LOCUS       XM_006240713            4189 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus ATP binding cassette subfamily B
            member 5 (Abcb5), mRNA.
ACCESSION   XM_006240713
VERSION     XM_006240713.3
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051341.1) annotated using gene prediction method: Gnomon.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_006240713.4.
            
            On Jan 21, 2021 this sequence version replaced XM_006240713.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4189
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="6"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4189
                     /gene="Abcb5"
                     /note="ATP binding cassette subfamily B member 5; Derived
                     by automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 18 Proteins, and 38% coverage of the annotated genomic
                     feature by RNAseq alignments"
                     /db_xref="GeneID:314537"
                     /db_xref="RGD:1566342"
     CDS             1..3768
                     /gene="Abcb5"
                     /codon_start=1
                     /product="ATP-binding cassette sub-family B member 5"
                     /protein_id="XP_006240775.1"
                     /db_xref="GeneID:314537"
                     /db_xref="RGD:1566342"
                     /translation="MAHSERANGLQESNQRYGSLQEQLPKAGNQAVGPIEIFRFADNL
                     DIVLMTLGILASMINGATVPLMSLVLGEISDHFINGCLVQTNKTKYQNCSQSQEKLNE
                     DIIMLTLYYVGIGAAALVLGYVQISFWVITAARQTTRIRKQFFHSILAQDISWFDGTD
                     ICELNTRMNGDISKLCDGIGDKIPLMFQNISGFSIGLVISLIKSWKLSLAILSTSPLI
                     MAASALCSRMVISLTSKELDAYSKAGAVAEEALSSIRTVTAFGAQEKEIQRYTQNLKD
                     AKDAGIKRAIASKLSLGAVYFFMNGAYGLAFWYGTSLIFGGEPGYTVGTILAVFFSVI
                     HSSYCIGSVAPHLETFTIARGAAFNIFHVIDKKPNIDNFSTAGYKPESIEGNIEFKNV
                     SFSYPSRPSAKILKGFNLKIKSGETVALVGPSGSGKTTTVQLLQRLYDPEEGCITVDE
                     NDIRTQNVRHYREQIGVVSQEPVLFGTTIGNNIKFGREGVSEEEMEQAAREANAYDFI
                     MAFPKKFNTLVGEKGAQMSGGQKQRIAIARALVRNPKILILDEATSALDTESESLVQA
                     ALEKASKGRTTLVVAHRLSTIRGADLIVTMKDGEVVEKGIHAELMAKQGLYYSLAVAQ
                     DIKKVDEQMESRTCSAAGNASNGSLCNVNSAKSPCTDQFEEAVPHQKTTLPEVSLLKI
                     FKLSKSEWPFVVLGTLASALNGSVHPAFSIIFGKLVTMFEDKNKTTLKQDAELYSMML
                     VVLGIVALVTYLMQGLFYGRAEEILAMRLRHSAFKAMLYQDMAWYDEKDNSTGALTTT
                     LAVDVAQIRGAATSRLGIITQDVTNMSLSILISFVYGWEMTLLILSFAPILAVTGMIQ
                     TAAMAGFANKDKQELKRAGKIATEAVENIRTVVSLTREKAFEHMYEETLRTQHRNALK
                     RAHITGSCYAVSHAFVHFAHAAGFRFGAYLIQAGRMTPEGMFIVFTAIAYGAMAIGET
                     LVWAPEYSKAKAGAAHLFALLKNKPSIDSCSQNGEKPDACEGNLEFREVSFFYPCRPE
