LOCUS       NM_001081473            5619 bp    mRNA    linear   ROD 12-JUN-2024
DEFINITION  Mus musculus zinc finger, X-linked, duplicated B (Zxdb), mRNA.
ACCESSION   NM_001081473 XR_002151
VERSION     NM_001081473.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 5619)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 5619)
  AUTHORS   Diez-Roux,G., Banfi,S., Sultan,M., Geffers,L., Anand,S., Rozado,D.,
            Magen,A., Canidio,E., Pagani,M., Peluso,I., Lin-Marq,N., Koch,M.,
            Bilio,M., Cantiello,I., Verde,R., De Masi,C., Bianchi,S.A.,
            Cicchini,J., Perroud,E., Mehmeti,S., Dagand,E., Schrinner,S.,
            Nurnberger,A., Schmidt,K., Metz,K., Zwingmann,C., Brieske,N.,
            Springer,C., Hernandez,A.M., Herzog,S., Grabbe,F., Sieverding,C.,
            Fischer,B., Schrader,K., Brockmeyer,M., Dettmer,S., Helbig,C.,
            Alunni,V., Battaini,M.A., Mura,C., Henrichsen,C.N.,
            Garcia-Lopez,R., Echevarria,D., Puelles,E., Garcia-Calero,E.,
            Kruse,S., Uhr,M., Kauck,C., Feng,G., Milyaev,N., Ong,C.K.,
            Kumar,L., Lam,M., Semple,C.A., Gyenesei,A., Mundlos,S., Radelof,U.,
            Lehrach,H., Sarmientos,P., Reymond,A., Davidson,D.R., Dolle,P.,
            Antonarakis,S.E., Yaspo,M.L., Martinez,S., Baldock,R.A., Eichele,G.
            and Ballabio,A.
  TITLE     A high-resolution anatomical atlas of the transcriptome in the
            mouse embryo
  JOURNAL   PLoS Biol 9 (1), e1000582 (2011)
   PUBMED   21267068
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 5619)
  AUTHORS   McMahon,A.P., Aronow,B.J., Davidson,D.R., Davies,J.A., Gaido,K.W.,
            Grimmond,S., Lessard,J.L., Little,M.H., Potter,S.S., Wilder,E.L.
            and Zhang,P.
  CONSRTM   GUDMAP project
  TITLE     GUDMAP: the genitourinary developmental molecular anatomy project
  JOURNAL   J Am Soc Nephrol 19 (4), 667-671 (2008)
   PUBMED   18287559
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CR293526.28.
            
            On Mar 8, 2022 this sequence version replaced NM_001081473.1.
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-5619              CR293526.28        17877-23495
FEATURES             Location/Qualifiers
     source          1..5619
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="X"
                     /map="X 41.68 cM"
     gene            1..5619
                     /gene="Zxdb"
                     /gene_synonym="Zxda"
                     /note="zinc finger, X-linked, duplicated B"
                     /db_xref="GeneID:668166"
                     /db_xref="MGI:MGI:3694898"
     exon            1..5619
                     /gene="Zxdb"
                     /gene_synonym="Zxda"
                     /inference="alignment:Splign:2.1.0"
     CDS             107..2728
                     /gene="Zxdb"
                     /gene_synonym="Zxda"
                     /note="zinc finger X-linked protein ZXDA/ZXDB"
                     /codon_start=1
                     /product="zinc finger X-linked protein ZXDB"
                     /protein_id="NP_001074942.1"
                     /db_xref="CCDS:CCDS41065.1"
