LOCUS       NM_001004076            2049 bp    mRNA    linear   ROD 03-MAR-2024
DEFINITION  Rattus norvegicus ATP-binding cassette, subfamily G (WHITE), member
            3-like 1 (Abcg3l1), mRNA.
ACCESSION   NM_001004076 XM_213998
VERSION     NM_001004076.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
REFERENCE   1  (bases 1 to 2049)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     PROVISIONAL REFSEQ: This record has not yet been subject to final
            NCBI review. The reference sequence was derived from BC098896.1.
            
            On Jul 13, 2005 this sequence version replaced NM_001004076.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC098896.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMD00132261,
                                           SAMD00132262 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..2049
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /db_xref="taxon:10116"
                     /chromosome="14"
                     /map="14p22"
     gene            1..2049
                     /gene="Abcg3l1"
                     /gene_synonym="Abcg3"
                     /note="ATP-binding cassette, subfamily G (WHITE), member
                     3-like 1"
                     /db_xref="GeneID:289453"
                     /db_xref="RGD:1303294"
     exon            1..54
                     /gene="Abcg3l1"
                     /gene_synonym="Abcg3"
                     /inference="alignment:Splign:2.1.0"
     exon            55..276
                     /gene="Abcg3l1"
                     /gene_synonym="Abcg3"
                     /inference="alignment:Splign:2.1.0"
     CDS             74..2014
                     /gene="Abcg3l1"
                     /gene_synonym="Abcg3"
                     /EC_number="7.6.2.2"
                     /note="ATP-binding cassette, sub-family G (WHITE), member
                     3; ATP-binding cassette, sub-family G (WHITE), member
                     3-like 1"
                     /codon_start=1
                     /product="broad substrate specificity ATP-binding cassette
                     transporter ABCG2"
                     /protein_id="NP_001004076.2"
                     /db_xref="GeneID:289453"
                     /db_xref="RGD:1303294"
                     /translation="MSSSNDPIVIPMIERRQGDLPETNTSDPETLTKEAVLSFHNISY
                     RETVQSGFPLRQQTRVMERLSSISGIMGPGLNAIMGPQDGSRSLLLDVLAARRDPCGL
                     SGDILINGKPRPANFKCTSGYIPQNDVVLGTVTVRDNLEFSAALRLPMTVTRDEKRRR
                     INEVLELLHLEKEQNVKPRSKGLRKRTSIAMELVTEHPILFLDDPTTGLDLRTTTDVI
                     SILRRMSMKGKTIIFSINQPQYSIFRFFDSLTLVASGKLMFHGPARDALEYFTSAGYQ
                     YESHNNPADFFLDVINGGFPDTEEDGHEADENEEFVERQHQVTGKLANMYAQSPLHSA
                     TRARLDQLLGEQKLDRSSAVETTCVTPFWHQLGWITRRSFKNFLGFPWVTTIQVIIIV
                     ILAVVVGTAFRLLQNVCTELQMRAILILLLTGFQCITSVTAGELFVIDQDRFLHEHTS
                     GYYRVSSYFFGKLLAELIPRRLLPSTIFTLITYFIAGLRTSVRGFFTMTFTIMMLAYS
                     ASSLSLSLGAGENVAAITTLLVTIYFVFMLFFSGLSLDTGFLPVLSWIRYFSIPHYGF
                     RALLHNEFLGQNFCPEYNTEEVSRCQNYVICTGEEFLEIQGFHLSSWGFWENHLALAC
                     TMIILLTITYVQLLLLKKRKHC"
     exon            277..336
                     /gene="Abcg3l1"
                     /gene_synonym="Abcg3"
                     /inference="alignment:Splign:2.1.0"
     exon            337..451
                     /gene="Abcg3l1"
                     /gene_synonym="Abcg3"
                     /inference="alignment:Splign:2.1.0"
     exon            452..604
                     /gene="Abcg3l1"
                     /gene_synonym="Abcg3"
                     /inference="alignment:Splign:2.1.0"
     exon            605..741
                     /gene="Abcg3l1"
                     /gene_synonym="Abcg3"
                     /inference="alignment:Splign:2.1.0"
     exon            742..893
                     /gene="Abcg3l1"
                     /gene_synonym="Abcg3"
                     /inference="alignment:Splign:2.1.0"
     exon            894..986
