LOCUS       XM_039108844            4639 bp    mRNA    linear   ROD 11-JUN-2023
DEFINITION  PREDICTED: Rattus norvegicus alpha-2-macroglobulin-like 1 (A2ml1),
            mRNA.
ACCESSION   XM_039108844
VERSION     XM_039108844.1
DBLINK      BioProject: PRJNA677964
KEYWORDS    RefSeq.
SOURCE      Rattus norvegicus (Norway rat)
  ORGANISM  Rattus norvegicus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Rattus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_051339.1) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            [WARNING] On Feb 22, 2024 this sequence was replaced by
            XM_039108844.2.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_015227675.2-RS_2023_06
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.1
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 06/06/2023
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4639
                     /organism="Rattus norvegicus"
                     /mol_type="mRNA"
                     /strain="BN/NHsdMcwi"
                     /db_xref="taxon:10116"
                     /chromosome="4"
                     /sex="male"
                     /tissue_type="kidney"
                     /geo_loc_name="USA: Wisconsin, Milwaukee, Medical College
                     of Wisconsin"
                     /collection_date="2019-03-08"
                     /collected_by="Rebecca Schilling"
     gene            1..4639
                     /gene="A2ml1"
                     /note="alpha-2-macroglobulin-like 1; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 11
                     ESTs, 1 Protein, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 1 sample
                     with support for all annotated introns"
                     /db_xref="GeneID:362442"
                     /db_xref="RGD:1565709"
     CDS             77..4453
                     /gene="A2ml1"
                     /codon_start=1
                     /product="ovostatin homolog"
                     /protein_id="XP_038964772.1"
                     /db_xref="GeneID:362442"
                     /db_xref="RGD:1565709"
                     /translation="MVPTIVLSALVLHLTNVVASEPRYLLWVSAVVQRFSSEKACLHL
                     VNLNEPVSLSVILEYAGVNTTIFDQRVKEGNFYACANFKVSHVSPEQLAFVTLLVQQN
                     TLIISERRAVAVAAEENATFVQTDTPVHKPGDTVHFRVVTLNTWLKPVDELYPLITVQ
                     NPQGNVIFQWINVTTFRNITQLSFQLTPEPVLGDYMIVIKKQSGMTVVDHFTVNQDVL
                     PRFEVELTAPETITIADNQFPVVMCAKYIYGQPVRGKAQIKVCRELFSPGYCESNENE
                     ICEQFTLQLKDGCASYIVNTKVFQLYRSGLFMTLNINGVITESGTGVQISKTHSVFIT
                     SVLGTVSFENMDSFYRRGIPYFGTLKFSGPNNTPMVNKLLQLELDGKPLGNYTTDEKG
                     EAQFSINTSEIFEAQMSLKATYVRPRSCHRSSWLDPEYLDAYFSASRFYSQTSSFMKI
                     ILEPKPLPCDQEKMVSVLYSLNPEVYKEASKVTFFYLVMVRGSILLSGQTEVKVQAQN
                     GNFSFPIIVTADLAPAADLFVYTLHPSGEIVADSVKLQTEKCFKNKVSIKFSKEQDLP
                     GSNTSLHLQAAPGSFCALRAVDKSALLLNHGQEMTPESVYNMLPYVHQYGYFYNGLNL
                     DDERADPCIPQKDLFHNGLYYKPTSNVWDGDLSNLVRNMALKIFTNIRYRKPEVCSSQ
                     ENQPLLRTFNDPNERIMMYGGGGGGGAPAASAFHDAPDSISHAKVAIKETVRTNFPKT
                     WLWNLISVDSSGSTNVSFLVPDTITQWQASTFCVNGNAGFGISPKVSLQISQPFFMEV
                     TSPFSVVRSEQSDLIVTVFNYRTTCVEISVQLEASENYEASINTQSNTDSEVLPAGEQ
