LOCUS       NM_001293683            1851 bp    mRNA    linear   ROD 15-DEC-2024
DEFINITION  Mus musculus ZW10 interactor (Zwint), transcript variant 2, mRNA.
ACCESSION   NM_001293683 XM_006513884
VERSION     NM_001293683.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1851)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 1851)
  AUTHORS   Bedogni,F. and Hevner,R.F.
  TITLE     Cell-Type-Specific Gene Expression in Developing Mouse Neocortex:
            Intermediate Progenitors Implicated in Axon Development
  JOURNAL   Front Mol Neurosci 14, 686034 (2021)
   PUBMED   34321999
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 1851)
  AUTHORS   Ye,A., Kim,H. and Kim,J.
  TITLE     PEG3 control on the mammalian MSL complex
  JOURNAL   PLoS One 12 (6), e0178363 (2017)
   PUBMED   28609438
  REMARK    Publication Status: Online-Only
REFERENCE   4  (bases 1 to 1851)
  AUTHORS   Woo Seo,D., Yeop You,S., Chung,W.J., Cho,D.H., Kim,J.S. and Su
            Oh,J.
  TITLE     Zwint-1 is required for spindle assembly checkpoint function and
            kinetochore-microtubule attachment during oocyte meiosis
  JOURNAL   Sci Rep 5, 15431 (2015)
   PUBMED   26486467
  REMARK    Publication Status: Online-Only
REFERENCE   5  (bases 1 to 1851)
  AUTHORS   Gentil,B.J., McLean,J.R., Xiao,S., Zhao,B., Durham,H.D. and
            Robertson,J.
  TITLE     A two-hybrid screen identifies an unconventional role for the
            intermediate filament peripherin in regulating the subcellular
            distribution of the SNAP25-interacting protein, SIP30
  JOURNAL   J Neurochem 131 (5), 588-601 (2014)
   PUBMED   25113441
REFERENCE   6  (bases 1 to 1851)
  AUTHORS   Bochkis,I.M., Schug,J., Ye,D.Z., Kurinna,S., Stratton,S.A.,
            Barton,M.C. and Kaestner,K.H.
  TITLE     Genome-wide location analysis reveals distinct transcriptional
            circuitry by paralogous regulators Foxa1 and Foxa2
  JOURNAL   PLoS Genet 8 (6), e1002770 (2012)
   PUBMED   22737085
REFERENCE   7  (bases 1 to 1851)
  AUTHORS   Lampert,F. and Westermann,S.
  TITLE     A blueprint for kinetochores - new insights into the molecular
            mechanics of cell division
  JOURNAL   Nat Rev Mol Cell Biol 12 (7), 407-412 (2011)
   PUBMED   21633384
  REMARK    Publication Status: Online-Only
REFERENCE   8  (bases 1 to 1851)
  AUTHORS   Schilling,K. and Oberdick,J.
  TITLE     The treasury of the commons: making use of public gene expression
            resources to better characterize the molecular diversity of
            inhibitory interneurons in the cerebellar cortex
  JOURNAL   Cerebellum 8 (4), 477-489 (2009)
   PUBMED   19554387
REFERENCE   9  (bases 1 to 1851)
  AUTHORS   Ling,K.H., Hewitt,C.A., Beissbarth,T., Hyde,L., Banerjee,K.,
            Cheah,P.S., Cannon,P.Z., Hahn,C.N., Thomas,P.Q., Smyth,G.K.,
            Tan,S.S., Thomas,T. and Scott,H.S.
  TITLE     Molecular networks involved in mouse cerebral corticogenesis and
            spatio-temporal regulation of Sox4 and Sox11 novel antisense
            transcripts revealed by transcriptome profiling
  JOURNAL   Genome Biol 10 (10), R104 (2009)
   PUBMED   19799774
REFERENCE   10 (bases 1 to 1851)
  AUTHORS   van Vlijmen,T., Vleugel,M., Evers,M., Mohammed,S., Wulf,P.S.,
            Heck,A.J., Hoogenraad,C.C. and van der Sluijs,P.
  TITLE     A unique residue in rab3c determines the interaction with novel
            binding protein Zwint-1
  JOURNAL   FEBS Lett 582 (19), 2838-2842 (2008)
   PUBMED   18625232
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY240779.1, AK075977.1 and BC034870.1.
            
            On Jun 13, 2014 this sequence version replaced XM_006513884.1.
