LOCUS       XM_036166032            2075 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus zyxin (Zyx), transcript variant X4, mRNA.
ACCESSION   XM_036166032
VERSION     XM_036166032.1
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000072.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2075
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="6"
     gene            1..2075
                     /gene="Zyx"
                     /gene_synonym="9530098H06Rik"
                     /note="zyxin; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 20 mRNAs, 37 ESTs, 875 long SRA
                     reads, and 100% coverage of the annotated genomic feature
                     by RNAseq alignments, including 26 samples with support
                     for all annotated introns"
                     /db_xref="GeneID:22793"
                     /db_xref="MGI:MGI:103072"
     CDS             189..1586
                     /gene="Zyx"
                     /gene_synonym="9530098H06Rik"
                     /codon_start=1
                     /product="zyxin isoform X3"
                     /protein_id="XP_036021925.1"
                     /db_xref="GeneID:22793"
                     /db_xref="MGI:MGI:103072"
                     /translation="MIEEPFPPAPLEEDIFPSPPPPLEEEGGPEAPTQLPPQPREKVC
                     SIDLEIDSLSSLLDDMTKNDPFKARVSSGYVPPPVATPFVPKPSTKPAPGGTAPLPPW
                     KTPSSSQPPPQPQAKPQVQLHVQPQAKPHVQPQPVSSANTQPRGPLSQAPTPAPKFAP
                     VAPKFTPVVSKFSPGAPSGPGPQPNQKMVPPDAPSSVSTGSPQPPSFTYAQQKEKPLV
                     QEKQHPQPPPAQNQNQVRSPGGPGPLTLKEVEELEQLTQQLMQDMEHPQRQSVAVNES
                     CGKCNQPLARAQPAVRALGQLFHITCFTCHQCQQQLQGQQFYSLEGAPYCEGCYTDTL
                     EKCNTCGQPITDRMLRATGKAYHPQCFTCVVCACPLEGTSFIVDQANQPHCVPDYHKQ
                     YAPRCSVCSEPIMPEPGRDETVRVVALDKNFHMKCYKCEDCGKPLSIEADDNGCFPLD
                     GHVLCRKCHSARAQT"
ORIGIN      
        1 atccgttctc tgaagtgtaa cgggagctgc acggttcttc aacctggctc gttctcactc
       61 gacctgcttc gcccagggca tcctgagccc ctcgttatga ctttcctttg ccccctcctc
      121 cccttattgg ggagggcgac gactcagagg gtgccctggg aggtgccttc ccacctccac
      181 ctcccccgat gatcgaggaa ccattccccc ctgctcctct ggaggaggac atcttcccct
      241 cccctccacc tccactggag gaggagggag ggcctgaggc ccctacccag ctcccaccgc
      301 agcccaggga gaaagtgtgc agtattgacc tggagattga ctctctgtcc tcactgctgg
      361 acgacatgac caagaacgat cccttcaaag cccgggtatc atccggatat gtacccccac
      421 cagttgccac tccatttgtt cccaagccta gtaccaaacc tgcccctggg ggcacagcac
      481 ccttgcctcc ttggaagacc ccttctagct cccagccacc acctcagccg caggccaagc
      541 ctcaggtcca gctccatgtc cagcctcagg ccaagcccca tgtccaaccc cagcctgtgt
      601 cttctgctaa tacacagccc cggggtcccc tttctcaggc accaactcca gcacctaagt
      661 ttgctccagt ggctcctaaa tttactcccg tggtttccaa gttcagccct ggtgctccaa
      721 gtggacctgg gccacagccc aatcaaaaaa tggtgcctcc ggatgctcct tcttctgtga
      781 gcacaggctc ccctcagccc cctagcttca cctatgctca gcagaaggag aagcccctag
      841 ttcaagagaa gcagcaccca cagcctccac cagctcaaaa ccaaaaccag gtacgctctc
      901 ctggaggccc aggccccttg accctgaagg aggtagagga gttggagcag ctgacccagc
      961 agctgatgca ggacatggaa caccctcaga ggcagagcgt ggcagtgaat gagtcctgtg
     1021 gcaaatgcaa tcagccactg gcccgtgcac agcctgcggt tcgtgcactg ggacaactgt
     1081 tccacatcac ctgcttcact tgccatcagt gtcagcagca gctgcaggga cagcagttct
     1141 atagcctgga gggagcacca tattgtgagg gctgctacac cgacactttg gagaagtgca
     1201 acacctgtgg gcagcccatc actgaccgca tgctgagggc cactggcaaa gcctaccacc
     1261 cacagtgctt cacctgtgtg gtctgcgcct gtcccctgga gggcacctcc ttcattgtgg
     1321 accaggccaa tcagccccac tgtgtccctg actatcacaa gcaatacgct ccaaggtgct
     1381 ccgtctgctc ggagccaatc atgcctgagc ctggccgaga cgagactgtg cgagtagtgg
     1441 cgctggataa gaactttcat atgaagtgtt acaagtgtga ggactgtggg aaacctctgt
     1501 ccattgaggc agatgacaac ggctgtttcc ctctggatgg ccacgtcctt tgtcggaagt
     1561 gccactccgc tagagcccag acctgagttg agatggacct ccttccagac cacaggtccg
     1621 tcccccaccg tggaccaccc acactgaggc cagtccttgc ctctaccctc cctgcattcc
     1681 aatcccctcc cgagtctcaa gtgccctgac ccagggcctc agcatggcct acaagtattg
     1741 aggctccctc ctggtgctga ggcccagccc tgggctccaa cccttgcctc ttctgcaggg
     1801 atcacccatc attctgaggt ccccaaccca agggtcacat atagtgctgc tgctttcact
     1861 gctgcaccaa tgcccttggc tggcctgagc agcctatgca atgtgcttgc tgagggtaga
     1921 agccctaacc ctccaggagc gtggcttcag cagcctggac acccaccttg ctctgtgctg
     1981 ctaggttgtg gccacagcta agattataaa acctcatttt ccagagttgc tagtacttga
     2041 tttttttgat aataaatgaa cgattggagt tgaaa
//
