LOCUS       XM_039107118            7369 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ATP binding cassette subfamily C
            member 9 (Abcc9), transcript variant X2, mRNA.
ACCESSION   XM_039107118
VERSION     XM_039107118.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7369
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..7369
                     /gene="Abcc9"
                     /gene_synonym="Sur2"
                     /note="ATP binding cassette subfamily C member 9; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 1 mRNA, 42 ESTs, 4 long SRA reads, 4 Proteins, and 99%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 51 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:25560"
                     /db_xref="RGD:3787"
     CDS             374..5011
                     /gene="Abcc9"
                     /gene_synonym="Sur2"
                     /codon_start=1
                     /product="ATP-binding cassette sub-family C member 9
                     isoform X2"
                     /protein_id="XP_038963046.1"
                     /db_xref="GeneID:25560"
                     /db_xref="RGD:3787"
                     /translation="MSLSFCGNNISSYNIYHGVLQNPCFVDALNLVPHVFLLFITFPI
                     LFIGWGSQSSKVQIHHNTWLHFPGHNLRWILTFALLFVHVCEIAEGIVSDSQRASRHL
                     HLFMPAVMGFVATTTSIVYYHNIETSNFPKLLLALFLYWVMAFITKTIKLVKYWQLGW
                     GMSDLRFCITGVMVILNGLLMAVEINVIRVRRYVFFMNPQKVKPPEDLQDLGVRFLQP
                     FVNLLSKATYWWMNTLIISAHRKPIDLKAIGKLPIAMRAVTNYVCLKEAYEEQKKKAA
                     DHPNRTPSIWLAMYRAFGRPILLSSTFRYLADLLGFAGPLCISGIVQRVNEPKNNTTR
                     FSETLSSKEFLENAHVLAVLLFLALILQRTFLQASYYVTIETGINLRGALLAMIYNKI
                     LRLSTSNLSMGEMTLGQINNLVAIETNQLMWFLFLCPNLWAMPVQIIMGVILLYNLLG
                     SSALVGAAVIVLLAPIQYFIATKLAEAQKSTLDYSTERLKKTNEILKGIKLLKLYAWE
                     HIFCKSVEETRMKELSSLKTFALYTSLSIFMNAAIPIAAVLATFVTHAYASGNNLKPA
                     EAFASLSLFHILVTPLFLLSTVVRFAVKAIISVQKLNEFLLSDEIGEDSWRTGEGTLP
                     FESCKKHTGVQSKPINRKQPGRYHLDNYEQARRLRPAETEDVAIKVTNGYFSWGSGLA
                     TLSNIDIRIPTGQLTMIVGQVGCGKSSLLLAILGEMQTLEGKVYWNNVNESEPSFEAT
                     RSRSRYSVAYAAQKPWLLNATVEENITFGSSFNRQRYKAVTDACSLQPDIDLLPFGDQ
                     TEIGERGINLSGGQRQRICVARALYQNTNIVFLDDPFSALDIHLSDHLMQEGILKFLQ
                     DDKRTVVLVTHKLQYLTHADWIIAMKDGSVLREGTLKDIQTKDVELYEHWKTLMNRQD
                     QELEKDMEADQTTLERKTLRRAMYSREAKAQMEDEDEEEEEEEDEDDNMSTVMRLRTK
                     MPWKTCWWYLTSGGFFLLFLMIFSKLLKHSVIVAIDYWLATWTSEYSINDPGKADQTF
                     YVAGFSILCGAGIFLCLVTSLTVEWMGLTAAKNLHHNLLNKIILGPIRFFDTTPLGLI
                     LNRFSADTNIIDQHIPPTLESLTRSTLLCLSAIGMISYATPVFLIALAPLGVAFYFIQ
                     KYFRVASKDLQELDDSTQLPLLCHFSETAEGLTTIRAFRHETRFKQRMLELTDTNNIA
                     YLFLSAANRWLEVRTDYLGACIVLTASIASISGSSNSGLVGLGLLYALTITNYLNWVV
                     RNLADLEVQMGAVKKVNSFLTMESENYEGTMDPSQVPEHWPQEGEIKIHDLCVRYENN
                     LKPVLKHVKAYIKPGQKVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGIDISKLPL
                     HTLRSRLSIILQDPILFSGSIRFNLDPECKCTDDRLWEALEIAQLKNMVKSLPGGLDA
