LOCUS       XM_039085087            4926 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ATP binding cassette subfamily C
            member 3 (Abcc3), transcript variant X2, mRNA.
ACCESSION   XM_039085087
VERSION     XM_039085087.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051345.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039085087.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4926
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="10"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4926
                     /gene="Abcc3"
                     /gene_synonym="Mlp2; Mrp3"
                     /note="ATP binding cassette subfamily C member 3; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 6 ESTs, 4 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 31 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:140668"
                     /db_xref="RGD:71101"
     CDS             721..4359
                     /gene="Abcc3"
                     /gene_synonym="Mlp2; Mrp3"
                     /codon_start=1
                     /product="ATP-binding cassette sub-family C member 3
                     isoform X1"
                     /protein_id="XP_038941015.1"
                     /db_xref="GeneID:140668"
                     /db_xref="RGD:71101"
                     /translation="MGACFKLIQDLLSFINPQLLSILIRFISDPTAPTWWGFLLAGLM
                     FVSSTMQTLILHQHYHCIFVMALRIRTAIIGVIYRKALTITNSVKREYTVGEMVNLMS
                     VDAQRFMDVSPFINLLWSAPLQVILAIYFLWQILGPSALAGVAVIVLLIPLNGAVSMK
                     MKTYQVQQMKFKDSRIKLMSEILNGIKVLKLYAWEPTFLEQVEGIRQSELQLLRKGAY
                     LQAISTFIWVCTPFMVTLITLGVYVCVDKNNVLDAEKAFVSLSLFNILKIPLNLLPQL
                     ISGMTQTSVSLKRIQDFLNQDELDPQCVERKTISPGRAITIHNGTFSWSKDLPPTLHS
                     LNIQIPKGALVAVVGPVGCGKSSLVSALLGEMEKLEGAVSVKGSVAYVPQQAWIQNCT
                     LQENVLFGQPMNPKRYQQALETCALLADLDVLPGGDQTEIGEKGINLSGGQRQRVSLA
                     RAVYSDANIFLLDDPLSAVDSHVAKHIFDQVIGPEGVLAGKTRVLVTHGISFLPQTDF
                     IIVLADGQITEMGHYSELLQHDGSFANFLRNYAPDENQEANEGVLQHANEEVLLLEDT
                     LSTHTDLTDTEPAIYEVRKQFMREMSSLSSEGEGQNRPVLKRYTSSLEKEVPATQTKE
                     TGALIKEEIAETGNVKLSVYWDYAKSVGLCTTLFICLLYAGQNAVAIGANVWLSAWTN
                     DVEEHGQQNNTSVRLGVYATLGILQGLLVMLSAFTMVVGAIQAARLLHTALLHNQIRA
                     PQSFFDTTPSGRILNRFSKDIYVIDEVLAPTILMLFNSFYTSISTIVVIVASTPLFCV
                     VVLPLAVFYGFVQRFYVATSRQLKRLESVSRSPIFSHFSETVTGTSVIRAYGRVQDFK
                     VLSDAKVDSNQKTTYPYIASNRWLGVHVEFVGNCVVLFSALFAVIGRNSLNPGLVGLS
                     VSYALQVTLSLNWMIRTLSDLESNIIAVERVKEYSKTETEAPWVLESNRAPEGWPRSG
                     VVEFRNYSVRYRPGLELVLKNLTLHVQGGEKVGIVGRTGAGKSSMTLCLFRILEAAEG
                     EIFIDGLNVAHIGLHDLRSQLTIIPQDPILFSGTLRMNLDPFGRYSDEDIWRTLELSH
                     LSAFVSSQPTGLDFQCSEGGDNLSVGQRQLVCLARALLRKSRVLVLDEATAAIDLETD
                     DLIQGTIRTQFEDCTVLTIAHRLNTIMDYNRVLVLDKGVVAEFDSPVNLIAAGGIFYG
                     MAKDAGLA"
ORIGIN      
        1 gatctcagat gctgtagatg ggagcaaggc ctggatgggc acctgctctc cctgcttcag