                     /db_xref="GeneID:668166"
                     /db_xref="MGI:MGI:3694898"
                     /translation="MEIPRLLPARGTPQGAGGGGCPAGGGGVHRAPASLACQAPTRRL
                     LLLRGAQDGGPGPRSAEAQRASRGLGPSLNRLAPRPDHRSSGGGRGGGAGGGGGGSGG
                     GGGGGGGGGGGGGGGGSRGGSDDFFLLLLDPVGGDVETVGTEQAGAPVRREEAGAGPR
                     PERRQSAGPPAGRPEPGPRCLSAVPAASPLPAAGPGPAAAAAAAAAAAFAGTITIHNQ
                     DLLLRFENGVLTLTTPPLPAWEPGVAPFPQPQPPPQPGALIAPQAAAAGFPPAAAAAA
                     AAAAAGAQLGDCPELPPDLLLAEPAEPAACPAPPEEEAEAPAAAAAQSPRGPAGPGPG
                     PGVVLYLCPEAQCGQTFAKKHQLKVHLLTHSSSQGQRPFKCPLSGCGWTFTTSYKLKR
                     HLQSHDKLRPFGCPVQGCGKSFTTVYNLKAHMKGHEQENSFKCEVCEESFPTQAKLST
                     HQRSHFEPERPYQCAFSGCKKTFITVSALFSHNRAHFREQELFACSFPGCSKQYDKAC
                     RLKIHLRSHTGERPFLCDFDGCGWNFTSMSKLLRHKRKHEDDRRFTCPVEGCGKSFTR
                     AEHLKGHSITHLGTKPFVCPVEGCCARFSARSSLYIHSKKHLQDVGAWKSRCPVPTCN
                     KLFTSKHSMKTHMTKRHNLSQDLLAQLEAANSLTPSSELTSPGQSDLSGAELVSLFSD
                     VPGHGSAAVLDTALVNSGILTIDVASVNSSLAGSLPADNNSNNHSLGQAAEPRALRGA
                     PSDLPQSLDTSLFFGTSVAGYQHSPLDMDDVSAGNVGLFGSLALKNSSLEPQALTPSN
                     KLTVDTEALTPSSTLCENSVSELLTPAKAEWNVHPESDFFGHEEETQFGFSHPTGSHG
                     SQKDTDLITVTGTPFLV"
     regulatory      3133..3138
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zxdb"
                     /gene_synonym="Zxda"
                     /note="hexamer: ATTAAA"
     polyA_site      3153
                     /gene="Zxdb"
                     /gene_synonym="Zxda"
                     /note="major polyA site"
     regulatory      5594..5599
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zxdb"
                     /gene_synonym="Zxda"
                     /note="hexamer: AGTAAA"
     regulatory      5602..5607
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zxdb"
                     /gene_synonym="Zxda"
                     /note="hexamer: TATAAA"
     polyA_site      5613
                     /gene="Zxdb"
                     /gene_synonym="Zxda"
                     /note="major polyA site"
     polyA_site      5619
                     /gene="Zxdb"
                     /gene_synonym="Zxda"
                     /note="major polyA site"
ORIGIN      
        1 gcattgcact ttttttcctt tcaggaacgt gttcgggccc gcggcagggg gcggggtcgc
       61 gcctccgcct cggctctggt tccagccgag cctcaccgac gccgagatgg aaatcccgag
      121 gctgctcccg gctcgcggga caccgcaggg cgccggtggc ggcggctgcc cggcgggtgg
      181 cggcggggtg caccgagccc cggcctctct ggcttgtcag gcccccacgc gccgcctcct
      241 actgctccgg ggggcccaag atggcgggcc ggggccgcgg agcgcagagg cccagagggc
      301 ctcccggggc ctgggcccga gcctgaaccg gttggcgccg aggcccgatc accggagcag
      361 cggcggcggc agaggcggcg gcgctggcgg aggaggagga ggcagcggcg gcggcggtgg
      421 cggcggcggc ggcggcggcg gcggcggcgg cggcggcggc agcagaggcg gcagcgacga
      481 cttcttcctg ttgctgcttg acccggtggg tggcgatgta gaaaccgtgg gcacggagca
      541 ggccggagcg cccgtgcgga gggaggaggc cggggcaggc ccgaggcccg agcggcgcca
      601 gagcgccggg cccccagcgg gccgtcccga gccgggtccc cgctgtctgt ctgcggtccc