            
            Transcript Variant: This variant (2) differs in the 3' UTR,
            compared to variant 1. Variants 1, 2, and 3 encode the same
            protein.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC027100.1, SRR1660813.103503.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-55                BY240779.1         2-56
            56-1824             AK075977.1         2-1770
            1825-1851           BC034870.1         1754-1780
FEATURES             Location/Qualifiers
     source          1..1851
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="10"
                     /map="10 37.15 cM"
     gene            1..1851
                     /gene="Zwint"
                     /gene_synonym="2010007E07Rik; 2600001N01Rik; D10Ertd749e;
                     Zwint-1"
                     /note="ZW10 interactor"
                     /db_xref="GeneID:52696"
                     /db_xref="MGI:MGI:1289227"
     exon            1..132
                     /gene="Zwint"
                     /gene_synonym="2010007E07Rik; 2600001N01Rik; D10Ertd749e;
                     Zwint-1"
                     /inference="alignment:Splign:2.1.0"
     exon            133..223
                     /gene="Zwint"
                     /gene_synonym="2010007E07Rik; 2600001N01Rik; D10Ertd749e;
                     Zwint-1"
                     /inference="alignment:Splign:2.1.0"
     exon            224..347
                     /gene="Zwint"
                     /gene_synonym="2010007E07Rik; 2600001N01Rik; D10Ertd749e;
                     Zwint-1"
                     /inference="alignment:Splign:2.1.0"
     exon            348..514
                     /gene="Zwint"
                     /gene_synonym="2010007E07Rik; 2600001N01Rik; D10Ertd749e;
                     Zwint-1"
                     /inference="alignment:Splign:2.1.0"
     exon            515..571
                     /gene="Zwint"
                     /gene_synonym="2010007E07Rik; 2600001N01Rik; D10Ertd749e;
                     Zwint-1"
                     /inference="alignment:Splign:2.1.0"
     exon            572..711
                     /gene="Zwint"
                     /gene_synonym="2010007E07Rik; 2600001N01Rik; D10Ertd749e;
                     Zwint-1"
                     /inference="alignment:Splign:2.1.0"
     exon            712..834
                     /gene="Zwint"
                     /gene_synonym="2010007E07Rik; 2600001N01Rik; D10Ertd749e;
                     Zwint-1"
                     /inference="alignment:Splign:2.1.0"
     exon            835..1833
                     /gene="Zwint"
                     /gene_synonym="2010007E07Rik; 2600001N01Rik; D10Ertd749e;
                     Zwint-1"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1810..1815
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zwint"
                     /gene_synonym="2010007E07Rik; 2600001N01Rik; D10Ertd749e;
                     Zwint-1"
                     /note="hexamer: AATAAA"
     polyA_site      1833
                     /gene="Zwint"
                     /gene_synonym="2010007E07Rik; 2600001N01Rik; D10Ertd749e;
                     Zwint-1"
                     /note="major polyA site"
ORIGIN      
        1 acttacccag aaaccaatct cgacctaggc gggcagtcca ggagaatcca aaggcgtggt
       61 gagcgacaga acgatggcgg acgcggagaa aaacgctgtt gcggagaaaa acaacgctgt
      121 tgcgacgaaa gaggttctgg ctgaggcagc agccattcta gaacctgtag gcttgcagga
      181 agaagcagag ctgcctgcca agatcatgga ggagtttatg aggaactcgc ggaagaaaga
      241 caaactgctc tgtagccagc ttcaagtagt gaacttctta cagacttttc tggctcagga
      301 ggacactgag cagagccctg atgctctggc ttctgaagat gccagtcggc aaaaggcaac
      361 tgaaactaag gagcagtgga aggacatgaa ggccacatac atggatcacg tggatgtcat
      421 aaaatgtgcc ctgtctgagg ccttacccca ggttaaagag gctcacagga agtacacaga
      481 gcttcagaag gcttttgagc aactcgaggc taagaagcga gtccttgagg agaaacttca
      541 gctggctcag aagcagtggg tactgcaaca gaagcgtttg cagaacctga caaagatttc
      601 tgcagaggtc aagaggcgcc ggaagagggc tctggagaag cttgacggat cccatcagga
      661 actggaaacc ttgaagcagc aagcggggca ggaacaggag aagctgcaga ggaaccagag
      721 ctacctccag ctgctgtgtt cgctgcagaa taagctggtc atctctgagg gcaaggctga
      781 ggacaaagat gtgaaagggc gagcccttac agccaaatcc aaatctcctt aaagatgaaa
      841 ggatgagaag agagccgtat tcataccctg cttgggctga gaccagattg gttccttcac
      901 tgttgtatct ctaggcctaa gcctggaagt ttgttgcctc tgtacaatct aattctccaa
      961 gctgattcaa tctggcatct cttggctttt cagtgaactg ttgtgttttg tctcatgcta
     1021 actttgacag tatattctgg cttgttctgt cttcacctgt gtctaacttg ctgtccttgc
     1081 aacctgtctc tgtaaaagtg taccagtgaa actcacacgc atgcatgcac gcacacaggc
     1141 acgcatgcca caaccaccct tttctctcgc tgatcttcag tagtctctcc tcttgtcctc
     1201 tctttttctt tgtcttctct ccctaccaga tgtgaaagca actttatgcg cctgctgtaa
     1261 ttgttgtctg aggattactg cgagtaagct caccctttgt agttactaaa ctggccggct
     1321 ggctgggtca gctccgctgt actggttcat aacccggctt caagttgact gattcaaagg
     1381 ggcctctctt ggcttctgac tgaactgctc tgcttggaaa gtctgatgga cttcaggaac
     1441 agaactgtac tgactgccct gactcagctg aactcaacta caccaaattc attggttctc
     1501 tctgctgtac tgctcttagg tagcctctct cctgtgctgt cctcctgagt cgtgctgtca
     1561 aatctctctc tgattcatca ctttgcccct caattagact ggcagtttca aacacggcac
     1621 ttaacatttc agttgtagtc acttgatact gcattccgaa cttgagtcta ttgaatccag
     1681 aatgtgaatc catgcctttg tgactgtgac ctcactctct tcagtattgt gtaaaagttt
     1741 taggaactct ccaagtaaat acttggtaat tgctcattga tagaacagaa aaatgctgtg
     1801 tagataataa ataaacatat aactataaga ttaaaaaaaa aaaaaaaaaa a
//