       61 ctgaggacca ggggatgctg acacttgtgt cccgctcagt gtatagtaag ctcagctctt
      121 agctcagtgt atagtaagct cagctcttag ctcagtgtat agtaagcaca gctcttagcg
      181 taatagagca cctcgttcac tttctcagca gcccaacagt gttctctcca tttgtccctt
      241 gacccagaga gggggcagtg aagcttggag gtttgatgac ccagccaagg tctccccacc
      301 tatgttgaca gagcaatagg ccacacccag ctggcccgga gagagaagcc ctatctgatc
      361 tctgttttgc tgtgcttgat ctgaatcaga aactgcaggg gtttcctagg gagggcagga
      421 ccagccctcc caatccggcc tctcttgtct ggaggcaggc cagaatgaga gagcctaaga
      481 ctggggacct ttgagctgtc aacctcgcat ccaggaccca cagccgagcc tttttccctc
      541 ttgcccacaa cccagagttt agaagtcagt gcttggtcat cccagggcca ctggccccag
      601 actgcagccc ttgagccaaa gatcgcaggt gaggatgagg tcctgctgaa ggcccgcccc
      661 aagaccaaga agccttcctt tctgagggct ttggtgagaa ccttcacctc cagcttgctc
      721 atgggtgcct gcttcaagct gatccaggac ctgctctcct tcatcaaccc acagctgctc
      781 agcatcctca tcaggtttat ttctgacccc acggccccta cctggtgggg cttcttgctg
      841 gccggactga tgttcgtgag ctccaccatg cagacattga tcttacacca acattaccac
      901 tgcatctttg tgatggcctt gaggatacgg actgctatca taggcgtcat ctacaggaag
      961 gctctgacca tcaccaactc agtcaaacgt gagtacactg tgggagaaat ggtcaacctc
     1021 atgtcggtgg acgcccagcg cttcatggat gtctccccat tcatcaacct gctgtggtct
     1081 gcacctttgc aggtcatcct ggcgatatac ttcctctggc agatcttagg cccatcagcc
     1141 ctggctgggg tggctgtgat agtcttgctg ataccactca atggagctgt gtccatgaaa
     1201 atgaagacct accaggtaca gcaaatgaag ttcaaagact cccgcatcaa actgatgagt
     1261 gagatcctga atggcatcaa agttctgaag ctgtacgctt gggagcccac cttcttggag
     1321 caggtagaag gaatcaggca gagtgagctc cagctactgc ggaagggcgc ctacctgcag
     1381 gctatctcta ccttcatctg ggtctgcacc ccgtttatgg tgaccctgat caccctcggg
     1441 gtgtacgtgt gtgtggacaa gaacaatgtg ctggatgctg agaaggcctt cgtgtccctg
     1501 tccttgttca atatcttaaa gatccccctc aacctgctgc ctcagttaat cagtggcatg
     1561 acccagacca gcgtgtctct gaaacggatc caggatttcc tgaaccaaga tgaacttgac
     1621 ccccagtgtg tggaaagaaa gaccatctcc ccaggccgtg ccatcaccat acacaacggc
     1681 accttctcct ggtccaagga cctgcctccc acccttcaca gcctaaacat tcaaatcccg
     1741 aagggggcat tggtggctgt ggtgggacct gtgggctgtg ggaagtcttc cctggtgtct
     1801 gccttgctcg gagagatgga gaagctggaa ggtgcagtgt ctgtaaaggg ctctgtggcc
     1861 tacgtgcccc agcaggcgtg gatccagaac tgcacacttc aggaaaatgt gctatttggc
     1921 caacccatga accccaagcg ctaccaacag gctctggaga cgtgtgccct gctagctgac
     1981 ctagatgtgc ttcctggtgg ggaccagaca gagattggag agaagggcat taacctatct
     2041 ggaggccagc gacaacgggt gagtttggcc cgagctgttt atagtgacgc caacattttt
     2101 ttgctggatg acccactgtc ggctgtggac tctcacgtgg ctaagcatat cttcgaccaa
     2161 gtgattggac cagaaggtgt gctggcaggc aagactcggg tgctggtaac ccatggcatc
     2221 agcttcctgc cccagacgga ctttatcatt gtgcttgctg acggacagat tactgagatg
     2281 ggtcactact ccgaactcct gcagcacgat ggctcctttg ccaacttcct ccgaaactat
     2341 gcaccagatg aaaaccagga ggccaatgaa ggagtcttgc aacatgcaaa tgaggaggtg
     2401 ctcctgcttg aagacacact cagcacccac acagacctga cagacaccga gccagccata
     2461 tacgaggtcc gcaagcagtt catgagagag atgagctcct tgtcttctga aggagagggc