      661 ggccgcgtcc ccgcttcccg cggccggccc gggcccagcg gcggcggcgg cggcggcggc
      721 ggcggcggcc ttcgcgggca ccatcaccat ccacaaccag gacttgctgc tgcgcttcga
      781 gaacggcgtc ctcaccctga ccacgccccc gctgcccgcc tgggagccgg gggtcgcgcc
      841 gttcccgcag cctcagccgc cgccgcagcc gggggcgctg atcgccccgc aggccgccgc
      901 cgccgggttt ccgcccgccg ctgccgccgc cgccgccgcc gccgccgccg gggcgcagct
      961 gggcgactgc cccgagctgc cgccggacct cctgctggcg gagccggcgg aacccgcggc
     1021 ctgcccggcg cccccggagg aggaggccga ggccccggcc gccgccgccg cgcagagccc
     1081 ccgcgggccc gcgggcccgg gcccgggccc gggcgtggtg ctgtacctgt gcccggaggc
     1141 gcagtgcggc cagaccttcg ccaagaagca ccagctgaag gtgcacctgc tgacgcacag
     1201 cagcagccag ggccagcggc ccttcaagtg cccgctcagc ggctgcggct ggaccttcac
     1261 cacctcctac aagctcaagc ggcacctgca gtcgcacgac aagctgcggc cattcggctg
     1321 cccggtgcag ggctgcggca agagcttcac caccgtctac aacctcaagg cgcacatgaa
     1381 ggggcacgag caggagaact ccttcaaatg cgaggtgtgc gaggagagct tccccacgca
     1441 ggccaagctc agcacccacc agcgcagcca cttcgagccc gagaggccct accagtgcgc
     1501 gttttcgggc tgcaagaaga ccttcatcac ggtgagcgcc ctgttctcgc acaaccgcgc
     1561 ccatttcagg gaacaggaac tcttcgcctg ctccttccct ggctgcagca agcagtacga
     1621 caaggcctgc aggctcaaga tccacctgcg cagccacacc ggggagagac ccttcctgtg
     1681 tgacttcgac ggctgcggct ggaacttcac cagcatgtcc aagctcttaa ggcacaagcg
     1741 gaagcacgag gacgaccgca ggttcacctg tcccgtcgag ggctgcggca agtccttcac
     1801 cagggccgag cacctgaaag gccacagcat aacccacctg ggcaccaagc ccttcgtgtg
     1861 ccccgtggag ggctgctgtg cccgcttctc ggctcgcagc agcctctaca tccactccaa
     1921 gaagcacttg caggacgtgg gtgcgtggaa gagccgctgc ccggtcccca cctgtaacaa
     1981 gctcttcacg tccaagcaca gcatgaagac ccacatgacc aaaaggcaca acctcagcca
     2041 ggacctcctg gcccagctag aagctgccaa ctctctcacg cccagcagtg agctcaccag
     2101 cccggggcag agcgatctca gtggggccga gctcgtgtct ctgttctcgg atgtgcctgg
     2161 ccacggttcc gccgcggtgc tggacacggc cttggtcaac tctggcatct tgactattga
     2221 tgtggcctct gtgaactcga gcctcgcggg aagtctccct gcggataata acagcaacaa
     2281 ccattccttg gggcaagcgg ccgagcctcg ggccttgagg ggggccccca gtgacctccc
     2341 ccagagtctg gatacctctc tcttcttcgg aacctcggtg gctggctacc agcacagccc
     2401 cttggacatg gacgatgtct ccgccgggaa cgtggggctc tttggctcct tggccctgaa
     2461 aaactcaagc ctggagccgc aggctttgac acccagcaat aagttgactg tggacacgga
     2521 agctctgacc ccctccagca ccctctgtga aaacagtgtc tccgagctac tgaccccagc
     2581 caaagccgag tggaacgtgc accccgaatc tgacttcttt ggacacgagg aagaaaccca
     2641 gttcggattc tcccacccaa caggaagcca tgggtctcag aaagacacag atcttatcac
     2701 ggtgactggc accccgtttt tggtatgaac cgactctgcc tgttccctgc ctgccctgtg
     2761 gctcactttg ttgttgttgt tgatgttgtt gtttttatca cactcaaatg tgagaatgtt
     2821 ctggaaggag cgcttgcttg cctgcagttg tttcttgctg ccttgcaaag gaacgcatct
     2881 gtggattacc aatttaggga tttcagttct catcttgagt ctgggactga taagttctct
     2941 gactgtgagc aagtctctta accgagctga gccttaattt tttcttttta cttataaagg
     3001 acatggttta ggttagattg cttttgtcat cttttcagct ttctggagtc tgtattattg
     3061 gtttattttt ccttcatttt tattgggggc accccaaaca atgatatgtt cttcttttgt