                     KTYVWTVTPKTLGKVNITVVATSKQSSACPNDAHEEQDVNWKDTVVKTLLVEPEGIEK
                     ESTQSFLICPKGTKASKQITLELPNDVVEGSARSFVTFVGDILGVAMQNLESLLQTPY
                     GCGEQNIAQLAADIYILDYLNATKQLTEEVRSKALLLLSKGYQKHLSFKNYDGSYDVF
                     CHNNQEGSVWLSALSFKTFEKMKEYIFIEETVPKQTLIWLVKKQKSNGCFRKNENLVN
                     NAQEDSDEDDIALTAYVVGAFLEGGLNSSFPALRNGLYCLEEAFSSSVTDDHTQAIMA
                     YVFTLAGKQQQVKSLLPILDRSATKTNNMIYWEKDEKPKADSSPSFIPSALSGETEKT
                     CYVLLAVLSQDTPDLDYASKIVQWLAQRMNSHGGFSAVQDTTVCLLALTRYMKLTGSN
                     PQNTITLSTEESEEVFHINRDNRLLVQHSKVSEGHRRYTVDVEGDGCSFTQATLRYNV
                     PLPKEASGFSLSVKTRKSNSSDELQTKFDLMVTLTYTGAHESSGTVLVDVRMLSGFTP
                     VFSSIEELKFNGQAMKTDIKNGHVLFYLKNVPKAATSFTFSIEQTNLVVNIQPAPVTV
                     HSYEKDEYAFDSYNINSISDSQ"
ORIGIN      
        1 cctaggtagc tgacttccag cgagaggagg gaaaaggcag cttcttctga agttaccgtc
       61 caggcgctga gacgacatgg tgcctaccat cgtgctcagt gccctcgtgc ttcatctcac
      121 taacgttgtg gcttcagaac cgcgatacct cctgtgggtt tctgctgtgg tacagcggtt
      181 ttcctcagaa aaagcctgcc ttcaccttgt aaacctcaac gagcctgtgt ccttgagcgt
      241 catcctagag tatgccggag tcaacactac tatttttgac cagcgtgtga aagaggggaa
      301 cttctatgct tgtgcaaatt tcaaagtgtc tcacgtgtcc ccggagcagt tggcctttgt
      361 gacactactt gttcagcaaa acactcttat aatctctgag agaagagctg tagcagtcgc
      421 tgccgaggag aacgccactt ttgtgcagac agacacaccg gtccacaaac ctggagacac
      481 ggttcacttt cgagttgtga cactgaacac ctggctgaag cctgttgatg aattgtaccc
      541 tttgatcacc gttcagaatc cccaaggcaa tgtgattttt caatggataa acgtgaccac
      601 tttcagaaac atcacccagc tctcattcca actgactcca gagccagtat tgggggatta
      661 catgatcgtc ataaaaaaac aatcaggaat gacggtggtg gatcatttca ccgttaacca
      721 agatgtattg cccagatttg aagttgagct tactgctcca gagaccataa ctatcgcaga
      781 caatcagttt ccagtggtta tgtgtgcaaa gtacatctat ggccaacctg tgcgtggaaa
      841 agcccagatc aaagtgtgca gagagctctt ctccccgggg tattgtgaga gcaacgagaa
      901 tgaaatctgc gagcagttca ctctgcagct gaaagatggc tgtgcttctt acattgtcaa
      961 tacgaaagtc ttccagctgt accgctctgg gttgttcatg acgttgaata tcaacggagt
     1021 cattacagaa tctggaacag gtgtacagat cagtaagaca cactcagttt ttatcacctc
     1081 agtgcttggc actgtcagct tcgagaacat ggactctttc tacaggagag ggatccctta
     1141 ttttggaact cttaaatttt ctggccccaa taacacaccg atggtgaaca agcttttgca
     1201 actggagctc gatggcaaac ctctagggaa ttacaccaca gatgagaagg gggaagctca
     1261 attttccatt aacacttcag agatattcga ggcacagatg agcttaaaag ccacatatgt
     1321 ccgacctaga agctgccatc gttccagctg gttggaccct gagtatttgg acgcctactt
     1381 ctcagcctca cgcttttact cccagaccag cagcttcatg aagatcattc tcgagccaaa
     1441 gccgcttccg tgcgaccaag agaagatggt ctcagtgctt tactccctaa accccgaggt
     1501 ttacaaggag gcctcaaaag tgaccttctt ttatttggtg atggtgagag gaagcatcct
     1561 cctcagtgga cagacagaag tcaaagttca agcccagaat ggaaacttct ccttcccaat
     1621 catcgtcact gctgatctgg cgccagcagc tgacctgttt gtctacaccc tccaccccag
     1681 cggggaaatc gttgcagata gtgtcaagct ccagactgag aagtgcttta aaaacaaggt
     1741 tagcataaag ttctcaaagg agcaggacct acccggctct aacaccagcc ttcatcttca
     1801 agcggcccct ggctccttct gtgccctgcg agcggtggac aaaagtgccc ttctactgaa
     1861 ccacggacaa gaaatgacac cagagagtgt gtacaacatg ctcccgtacg tccatcaata
     1921 tggctatttc tacaatggtc tcaacttgga tgatgagaga gctgacccat gcatccctca