                     TVTEGGENFSVGQRQLFCLARAFVRKSSILIMDEATASIDMATENILQKVVMTAFADR
                     TVVTIAHRVHTILTADLVIVMKRGNILEYDTPESLLAQEDGVFASFVRADM"
ORIGIN      
        1 ggaggaaaac ttgtcatccc atggagtgtg tgagctcctc ggcttgctcc agagagatcc
       61 tcaaccgctt tgaggagtca gtgactgtaa gctgttgatt ttgatttgtt ttttttcctc
      121 agtaaaggca ttctctattt ctaggattgg gggacttgct ggagaggaga gcgtggggat
      181 caggtttcca gtcggactta cacaatcctg ccggctggag tctaaaccta ctggaaacag
      241 ggaaaggagt tctgtgaact tgtttgaaat ttacatcttc agactgtgcg caggcggttg
      301 gaaggtagat caagtgcacc agtaggggga ctaagttcct gagccaaagt caaggctaat
      361 caactaagaa gaaatgagcc tttccttctg tggtaacaac atctcctcct acaacatcta
      421 ccatggtgtt ctccaaaacc cctgctttgt ggacgcactc aacctggtcc ctcacgtctt
      481 cctgctgttt atcacctttc cgatcctgtt cattggatgg gggagccaaa gctcaaaagt
      541 gcaaattcat cacaacacat ggcttcattt tcctggacac aacctgagat ggattctgac
      601 gtttgcactc ctgttcgtgc atgtctgcga gatagcagaa ggcattgttt cagactcgca
      661 acgggcgtcc aggcatctcc accttttcat gccggctgtg atgggatttg tcgccaccac
      721 cacatccatt gtgtattacc acaacattga aacatcaaac ttccctaaat tacttttagc
      781 tttattcctg tactgggtca tggccttcat tacaaagaca ataaagttgg tcaaatactg
      841 gcagttgggg tggggaatgt cagacctgcg cttctgcatc acgggagtga tggtcatctt
      901 gaatggactg ctgatggctg tggagatcaa tgtcatccgg gtccgaagat atgttttctt
      961 catgaatcct cagaaagtga agcctccaga ggacctccag gacctgggcg tgaggttcct
     1021 ccagccgttt gtgaatttgc tgtccaaagc tacttactgg tggatgaaca cgcttatcat
     1081 atcagctcac aggaaaccta ttgatctgaa ggcgatcgga aagttgccga tagcaatgag
     1141 ggcggtgacg aattatgttt gcttgaagga ggcctatgaa gagcagaaga aaaaggctgc
     1201 ggatcatccg aatcggactc cctccatatg gctggccatg tacagggctt ttgggagacc
     1261 gatcctgctg agcagcacgt tccgctactt ggctgacttg ctgggctttg ccggccctct
     1321 ttgtatttcc ggaatcgtcc agcgtgtgaa tgaaccgaag aataacacga cgagattttc
     1381 agagacactc tcatcgaagg agtttctgga aaatgcccat gtgctggctg tcctgctctt
     1441 cctggccctc atcctgcaaa ggacattttt gcaggcttcc tactatgtga ccatagagac
     1501 cggcatcaac ctgcgtgggg ctctgctggc tatgatctac aacaaaatcc ttcgactgtc
     1561 tacttctaac ctatccatgg gcgagatgac cctgggacag atcaacaact tggttgccat
     1621 agaaaccaat cagctcatgt ggttcttgtt cctgtgtccc aatctgtggg ccatgcccgt
     1681 tcagatcata atgggggtga tcctgctcta taatctgctt gggtcaagcg cactggtagg
     1741 cgcggcggtc atcgtgctcc tcgcaccgat tcagtacttc atcgccacga agctggcgga
     1801 ggctcagaag agcactctgg attattccac cgagaggctg aagaagacaa acgagatact
     1861 gaaaggcatc aagctcctta agctgtatgc ctgggagcac attttctgca agagcgtgga
     1921 agagactaga atgaaggagc tctccagcct caaaaccttc gcgctctaca cgtcgctttc
     1981 catcttcatg aacgcagcca ttcccatcgc agccgttctt gcaacatttg tgacccatgc
     2041 ctatgccagt ggcaacaacc tgaaacccgc agaggccttt gcctctctgt ctctcttcca
     2101 catcctcgtc acaccgctct tcctgctgtc cacggtggtc agattcgcag tgaaagccat
     2161 catcagcgtt cagaagctga atgagtttct cttgagcgat gagattggcg aggacagctg
     2221 gaggactggg gaggggacgc tgccttttga gtcctgtaag aagcacaccg gagtgcaatc
     2281 aaaaccgata aacaggaagc agcctggaag gtaccacctg gacaactacg agcaggcgcg
