaataac caagtatggc ttaatattcc agttctgggt aatggactgt ataaagggac
     2341 agtcttagga aaatttgtca gtctttactg gtgggattga aggattccaa agcttctctc
     2401 tgcctcttat acaggtagca attaaggagc tgtaggtggg aagttgtact tgtcaacatg
     2461 agccctttga agcctggaaa catttggtaa cattccagtc aggaggtgga acctgccaag
     2521 tcctttccca cagtcctcac caggtagatg gcttgagccc ttgcacatta ggtcagctcc
     2581 aacccatgat tgcagatagc ttagctgtgt tttttgacct tccacaagca gctagagcac
     2641 agtaatagtc ttgaccttta tttaaaactt tccatgaaca tagggctaga agtacttttg
     2701 ccaagtagca ttcttagcct tcattttatg ccaatgttta gaaaacaata atgtatagca
     2761 agtataattt ctaaagaata atgcttttct ataaattatt aattgtaaag agtcttgttt
     2821 tttaaagagt tggtaactcg tcatggaggg tgtattttgt atgtgtaaat tcaccacaat
     2881 taaaggctgc ttttcacctt gtcaatcatt gctgtagaat gacgatcctg agtaccagcc
     2941 tgctgaaagg gcaacacgta gcaacagcca gagtgtagac ctgagctgtc atggcatact
     3001 tagttagttt ttacatttac agggtactgt attggagttc tgttttcatt catttaccaa
     3061 tgtgtttttt ggatcatcca ctgaaatagg acagctgctc cttccttgat gttttctctg
     3121 ctgctttctg ttcagctttt gctgatcggg acctgagggg tagaagaacg gcactcaagt
     3181 gtacctacca ccttgcccta cgagagcgaa cacttcacct cagcagagac aactatgttt
     3241 agggatgtag aacatctctc attaccagct atgtatttga tatgagtact ttagatgaat
     3301 aggcatagaa aacaaactca tactgtcagg ggccatgatg cacccctgca tcatttctga
     3361 aaactcatgt ggtctcagtg gaacatgact actgcaggcg tcaccccttc acttcagact
     3421 catcgttggt ggggatgccg tggtctgtca actcctggct cattgagaga tggataaatg
     3481 atcttaagtt atgcagctac tatgaatttg gaaatacaaa aatcatccta aacaggacaa
     3541 gataaactta ggggaaaaaa atcttaaact ccatatttta aagaatgata gagagtgaga
     3601 gaagaactta gttaaaaaac aatcttaaat tctgtatttt aaagaataat agagaacaag
     3661 acttaggtga cccttgtgcc tcatgtaagt gtcttaaaag ttttgattgt ggtgacacat
     3721 ccattaaatg ttactataaa atgggttact caacagctta tgttggcctg agacacttat
     3781 ggatgagctg agacacttag tgttgagaca gatcatggtt ctggtgacat cactggagtg
     3841 tccctgaagt ttacacctac tgatgcttgc ccttctgtca ggcttggctt gggtgggagt
     3901 tgacctggta gacatgtttc acattggatg catatcagtc agcctgcaca tcagatattt
     3961 acattatgat tcataacagc aaaattatat ttaggaagta gcaacaaata attttatggt
     4021 tggagggtca caacagacaa catgaggaaa ctgcattaaa gggtcacagg cttggcaagg
     4081 ttgagaacca ttgatctagg ctgtcattga catatttgag ccctctgatt atccctcaag
     4141 cctttatcct atcctatcat gtttgacaat tatatatttt aaagagaact gcaaagaaaa
     4201 attagtcata agtaactctt ttggaatgtc tacttaggta ttgtcatgtg actcaggtaa
     4261 agttagaatt gatacagaac aggggtctat tttctagctt gctagagtag aaaatgcaaa
     4321 actgtattct cattgcatat gcacctccct tcccctcatc ggaagcactg ctgccttgtc
     4381 tgacagcagg taggcgatca tcctattcta gtcaacattt gccaatgaca cagatatacc
     4441 tccatttata ttttgtattt taaaaaagta gacaaaagat agaactgtat aacccacact
     4501 ttttgacaaa aagtgcaata taaacattta acagatgtgt gtgcaacatc atttatgtca
     4561 atttctgtca atacaagatg tactaaaatt catcttccat ataggagcat tcagtatgaa
     4621 gtaagttagt tcagtttcat aatctgagcc ataattttgt tgttgccata ttttctttga
     4681 aatagtaata aaattttata gctcaaattc taatgtcctc ttaactatgt gcttaccctg
     4741 gcaaggaaac atttgtgggg ttttgtggtt ggtttttggt tcatttttct ttctttcttt
     4801 tttttttttt tttacatttc tcttaaggta tactatctat ttttctgtac tgacatgcaa
     4861 taaattgata catgaacagc ttgattaatg tcagatagtt tgtattcagt ctttttaaga
     4921 attctattca tgtaaagtct atcttaggac gttaagttat ctaacggttc aataaaacca
     4981 cgagtttcac tgaaagtaat gaatcttatt ctaatcgtgt ggatgaaaat gtttgcattt
     5041 ccttttccca agaatatagc agtcctttgt gcatttaggc tgataatcaa aaacatttct
     5101 acatatgaac tgctgctgag ttcctaagcc ccaaacatct tttcagtcat atggttgttg
     5161 ttggactgtc tccttgtctt cagacttcat aaaatactct aagaaatttt gatggttgtt
     5221 ttcctcccat ttgtgtttta gttgatgatt ccagatgatt aaaatagtct tacagttcac
     5281 cat
//