                     VPVLQDMSLSIEKGKTVAFVGSSGCGKSTCVQLLQRFYDPMKGQVLLDGVDVKELNVQ
                     WLRSQTAIVSQEPVLFNCSIAENIAYGDNSRMVPLEEIKEVADAANIHSFIEGLPGKY
                     STQVGLRGMHLSGGQKQRLAIARALLRKPKILLLDEATSALDNESEKMVQQALDKARR
                     GRTCLVVAHRLSTIQNADMIVVLQNGRIKEQGTHQELLRNGETYFKLATAH"
ORIGIN      
        1 atggcacatt ctgaaagagc caacgggttg caagaaagta atcagagata tggatctctg
       61 caagaacaac tgcctaaagc aggaaatcaa gctgtcggac ctattgagat attccgtttt
      121 gctgataatc tggacattgt cctcatgact ctgggaatac tagcatcgat gataaatgga
      181 gccactgttc ctttaatgtc cctggtttta ggagaaataa gtgaccattt tattaatgga
      241 tgcctagtcc aaactaacaa aactaaatat cagaactgtt ctcagtctca agaaaagttg
      301 aatgaagata tcattatgtt gactctctat tatgttggga taggagcagc tgccctcgtt
      361 ttgggctacg tgcagatttc cttttgggtc ataaccgcag cccggcaaac cacaagaatc
      421 cgaaaacagt tttttcattc gattttggca caagacatca gctggtttga tggcactgac
      481 atctgtgaac ttaacacccg catgaatggt gacatcagca aactctgtga tggtattgga
      541 gataagatcc ctctgatgtt tcagaatata tctgggtttt ctattggcct cgtgataagc
      601 ttgataaaga gctggaaact ctcgctggcg attctgtcca cgtctcctct cataatggct
      661 gcatcagcac tgtgctctag gatggtcatc tcattgacca gtaaggagct ggatgcctat
      721 tccaaagctg gggctgtagc tgaagaagct ttgtcatcaa tccgaacagt cacagccttt
      781 ggagcccaag agaaagaaat tcaaaggtat acacagaatc taaaggacgc caaggacgct
      841 ggcataaaga gggctatagc ttcaaagctg tctcttggag ccgtctactt ctttatgaat
      901 ggagcctacg gactggcttt ttggtatgga acctccttga tttttggtgg agaacctggt
      961 tacaccgtcg ggactattct tgctgttttc ttcagtgtga tccacagtag ttactgcatc
     1021 gggtctgtag cccctcactt ggaaaccttc actatagcca gaggagccgc ttttaatatc
     1081 tttcatgtta ttgataagaa acccaatata gataactttt caacagctgg atataaacct
     1141 gaatctatag aaggaaacat agaatttaaa aacgtttctt tcagctatcc atcaagacct
     1201 tctgccaaga ttctgaaagg cttcaatctc aagattaagt ctggagagac agtagctttg
     1261 gttggtccca gtggcagtgg caagactacc acagtccagc ttctgcagag gctgtatgac
     1321 ccagaagagg gctgtatcac ggtagatgag aatgacatcc gaacccaaaa cgtgcgacat
     1381 taccgagagc aaattggagt ggtcagccaa gagccggttt tgtttggtac caccatcggt
     1441 aacaatatta agtttggccg tgaaggcgtg agtgaagaag aaatggagca ggcagcgagg
     1501 gaggcaaacg cctacgactt cataatggcc tttcctaaga aatttaatac actagtaggg
     1561 gaaaaaggag ctcagatgag tggaggccag aaacagagaa tcgccattgc tcgagcgcta
     1621 gttcgaaacc ccaaaattct aatcctagat gaggctacat ctgccctcga cacagagagt
     1681 gagtcacttg ttcaagccgc actggagaag gcaagcaaag gccggactac acttgtggta
     1741 gcacaccggc tctccactat tcgtggggca gacctgattg tgacgatgaa ggatggcgag
     1801 gtggtggaga aagggatcca tgctgaacta atggcaaagc agggactgta ctactccctc
     1861 gctgtggcac aggatattaa aaaggtcgat gaacaaatgg agtcaaggac atgctccgct
     1921 gcagggaatg ccagcaatgg ttctctgtgc aatgtgaata gcgccaagtc cccctgcact
