LOCUS       XM_030255327            2229 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus zyxin (Zyx), transcript variant X3, mRNA.
ACCESSION   XM_030255327
VERSION     XM_030255327.2
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000072.7) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_030255327.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2229
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="6"
     gene            1..2229
                     /gene="Zyx"
                     /gene_synonym="9530098H06Rik"
                     /note="zyxin; Derived by automated computational analysis
                     using gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 20 mRNAs, 34 ESTs, 824 long SRA
                     reads, 2 Proteins, and 100% coverage of the annotated
                     genomic feature by RNAseq alignments, including 40 samples
                     with support for all annotated introns"
                     /db_xref="GeneID:22793"
                     /db_xref="MGI:MGI:103072"
     CDS             146..1747
                     /gene="Zyx"
                     /gene_synonym="9530098H06Rik"
                     /codon_start=1
                     /product="zyxin isoform X2"
                     /protein_id="XP_030111187.1"
                     /db_xref="GeneID:22793"
                     /db_xref="MGI:MGI:103072"
                     /translation="MAAPRPPPAISVSVSAPAFYAPQKKFAPVVAPKPKVNPFRPGDS
                     EPPVAAGAQRAQMGRVGEIPPPPPEDFPLPPPPLIGEGDDSEGALGGAFPPPPPPMIE
                     EPFPPAPLEEDIFPSPPPPLEEEGGPEAPTQLPPQVSSGYVPPPVATPFVPKPSTKPA
                     PGGTAPLPPWKTPSSSQPPPQPQAKPQVQLHVQPQAKPHVQPQPVSSANTQPRGPLSQ
                     APTPAPKFAPVAPKFTPVVSKFSPGAPSGPGPQPNQKMVPPDAPSSVSTGSPQPPSFT
                     YAQQKEKPLVQEKQHPQPPPAQNQNQVRSPGGPGPLTLKEVEELEQLTQQLMQDMEHP
                     QRQSVAVNESCGKCNQPLARAQPAVRALGQLFHITCFTCHQCQQQLQGQQFYSLEGAP
                     YCEGCYTDTLEKCNTCGQPITDRMLRATGKAYHPQCFTCVVCACPLEGTSFIVDQANQ
                     PHCVPDYHKQYAPRCSVCSEPIMPEPGRDETVRVVALDKNFHMKCYKCEDCGKPLSIE
                     ADDNGCFPLDGHVLCRKCHSARAQT"
ORIGIN      
        1 cacgtgggac gcggagctga agctgcaggg aggggcgggg tcggtcaatg gcaggcaggc
       61 ccggggtgcg cgactgagct gcttcaggac cgctgggatt actagccagc ctgctcagcc
      121 tggagtgcgg acacccggcc tggccatggc ggccccccgc ccgcctcccg cgatctccgt
      181 ctccgtctcg gcccccgcgt tttacgcccc gcagaagaag ttcgccccgg ttgtggcccc
      241 aaagcccaaa gtgaatcctt tccggcctgg ggacagcgag cctcctgtag cagccggggc
      301 ccaaagagcg cagatgggtc gggtgggcga gatcccacca ccacccccgg aagactttcc
      361 tttgccccct cctcccctta ttggggaggg cgacgactca gagggtgccc tgggaggtgc
      421 cttcccacct ccacctcccc cgatgatcga ggaaccattc ccccctgctc ctctggagga
      481 ggacatcttc ccctcccctc cacctccact ggaggaggag ggagggcctg aggcccctac
      541 ccagctccca ccgcaggtat catccggata tgtaccccca ccagttgcca ctccatttgt
      601 tcccaagcct agtaccaaac ctgcccctgg gggcacagca cccttgcctc cttggaagac
      661 cccttctagc tcccagccac cacctcagcc gcaggccaag cctcaggtcc agctccatgt
      721 ccagcctcag gccaagcccc atgtccaacc ccagcctgtg tcttctgcta atacacagcc
      781 ccggggtccc ctttctcagg caccaactcc agcacctaag tttgctccag tggctcctaa
      841 atttactccc gtggtttcca agttcagccc tggtgctcca agtggacctg ggccacagcc
      901 caatcaaaaa atggtgcctc cggatgctcc ttcttctgtg agcacaggct cccctcagcc
      961 ccctagcttc acctatgctc agcagaagga gaagccccta gttcaagaga agcagcaccc
     1021 acagcctcca ccagctcaaa accaaaacca ggtacgctct cctggaggcc caggcccctt
     1081 gaccctgaag gaggtagagg agttggagca gctgacccag cagctgatgc aggacatgga
     1141 acaccctcag aggcagagcg tggcagtgaa tgagtcctgt ggcaaatgca atcagccact
     1201 ggcccgtgca cagcctgcgg ttcgtgcact gggacaactg ttccacatca cctgcttcac
     1261 ttgccatcag tgtcagcagc agctgcaggg acagcagttc tatagcctgg agggagcacc
     1321 atattgtgag ggctgctaca ccgacacttt ggagaagtgc aacacctgtg ggcagcccat
     1381 cactgaccgc atgctgaggg ccactggcaa agcctaccac ccacagtgct tcacctgtgt
     1441 ggtctgcgcc tgtcccctgg agggcacctc cttcattgtg gaccaggcca atcagcccca
     1501 ctgtgtccct gactatcaca agcaatacgc tccaaggtgc tccgtctgct cggagccaat
     1561 catgcctgag cctggccgag acgagactgt gcgagtagtg gcgctggata agaactttca
     1621 tatgaagtgt tacaagtgtg aggactgtgg gaaacctctg tccattgagg cagatgacaa
     1681 cggctgtttc cctctggatg gccacgtcct ttgtcggaag tgccactccg ctagagccca
     1741 gacctgagtt gagatggacc tccttccaga ccacaggtcc gtcccccacc gtggaccacc
     1801 cacactgagg ccagtccttg cctctaccct ccctgcattc caatcccctc ccgagtctca
     1861 agtgccctga cccagggcct cagcatggcc tacaagtatt gaggctccct cctggtgctg
     1921 aggcccagcc ctgggctcca acccttgcct cttctgcagg gatcacccat cattctgagg
     1981 tccccaaccc aagggtcaca tatagtgctg ctgctttcac tgctgcacca atgcccttgg
     2041 ctggcctgag cagcctatgc aatgtgcttg ctgagggtag aagccctaac cctccaggag
     2101 cgtggcttca gcagcctgga cacccacctt gctctgtgct gctaggttgt ggccacagct
     2161 aagattataa aacctcattt tccagagttg ctagtacttg atttttttga taataaatga
     2221 acgattgga
//
