LOCUS       NM_027198                776 bp    mRNA    linear   ROD 03-JUN-2024
DEFINITION  Mus musculus zinc finger SWIM-type containing 7 (Zswim7), mRNA.
ACCESSION   NM_027198 XM_001473892 XM_126343
VERSION     NM_027198.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 776)
  AUTHORS   Prakash,R., Sandoval,T., Morati,F., Zagelbaum,J.A., Lim,P.X.,
            White,T., Taylor,B., Wang,R., Desclos,E.C.B., Sullivan,M.R.,
            Rein,H.L., Bernstein,K.A., Krawczyk,P.M., Gautier,J., Modesti,M.,
            Vanoli,F. and Jasin,M.
  TITLE     Distinct pathways of homologous recombination controlled by the
            SWS1-SWSAP1-SPIDR complex
  JOURNAL   Nat Commun 12 (1), 4255 (2021)
   PUBMED   34253720
  REMARK    GeneRIF: Distinct pathways of homologous recombination controlled
            by the SWS1-SWSAP1-SPIDR complex.
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 776)
  AUTHORS   Abreu,C.M., Prakash,R., Romanienko,P.J., Roig,I., Keeney,S. and
            Jasin,M.
  TITLE     Shu complex SWS1-SWSAP1 promotes early steps in mouse meiotic
            recombination
  JOURNAL   Nat Commun 9 (1), 3961 (2018)
   PUBMED   30305635
  REMARK    GeneRIF: These results demonstrate an essential role for
            SWS1-SWSAP1 in meiotic progression and emphasize the complex
            interplay of factors that ensure recombinase function.
            Publication Status: Online-Only
REFERENCE   3  (bases 1 to 776)
  AUTHORS   VanBuren,V., Piao,Y., Dudekula,D.B., Qian,Y., Carter,M.G.,
            Martin,P.R., Stagg,C.A., Bassey,U.C., Aiba,K., Hamatani,T.,
            Kargul,G.J., Luo,A.G., Kelso,J., Hide,W. and Ko,M.S.
  TITLE     Assembly, verification, and initial annotation of the NIA mouse
            7.4K cDNA clone set
  JOURNAL   Genome Res 12 (12), 1999-2003 (2002)
   PUBMED   12466305
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BQ554850.1, AK010472.1 and AA027411.1.
            
            On or before Jul 23, 2009 this sequence version replaced
            XM_001473892.1, XM_126343.5.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK010472.1, BQ554850.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164139, SAMN01164142
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-20                BQ554850.1         4-23
            21-746              AK010472.1         1-726
            747-776             AA027411.1         339-368
FEATURES             Location/Qualifiers
     source          1..776
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="11"
                     /map="11 37.99 cM"
     gene            1..776
                     /gene="Zswim7"
                     /gene_synonym="2410012H22Rik; SWS1"
                     /note="zinc finger SWIM-type containing 7"
                     /db_xref="GeneID:69747"
                     /db_xref="MGI:MGI:1916997"
     exon            1..139
                     /gene="Zswim7"
                     /gene_synonym="2410012H22Rik; SWS1"
                     /inference="alignment:Splign:2.1.0"
     exon            140..161
                     /gene="Zswim7"
                     /gene_synonym="2410012H22Rik; SWS1"
                     /inference="alignment:Splign:2.1.0"
     exon            162..264
                     /gene="Zswim7"
                     /gene_synonym="2410012H22Rik; SWS1"
                     /inference="alignment:Splign:2.1.0"
     exon            265..369
                     /gene="Zswim7"
                     /gene_synonym="2410012H22Rik; SWS1"
                     /inference="alignment:Splign:2.1.0"
     exon            370..752
                     /gene="Zswim7"
                     /gene_synonym="2410012H22Rik; SWS1"
                     /inference="alignment:Splign:2.1.0"
     regulatory      723..728
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zswim7"
                     /gene_synonym="2410012H22Rik; SWS1"
                     /note="hexamer: AATAAA"
     polyA_site      752
                     /gene="Zswim7"
                     /gene_synonym="2410012H22Rik; SWS1"
                     /note="major polyA site"
ORIGIN      
        1 ccccggcctg cagggcgcgt gaagttcgca gcgcccggga ggagagaaga cgggcggcgt
       61 gccatggcgg tcgcgctccc ggaggtggtg gaagagctcc tgagcgagat ggccgccgct
      121 gtgcgagaca gcgcgagaat tcccgacgag cttctcttat cgctggagtt tgtgtttggg
      181 tcatcggcca tccaggcctt ggacctagtc gatcgagagt ccgtcacttt aatctcatca
      241 cccagtggaa ggcgtgttta ccaggtgcta gggagttctg gcaaaacata tacatgtctg
      301 gcttcctgtc attactgctc gtgcccagca ttctccttct cagtgttacg gaagagtgac
      361 agcctgctgt gtaagcatct tctggcaatt taccttagtc agcttctgag gaactgccag
      421 cagctccatg tgtctgacaa gcaactgaca gacctattga tggaggacac aagaaggata
      481 aaaggtgcgg ctggaacatg gacttcaaag acagaagcct agcaggaaac gcattcacat
      541 ctcacggtgc ccgaggtgga ggaatgggat gcacttccag acttgtgact gtcacttcac
      601 cctcacaggc taggctgcag agggtctgtg tggttaagag ccctctatgg tcttaatatt
      661 agccagcctc tgagccctgc aggtagaaat gtcccttggg agaattaagt attgttgact
      721 caaataaagc ctgagccatg ttgtatctgc aaaaaaaaaa aaaaaaaaaa aaaaaa
//