     1981 gaccagtttg aggaagctgt accccatcaa aagacaactc ttcctgaagt ttcactatta
     2041 aaaatattta aattaagcaa gtccgagtgg ccttttgtgg ttctgggaac tttggcttct
     2101 gctttaaatg ggtctgttca cccagcattt tccatcatct ttggaaaatt ggtcactatg
     2161 ttcgaagata aaaataaaac tacattaaag caggatgcag agctctactc tatgatgtta
     2221 gtcgtcttgg gcatagtggc tcttgtcacc tacttgatgc aggggttgtt ttatggcaga
     2281 gcagaagaaa ttttagccat gaggttaaga cactcagcat tcaaagccat gctctatcag
     2341 gatatggcct ggtatgatga gaaagacaac agcactggag ccctgaccac aacgttagct
     2401 gtggacgtag cacagatccg gggtgcagca acttcaaggc ttggtatcat aacacaagat
     2461 gtgaccaaca tgagtttgtc catccttatc tccttcgtct atggatggga gatgacactc
     2521 ctgattctca gctttgcacc tatacttgca gtgacaggaa tgattcaaac tgcagcaatg
     2581 gctggcttcg ccaacaagga taagcaagag cttaagcgtg ccgggaagat agcaacagaa
     2641 gctgtggaga acatacgtac ggtagtgtca ttaacaagag agaaagcctt tgagcacatg
     2701 tatgaggaga cgctacggac ccaacacaga aatgccttga agagagcaca tatcactgga
     2761 agctgttatg cggtcagcca tgcttttgtg catttcgccc acgcagcagg tttccggttt
     2821 ggagcctatt tgattcaagc tggacggatg acgcccgaag gcatgttcat agtctttact
     2881 gccattgcat atggggctat ggccattgga gaaacgcttg tttgggctcc tgaatattcc
     2941 aaagccaagg ctggagctgc acatctgttt gctttgctga aaaataagcc aagtatagac
     3001 agctgcagtc aaaatggaga aaaaccagac gcctgtgaag ggaacttaga atttcgagaa
     3061 gtctcgttct tctatccttg tcggccagaa gttcctgtcc ttcaagacat gtccctcagc
     3121 attgagaaag ggaagacagt agcatttgtt gggagcagtg gctgtgggaa aagcacgtgt
     3181 gttcaactgc tacaaagatt ttatgacccc atgaaaggac aagtgctgct tgacggcgtc
     3241 gatgtgaaag aattgaacgt gcaatggctg cgttcccaga cagccatcgt ctcccaagag
     3301 cctgtgctct tcaactgtag cattgctgag aacattgcct atggtgataa cagccgcatg
     3361 gtgcccttag aggagatcaa agaggtcgca gatgcagcca acatccattc tttcattgaa
     3421 gggctccccg ggaaatacag cacccaagtg ggactaagag gcatgcacct ttctggcggc
     3481 cagaaacaaa gactggctat tgcaagggct cttctccgga agccgaaaat tttactgctg
     3541 gatgaggcca cttcagccct tgacaatgag agcgagaaga tggttcaaca ggccctcgac
     3601 aaagcccgga gagggaggac ctgcctagta gtggctcaca gactctccac aatacagaat
     3661 gcagatatga tcgtcgttct gcaaaatgga agaatcaagg agcaggggac tcatcaggag
     3721 ctcctgagaa atggagagac ttactttaaa ttagcaaccg cgcattagta gtggcgccag
     3781 caggtgcact gacgctgccg gccttgcttg cacttggatc ttggcggaat gaagagtaca
     3841 cagtcatttc ttggcctgct ctagactctt actgcaatgt caatacttag aatcctgaca
     3901 ttcaagtaca gacatgttct gtctaactgt cttctcttta gattttcaaa agcaaaccaa
     3961 gggggctgga gaggtggtct gcggtttaga gcactggcta tggtcttctg gagggcccgg
     4021 gtttgagtct cagcatccac ataatggctc acaaccactt ggaactccag ttccatgggg
     4081 tccacgaaac tattctggcc tctgtgggta ccaggcacac atgtgtagca catccaagaa
     4141 cacgtgcaag aaaaaatata attttttagt taagtagaaa aaaaatcaa
//