     1981 gaaggacttg ttccacaatg ggctgtatta taaacctaca agcaatgttt gggatggaga
     2041 cctctctaat cttgtcagga atatggctct gaaaatcttt acaaatatcc gttaccggaa
     2101 accggaagtg tgttcatccc aggaaaacca gcctttgctg aggacattca atgacccaaa
     2161 tgaacggata atgatgtacg gtggtggtgg tggtggtggc gcaccagctg cttctgcctt
     2221 tcatgacgct cctgacagca tcagccatgc aaaagtggcc atcaaagaga cagtcaggac
     2281 aaacttcccc aagacctggc tgtggaacct catcagcgtg gattcctcag gctcaaccaa
     2341 tgtttcgttc cttgtccctg ataccatcac ccagtggcag gccagcacct tctgtgtcaa
     2401 cggcaatgct gggttcggca tttcacccaa agtgtcccta caaatctccc agcccttctt
     2461 catggaagtt acctcaccct tttctgttgt tcgaagtgaa cagagtgacc tcattgtcac
     2521 tgtcttcaac taccggacta catgtgtaga gatttctgtt cagttagaag catctgagaa
     2581 ttatgaagca agcatcaaca cccagagtaa cactgacagt gaggtcctgc cggctggaga
     2641 acagaaaacg tatgtctgga ccgttacacc aaaaacactg ggtaaagtga atatcactgt
     2701 agtggctaca tccaaacaga gtagtgcctg cccaaatgat gcccatgagg agcaagatgt
     2761 caactggaag gacactgtag tcaaaacctt attggtagag cctgaaggta ttgaaaaaga
     2821 atcaacccaa agtttcctta tctgcccaaa aggtaccaaa gcctcaaagc aaataactct
     2881 ggaattgcca aacgatgtag tggaaggatc agccagatct tttgtcactt ttgtgggaga
     2941 cattctggga gtcgcaatgc agaatctaga gagccttctc cagacaccct atggctgcgg
     3001 tgaacagaac attgcccagc tggcagctga catttatata cttgactacc tcaacgctac
     3061 caaacagctg acagaagagg tcagatccaa ggctcttctt ctcttatcta aaggttacca
     3121 gaaacacttg tctttcaaga actatgatgg ctcatacgat gtgttctgcc ataacaacca
     3181 ggaaggaagt gtctggctca gtgccctttc tttcaagaca tttgagaaaa tgaaggaata
     3241 tattttcatc gaagagacgg tccccaaaca gaccttgatt tggcttgtga agaagcagaa
     3301 atcaaacggc tgctttagaa agaatgagaa tcttgtcaac aatgctcagg aggacagtga
     3361 cgaggatgat atcgcactta ctgcatacgt cgtcggggcg ttccttgaag gtggactcaa
     3421 ttccagtttt cctgccctcc gcaatggtct ctattgcctg gaagaagcat tttcgagtag
     3481 tgtcaccgat gaccacactc aagctatcat ggcttatgtg ttcacattag ctgggaagca
     3541 acagcaagtg aagtccttac tcccaatcct ggatcggtct gctacaaaaa cgaataatat
     3601 gatatactgg gagaaagacg agaaacccaa ggcagacagc tctccatcat tcattccttc
     3661 tgcactttcc ggtgagacag agaagacgtg ctatgtgctg ttggctgtcc tttcccagga
     3721 cactccggac ctcgattatg ccagcaagat tgtgcagtgg cttgcccagc ggatgaactc
     3781 ccatggaggc ttctctgccg tgcaggacac cacagtgtgc cttcttgccc tgacccgata
     3841 catgaagtta accggctcta accctcaaaa caccatcacc ctgagcacgg aagagtctga
     3901 ggaggttttc cacattaaca gagataaccg ccttctggta cagcactcaa aagtttccga
     3961 gggccacaga cgatacacgg tggatgtgga aggagacgga tgctcgttca cccaggctac
     4021 cctcaggtac aatgtgcccc ttcctaagga ggcctcgggg ttttcccttt ctgtgaaaac
     4081 cagaaagagc aactcttcgg atgaactcca gaccaagttt gacctcatgg tgaccctcac
     4141 gtatactgga gctcacgaaa gctccggtac agtccttgtg gatgtgagga tgctctctgg
     4201 ctttactcct gtcttctcat ctatcgagga gcttaaattc aatggtcaag cgatgaagac
     4261 ggacataaag aacggccatg ttcttttcta cttgaaaaac gttcccaagg cagcaaccag
     4321 cttcaccttc tctattgaac aaaccaacct tgtggtcaac atccagccag ccccagtcac
     4381 ggtccacagc tatgaaaaag atgaatatgc ttttgattct tacaacatca atagcatttc
     4441 agattcccag taagacaaag cagctcacag agaaaaaggt gtgagactat ttctttgaat
     4501 atacttttct cctggtcacc atcctaacag agagcctaac caagcacctc tcacatcctg
     4561 aaggatcttc catcacagtg acttcctgtc agcttcacgt ccttccttct ttccattaaa
     4621 tgcatcattt caagtctga
//