     2341 gcgtcttcgg cctgctgaga ctgaagatgt tgccataaag gtgacgaacg gatacttctc
     2401 atggggcagt ggtttagcca cattatccaa tattgacatt cgaattccaa caggtcagct
     2461 aaccatgatt gtgggtcagg tgggttgtgg caaatcgtct ctcctccttg ccatccttgg
     2521 tgagatgcag accctggaag gaaaagttta ctggaacaat gtaaatgaat ctgagccttc
     2581 ttttgaagca acccgaagca gaagcaggta ctctgtggct tatgctgccc agaagccttg
     2641 gctcctcaat gctacggtcg aggaaaacat cacttttgga agttctttca acagacagag
     2701 gtacaaggct gtcaccgatg cctgctctct gcagccagac attgatttgt taccctttgg
     2761 agaccaaact gaaattggag agaggggtat caacctgagt gggggtcaga ggcagagaat
     2821 ctgcgtggcc cgggcactct accagaacac caatattgtc ttcttggacg atccattctc
     2881 cgctctggac atccacctga gcgaccactt gatgcaggaa gggatcctga agtttctcca
     2941 ggacgacaag aggacggtcg tccttgtgac tcacaaacta cagtacctga cgcacgcgga
     3001 ctggatcata gccatgaagg atgggagtgt gttaagggaa gggactttga aagacatcca
     3061 gaccaaagac gtggagctct atgaacactg gaaaaccctc atgaatcggc aagatcagga
     3121 attagaaaag gacatggaag ccgaccaaac aacgctggag aggaagactc tccgaagagc
     3181 tatgtactca agggaggcca aagcacagat ggaggatgaa gatgaagagg aggaggagga
     3241 ggaagatgag gacgacaaca tgtcaactgt aatgaggctc aggacgaaga tgccctggaa
     3301 gacctgttgg tggtacctca cttcaggagg gtttttcctg ctcttcctca tgatcttctc
     3361 taagcttttg aagcactctg tgatcgtggc catcgactac tggctagcta cgtggacctc
     3421 cgagtacagt ataaacgacc cagggaaagc tgaccagacc ttctatgtgg ctgggttcag
     3481 catcctctgt ggagcgggca ttttcctttg cctcgtcacc tccctcactg tagaatggat
     3541 gggtctcacc gccgccaaga acctccacca caatctcctc aataagataa ttctgggccc
     3601 aataaggttc tttgatacca cgcccctggg actgatcctc aatcggtttt ctgctgatac
     3661 caacatcatc gaccaacata tccctccgac cttggagtcg ctgacccgct ctaccctgct
     3721 ctgcctgtcg gctattggga tgatctccta tgctacaccc gtgtttctca tcgctcttgc
     3781 gcccctgggc gtcgcctttt atttcatcca gaaatacttc cgggttgcct ctaaggatct
     3841 ccaggaactc gatgacagca cccagctccc cctgctttgt cacttctcag aaacagctga
     3901 agggcttacc actatccggg ccttcaggca tgaaaccaga ttcaagcaac gcatgctgga
     3961 gctgacagac acaaacaaca ttgcctactt atttctctcc gcagccaaca gatggctgga
     4021 ggtcaggacg gactacctgg gagcttgcat tgttctgacg gcctccattg catccatcag
     4081 tggctcttcc aactctggac tagtgggctt gggccttctg tatgccctca cgataaccaa
     4141 ttacctgaat tgggttgtaa ggaacttggc cgacctcgaa gtccagatgg gcgcagtgaa
     4201 gaaagtgaac agtttcttaa ctatggagtc tgagaactat gaaggcacca tggatccttc
     4261 tcaagtccca gagcattggc cacaggaagg tgagatcaag attcacgatc tatgcgtcag
     4321 atatgaaaat aacctgaagc ccgttctgaa acatgtcaag gcttacatca agcctgggca
     4381 gaaggtgggc atctgtggtc gcaccggtag tgggaagtcc tctctatctc tggctttctt
     4441 cagaatggtc gacatatttg atggaaagat agtcattgat ggaatagaca tttccaagct
     4501 gcccttgcac acgctccgct ctagactgtc catcattctc caggacccaa tcctgttcag
     4561 cggctctatc agatttaact tggatcctga atgcaagtgc acagacgaca ggctctggga
     4621 ggctctggaa attgctcagt tgaagaatat ggtcaaatct ctgccaggag gcctagacgc
     4681 cactgtcacc gaaggtggtg agaacttcag cgttggacag agacagctgt tctgcctggc
     4741 cagggccttt gttcgaaaga gcagcatact cattatggat gaggccacgg cctccatcga
     4801 catggccacg gaaaacattt tgcagaaagt agtcatgaca gcctttgcgg atcgcacggt