                     /gene="Abcg3l1"
                     /gene_synonym="Abcg3"
                     /inference="alignment:Splign:2.1.0"
     exon            987..1234
                     /gene="Abcg3l1"
                     /gene_synonym="Abcg3"
                     /inference="alignment:Splign:2.1.0"
     exon            1235..1317
                     /gene="Abcg3l1"
                     /gene_synonym="Abcg3"
                     /inference="alignment:Splign:2.1.0"
     exon            1318..1407
                     /gene="Abcg3l1"
                     /gene_synonym="Abcg3"
                     /inference="alignment:Splign:2.1.0"
     exon            1408..1532
                     /gene="Abcg3l1"
                     /gene_synonym="Abcg3"
                     /inference="alignment:Splign:2.1.0"
     exon            1533..1687
                     /gene="Abcg3l1"
                     /gene_synonym="Abcg3"
                     /inference="alignment:Splign:2.1.0"
     exon            1688..1774
                     /gene="Abcg3l1"
                     /gene_synonym="Abcg3"
                     /inference="alignment:Splign:2.1.0"
     exon            1775..1860
                     /gene="Abcg3l1"
                     /gene_synonym="Abcg3"
                     /inference="alignment:Splign:2.1.0"
     exon            1861..2018
                     /gene="Abcg3l1"
                     /gene_synonym="Abcg3"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctctgggaag aagccaggga ctctgtcgga ggcttcgggt ccttgagccg ctgggaagga
       61 agaacctctc aagatgtctt ccagtaacga ccccattgta atcccaatga tagaaagacg
      121 tcaaggtgac cttcccgaaa caaacaccag tgacccggag acactgacta aagaggctgt
      181 gttgagtttt cacaacatca gctacagaga aacagtgcag agcggatttc cacttcgtca
      241 gcagacacgt gtgatggaaa gactgtcgag catcagtggg atcatgggac ctggcctcaa
      301 tgccattatg ggacctcagg atgggagcag atctctgtta ttagatgtct tagctgcaag
      361 gagagatccg tgtggattat caggagatat tttgataaac ggtaaacctc gacctgctaa
      421 tttcaaatgt acatctggtt atataccaca aaatgatgtg gtgttgggca cagtgaccgt
      481 gagagacaat ttagagttct cagcagctct ccgacttcca atgactgtaa caagagatga
      541 aaaaaggagg aggatcaatg aggtgcttga acttcttcat ctggaaaaag aacaaaatgt
      601 caagcctaga tccaaaggac tcagaaaaag gaccagtata gcaatggagc tggtcactga
      661 gcatcccatt ttgttcttgg atgatcccac cactggctta gacttgagaa ctacgactga
      721 tgtcatctca atcctgagaa ggatgtcgat gaagggaaag acaatcatct tctccatcaa
      781 tcagcctcag tactccatct tcagattctt tgatagcctc accttagtgg cttcaggaaa
      841 actcatgttt catggacctg cacgggacgc tctggagtac ttcacatctg cgggttacca
      901 atacgagtcc cacaacaacc ctgcagactt cttcctggac gtcattaacg gaggtttccc
      961 tgacacagag gaagatggcc atgaagctga cgaaaatgag gagtttgttg agagacagca
     1021 tcaagtcacg ggaaaattgg ccaatatgta tgcccagtcc cccttacaca gtgccacaag
     1081 agccagactg gatcaactct tgggggaaca gaagctggac aggagctcag ctgtggagac
     1141 cacatgtgtc acccctttct ggcatcagct tgggtggatc acccgtcgat ccttcaaaaa
     1201 tttcctgggt tttccatggg tcactacaat tcaggtgatt atcatagtca tactggcggt
     1261 ggtcgtgggg actgctttcc gtctcctgca aaatgtttgt actgaactcc agatgagagc
     1321 tatcctgatc ctcctgctca ctggtttcca gtgcatcaca agtgtgactg caggggagct
     1381 ctttgtgatt gaccaggatc gctttctaca tgagcacacc agtggatact acagagtgtc
     1441 atcctatttc tttgggaaat tgctggctga gctaataccc aggagactgt tgccaagtac
     1501 aatatttact cttataacat acttcatagc aggactaaga acgagtgtgc ggggtttctt
     1561 caccatgaca tttaccatca tgatgctggc ttattctgcc agttccctgt cactgtcttt
     1621 aggagctggg gagaacgtag cagctataac aacactactg gtgaccatct actttgtgtt
     1681 catgctgttt ttttcaggtc tgtcactaga tacaggcttc ctgcctgtac tctcgtggat
     1741 tcggtacttt agcattcctc attatggatt tagggctttg ctacacaacg aattcctggg
     1801 acaaaacttc tgtccagaat acaacacaga agaagtcagt agatgtcaga actatgtaat
     1861 atgtactggt gaagaattct tggagatcca gggcttccat ctctcatcgt ggggcttctg
     1921 ggagaatcac ctggccttag cttgtacaat gattatcctc ttaacaatta cctatgtaca
     1981 attgctactt cttaagaaaa ggaaacattg ctaaattaaa aaaaaaaaaa aaaaaaaaaa
     2041 aaaaaaaaa
//