     2521 cagaaccggc ctgtgctcaa gagatatacg agttcactgg agaaggaggt gccggcgaca
     2581 cagactaaag agactggtgc attaatcaaa gaggagatcg cagagacagg caatgtgaag
     2641 ctgagcgtgt actgggatta tgccaagtct gtggggctct gcaccacgct gtttatctgc
     2701 ctcctgtatg ctggccaaaa tgcggttgct atcggagcca atgtgtggct cagtgcctgg
     2761 accaatgatg tggaggaaca tggccagcag aacaacacct ccgtaaggct gggagtctac
     2821 gccaccctag gaatactgca agggctcctg gtcatgctgt cggccttcac catggtggtt
     2881 ggcgctatcc aggctgcccg cctgctgcac acagctctgt tgcacaacca gatccgtgcg
     2941 cctcagtcct tctttgacac gacgccctca ggccgcatcc tcaatcgttt ctccaaggac
     3001 atatacgtca tcgatgaggt tctggccccc accatcctca tgctgttcaa ttcattctac
     3061 acatccatct ccaccattgt ggtcatcgtg gccagcacgc cactcttctg cgtggttgtt
     3121 cttcctctgg ctgtgttcta tggcttcgtg cagcgcttct atgtggccac atcgaggcag
     3181 ctgaagagac tggaatccgt tagccgctcg cccatcttct cccacttctc ggagacagta
     3241 actggcacca gtgtcattcg ggcctacggc cgagtccaag acttcaaggt cctcagtgat
     3301 gctaaggtgg atagcaacca gaagaccact tatccttaca tcgcctccaa ccggtggctg
     3361 ggtgtccacg tggagtttgt ggggaactgc gtggtgctct tctccgcgct gtttgcagtg
     3421 atcgggagaa acagcttgaa tccagggctt gtgggtcttt ccgtgtccta tgccttacag
     3481 gtgaccttga gtttgaattg gatgatacgg acgctatccg acctggagtc taatatcata
     3541 gccgtggaga gagtcaagga gtactctaag acggagactg aggctccctg ggtgttggag
     3601 agcaaccgtg ctccagaagg ctggcccagg agtggggtgg tagagttccg gaactattcg
     3661 gtgcggtacc gcccgggcct cgagttggtg ctgaagaatt tgactctgca tgtgcagggt
     3721 ggggagaagg taggcatcgt gggccgcact ggggctggca aatcttccat gactctttgc
     3781 ctattccgaa tcctggaggc cgcagagggt gagatcttca ttgacgggct caatgtggca
     3841 cacattggcc tccatgacct gcgttcacaa ctcaccatca tccctcagga ccccatcctg
     3901 ttctcgggca cgctgcgcat gaacctcgat ccctttggcc gttactcgga cgaggacatc
     3961 tggaggaccc tggagctatc ccacctgagt gcatttgtga gcagccagcc gacaggcctg
     4021 gattttcagt gctctgaggg tggggataat ctcagtgttg gccagaggca gctcgtgtgc
     4081 ctagcccgag ccctgctccg aaagagccgt gtcctggttt tagacgaggc caccgctgcc
     4141 attgacctgg agactgatga cctcatccag ggtaccatcc gtacccagtt tgaagactgc
     4201 actgtactga ccatcgccca ccggctcaac acaatcatgg actacaaccg ggtcctggtc
     4261 ttggacaaag gagtagtagc tgaatttgat tctccagtaa acctcattgc agctggaggc
     4321 atcttctatg ggatggccaa agatgcagga ctcgcctaga atctgcattc caaaggtttc
     4381 ttccttgtct gaatcggaca gcaagtagct gcagcatgga tttgatggca acgagtgggg
     4441 acatttgagt tggttttggt ttttttttgt tttttgtttt tttttttttt tttaaattct
     4501 gcaaattgcc ttacagacta gccatactta acagtggaat gaggaagtgg gtccttggag
     4561 gtcacagcca gttcacagcc aagttcagac cagtccctgg gtctcctaga cctagtctac
     4621 cattattccc gtactgcatt tttttttggt tctttttttc agagctgggg accgaaccca
     4681 gggccttgcg cttcctaggt aagcgctcta ccactgagct aaatccccag cccccgtact
     4741 gcagttttta agagaccctg ctcctgcctc tacatattca tagtttccaa tttttttttt
     4801 aaatgagcct ttctccttct ggaccaggga ctgctaggtc agtctgtccg gggaacagaa
     4861 tccctggttg gtgctgtctg aatccactga cgaaataaag ccatgagcag cagcatttgt
     4921 accaca
//