     4861 tgtaaccata gctcatcggg ttcacaccat tctgactgct gacctggtca ttgtgatgaa
     4921 gagaggaaac attttggaat acgacacccc ggaaagcctc ttggcccagg aggatggagt
     4981 gttcgcctcg ttcgttcgtg cggacatgtg acaggattac atcacaacag cacctgtgtc
     5041 tcgatgccta ccgtcgccca ccagagggat cccccaactt tgcctcggaa gggtggcgcc
     5101 ggaaacttcg acagacttct gtatggaaag tagagatttc tgtttcctgt tttggtctga
     5161 gggacactcc ctgtaggttc atcgtgggtg ttgtactgtg atcaggccac actggaaagg
     5221 tagcctatgc taaaacatgc cagcgacctt aaggggtaaa tctgtcgatg tctgtcaagc
     5281 actggagctg aaatgagtcg tctgtgctac cacactctca ttaggaagac tagcactgcc
     5341 ctgctgttga tgaagaaaat tcattttcta acaaaatact cacgttcatg atccatagga
     5401 gagtcttttc tgtgcattta acattgttga tatttttttt taacttttcc ccttttaaat
     5461 catttcctgt caccacgaag ctatcatatt tagtacctct ataaagccga cccctcacaa
     5521 gagaaagatc atgaaaagag attgaatatt tgaaaatatt atttgtttcc atttgcctcc
     5581 atccaataag gaggaagttc aagttagctt cagtccttca gcaatgggcc acctaaacta
     5641 agctttctag agtttaattc tttatcagcc aaacaatggc tctgaaccct gaaatgctat
     5701 attatctagg gcccaaaaga atatagatga atggccttat ctgtcacaca cacagacaca
     5761 cacacacaca cacacacaca cacatataca tacacatctt catgccatat cttggctgta
     5821 tgctaatctt ggcatgtgca cattcctcga aggttccaga tatcccctac cctacatctc
     5881 tgtgggaaga tagaaatagt tcccactctg aatctacaca ggtagcaagt gtttattttc
     5941 acttgggcaa atttcagtgg cagacattga tgtcacacat gtggccattg gtcctgttct
     6001 aatttataga gtgtaccaga agtctatatg atattagtgt cacatttcat ttaactgccc
     6061 attaataaag ccaaactgac tgaagttcac ttccctgtta tcccagcttc cacagtttct
     6121 gtaaccttta accatcagat ataagcactg ctcaattcca tatgagggtc tccacagaaa
     6181 atagatgccc catccccacc gttcctgtag tcatattgcg ttctttattc tgtgtcaaga
     6241 cttatagttc ttgtgcatcg agatatttca aggtgccttt atggatatag aacgtaatat
     6301 aagaaaaacg ttcatagaga tagacagaaa cggcccaggt tacttagcct aattagtcac
     6361 cttttcttcc atatcaaaaa cttcattaga aaaaaataat agtattattt gcagaaagct
     6421 agtaggtcac agctattagc aatgagttca acctcaaaag tacttcataa gagaatcgac
     6481 taatctacta aaatattgct ggtgtgagaa ggttctgctg gggctggata cccatgacgt
     6541 ttgttgtcag tcagtgtctc cttctctcct agaaatggca ttcatctaca gaagtagctc
     6601 cctcgctgta gcccactacg ccatcctgtg caaaagtgac tttcgtttcc tcgaaacttt
     6661 tacttacttg atttgcaaaa aacaaacaaa caaaaaaaaa aacaaacaaa caaaacacct
     6721 accaaacgaa gtctggtgac atctcagtca gtcgatcagg aattgcgttg tctgggtgac
     6781 ctgcaatgac agaaaggagc ttttactgta gttaagactg taagaaaaga aaatcgcctc
     6841 cacagagtta aattttacat cgatataacc aaatcgaatt cacacagatt gatcctatcc
     6901 tgtctgtgaa aagcaagaag tgcagatgtg ttcatgataa aatgacaggg ttgttggggt
     6961 cgccctgtgt ataaggatcg ctttcctcaa aggttgtggc gcacacaccc tgccactact
     7021 cctcatgact cttctagatg taggttagac actgaaagat ctttctaagc atctggtgtg
     7081 atcaggacct tatcttgtcc atcttcctgt gcccttggca ctaaaacaag tgcatggctc
     7141 caaataaata aagtggtttc tccccggact tcttctttta tttttctttt aacttctcgt
     7201 catgtggcta taactgtggg ctcctcttga cttcctcttt actacgctta tcctatttat
     7261 tctcagtata tggaattcat ttattatgcg cactgtatgt tttctctctg tagtacatga
     7321 gagcttattg gcttacctta tataataaat taaccctttg tttacccaa
//