     3121 atataaactt aaattaaact atataataat gaatatatac tttgcacttg ccttcatcag
     3181 tttaaatcca caagccatct tagttgtctt tattgtcctc ccttatttag tgttattttt
     3241 aaaggtgtac ccgatattag cttattcata aatatttagt acatatcttt acattgagtc
     3301 ctcttgaaac agtttatttt aacaatttgt ttatatcagt taaatttcat gttttaaact
     3361 ttatattgtt acaaaatggt aactggttta gtattcaatg ttttgcaata tattttaatc
     3421 tatgttccat ttccgtgttt ttcttaagaa tttattcatt gaaaataatt actatgcatg
     3481 tagaatctgc cacattcctt ccaaattttg ctgattgtgt ccttatgttc acttgatttc
     3541 tttaatttcg ttgttaatgt cttggtcaaa cttaaatatt acttttgcat tcatgttcta
     3601 tagcattccc tatcttcgtt tattaactta gaacatctgg ctttctgttt ttgtgatgct
     3661 aagagccttc actgatcagt acatttgttt gtggttactt tttcctctgc tatatggaat
     3721 tgttctccta caatcactaa cacttagggg aggaggagat gtttacagca ctccagcaag
     3781 tttaatataa atatcattca gtgccagaat gttttcttaa atgatgttaa aactaacaag
     3841 acaaaatagg aaagagaact gtgtttgctg ttgttattgt tgacatttct gacatccttt
     3901 gctggtgtta gggaggctgt attgtagaat tgccattcag gactttgata tgagagaaac
     3961 tcagggtcca gtttgtgctc tgtggtgttg gagaggttgt gttaaacata ctcatctcac
     4021 taaacctcag tttcctgttt actgattaat gtgtgtgcac acgactaaca ttccttagac
     4081 ttttttttct catacaattt tcaacacata agtaaaagta tatatttcag cacattttaa
     4141 tgatttcata tgctattttt acatactcag ttttcttgtt gttagggaaa aataaggata
     4201 attcagccat attggtattc agtcaataaa gtgttgtgag tttatagtga aacaggaaag
     4261 ggtctcttta ttccttaccc taaataattt tctctccaat tgtgagaaaa atcagaagtg
     4321 ggaacactgt tcatgtgctt atctacataa ctctccattt gatcagtctg tcagcatcct
     4381 tgttctgttt cgaacatcgg ccttctttct ctgtgactgt ggagtctttg attctttcaa
     4441 aatatgataa aggtgcagag ggcgatgata tcctttgtga tctgaagaaa acattgttta
     4501 tggttttcca gaactgaaag aaattgaaag attgaatgtc aatattgtgt aaactcttgt
     4561 acagagagta tatcattttt agtttgttga atgttttcat aactcacatc ttttattttt
     4621 gttcagagca accctgtgag gtagttttag cgaatctgtg catgtttcat attatagttt
     4681 agccagctca cattccagct ggttttgact atgagtgaca actctatata tagcttcaca
     4741 aaagaagaag ataatttttt cacctctcct gtctgcaact tttaaggttc attctcttct
     4801 atcataactg gttgctttgt tccagcgtag ttggtttctg ttagcctctg cttactattt
     4861 ctacagtcca gttcctggcc tatgcattcc agtccttgta tacctttcat tttctgtttg
     4921 cttaatggct agatattttt cctgtgacta tcccttcaac attttttctc atggcacatt
     4981 ttcttccagt gctagcattt actgagcata tactatagct ctgtgtgtac agtgagaagc
     5041 tattttctga gcttaaataa tactgtatgt atatatgatt caaggcataa attagattat
     5101 tttttatgct gttcagttga gaagtgactt tgtgtttctt tatttctatt tacaaaggtt
     5161 ttgcagggag ttctgctaat actttcttat ttgttctagt gttctagtcc agtagcattt
     5221 gcatgtagat gtctatggat gacaaacttt ggaaatgcac taaaaatttg ccactatgaa
     5281 atctttcttt gttgtatgta tgttggtatt tatacacacc cacagatact cgcaaatatt
     5341 ttaaaaatgg ttgtactcat ttagtgaaaa tgaaaagtag acatactttt ataaatcaga
     5401 gaaatgctta gaattttatt ttgtctactc atttgacagt tttccatgtt tgtgttgaaa
     5461 ctatttgtat tcataagata tatttcaaaa gtgttattca tttgaaagtt cctaaataga
     5521 ccactatttt tttgtgtgtg tttggcaaat aagtctgtca aggatgagct aaatacacaa
     5581 gtcatacaaa taaagtaaat ttataaacgt taagataaa
//
