LOCUS       NM_133204               1969 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus zinc finger and SCAN domain containing 5B (Zscan5b),
            mRNA.
ACCESSION   NM_133204 XM_982926
VERSION     NM_133204.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1969)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 1969)
  AUTHORS   Zhang,W., Zhang,R., Wu,L., Zhu,C., Zhang,C., Xu,C., Zhao,S.,
            Liu,X., Guo,T., Lu,Y., Gao,Z., Yu,X., Li,L., Chen,Z.J., Qin,Y. and
            Jiao,X.
  TITLE     NLRP14 deficiency causes female infertility with oocyte maturation
            defects and early embryonic arrest by impairing cytoplasmic UHRF1
            abundance
  JOURNAL   Cell Rep 42 (12), 113531 (2023)
   PUBMED   38060382
REFERENCE   3  (bases 1 to 1969)
  AUTHORS   Rong,Y., Ji,S.Y., Zhu,Y.Z., Wu,Y.W., Shen,L. and Fan,H.Y.
  TITLE     ZAR1 and ZAR2 are required for oocyte meiotic maturation by
            regulating the maternal transcriptome and mRNA translational
            activation
  JOURNAL   Nucleic Acids Res 47 (21), 11387-11402 (2019)
   PUBMED   31598710
REFERENCE   4  (bases 1 to 1969)
  AUTHORS   Ogawa,S., Yamada,M., Nakamura,A., Sugawara,T., Nakamura,A.,
            Miyajima,S., Harada,Y., Ooka,R., Okawa,R., Miyauchi,J., Tsumura,H.,
            Yoshimura,Y., Miyado,K., Akutsu,H., Tanaka,M., Umezawa,A. and
            Hamatani,T.
  TITLE     Zscan5b Deficiency Impairs DNA Damage Response and Causes
            Chromosomal Aberrations during Mitosis
  JOURNAL   Stem Cell Reports 12 (6), 1366-1379 (2019)
   PUBMED   31155506
  REMARK    GeneRIF: report demonstrates that the Zygotic genome activation
            gene Zscan5b is involved in genomic integrity and acts to promote
            DNA damage repair and regulate chromatin dynamics during mitosis.
REFERENCE   5  (bases 1 to 1969)
  AUTHORS   Guo,G., Huss,M., Tong,G.Q., Wang,C., Li Sun,L., Clarke,N.D. and
            Robson,P.
  TITLE     Resolution of cell fate decisions revealed by single-cell gene
            expression analysis from zygote to blastocyst
  JOURNAL   Dev Cell 18 (4), 675-685 (2010)
   PUBMED   20412781
REFERENCE   6  (bases 1 to 1969)
  AUTHORS   Sharov,A.A., Piao,Y., Matoba,R., Dudekula,D.B., Qian,Y.,
            VanBuren,V., Falco,G., Martin,P.R., Stagg,C.A., Bassey,U.C.,
            Wang,Y., Carter,M.G., Hamatani,T., Aiba,K., Akutsu,H., Sharova,L.,
            Tanaka,T.S., Kimber,W.L., Yoshikawa,T., Jaradat,S.A., Pantano,S.,
            Nagaraja,R., Boheler,K.R., Taub,D., Hodes,R.J., Longo,D.L.,
            Schlessinger,D., Keller,J., Klotz,E., Kelsoe,G., Umezawa,A.,
            Vescovi,A.L., Rossant,J., Kunath,T., Hogan,B.L., Curci,A.,
            D'Urso,M., Kelso,J., Hide,W. and Ko,M.S.
  TITLE     Transcriptome analysis of mouse stem cells and early embryos
  JOURNAL   PLoS Biol 1 (3), E74 (2003)
   PUBMED   14691545
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BY725521.1, CN717865.1 and AK139659.1.
            
            On or before May 4, 2006 this sequence version replaced
            XM_982926.1, NM_133204.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK139659.1 [ECO:0000332]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-59                BY725521.1         2-60
            60-632              CN717865.1         37-609
            633-1969            AK139659.1         634-1970
FEATURES             Location/Qualifiers
     source          1..1969
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 3.61 cM"
     gene            1..1969
                     /gene="Zscan5b"
                     /gene_synonym="Zfg1; Zfp371"
                     /note="zinc finger and SCAN domain containing 5B"
                     /db_xref="GeneID:170734"
                     /db_xref="MGI:MGI:2159640"
     exon            1..59
                     /gene="Zscan5b"
                     /gene_synonym="Zfg1; Zfp371"
                     /inference="alignment:Splign:2.1.0"
     exon            60..233
                     /gene="Zscan5b"
                     /gene_synonym="Zfg1; Zfp371"
                     /inference="alignment:Splign:2.1.0"
     exon            234..700
                     /gene="Zscan5b"
                     /gene_synonym="Zfg1; Zfp371"
                     /inference="alignment:Splign:2.1.0"
     CDS             341..1747
                     /gene="Zscan5b"
                     /gene_synonym="Zfg1; Zfp371"
                     /note="zinc finger protein 371; zinc finger gonad protein
                     1"
                     /codon_start=1
                     /product="zinc finger and SCAN domain-containing protein
                     5B"
                     /protein_id="NP_573467.2"
                     /db_xref="CCDS:CCDS20772.1"
                     /db_xref="GeneID:170734"
                     /db_xref="MGI:MGI:2159640"
                     /translation="MATNVPPDSPVRSGQSVSLISQVKHGERQNYNPEFWHVKFRGFS
                     PSEGSNWIQDLRSISELCYQWLRPDLNSKEEILDQLVLEQFLICMPPEQQALVKESGV
                     KSCKDLEKLLRDRKRHNWSIIYSQGQAHLLRHPSVGKAEAAEDKWGHTDFSQEHLSNE
                     SEESLNRGQASRELQNLSETEEPSTSQEEGILLGVIPERRQPDYLRPEMSPGSDSVPD
                     LEEAEASVFVGQDPLPALGPAGSLGVKGAVQPQEDTVVDAVPSFTHILERDLALNRDL
                     QSLSGFNLPTSQGVASYMGNTEDGLEAANPEPANPQPEKQVDSLAGQARFQCTECKKS
                     FLYKSRFDLHQRSHTGERPFKCILCNKAFVQSSDLRVHQRVHTGEKPYMCEVCGMEFA
                     HGSTLQGHSRVHTKEKPFVCKDCGQRFCHKGNLNVHFRIHCNLRPYVCKKCNKTFRQQ
                     GTWKRHMKTHLRKRKVSE"
     exon            701..901
                     /gene="Zscan5b"
                     /gene_synonym="Zfg1; Zfp371"
                     /inference="alignment:Splign:2.1.0"
     exon            902..1055
                     /gene="Zscan5b"
                     /gene_synonym="Zfg1; Zfp371"
                     /inference="alignment:Splign:2.1.0"
     exon            1056..1969
                     /gene="Zscan5b"
                     /gene_synonym="Zfg1; Zfp371"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1954..1959
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zscan5b"
                     /gene_synonym="Zfg1; Zfp371"
                     /note="putative"
ORIGIN      
        1 aagcactttg cagagagatc tgggaagaca cgagactgcg ggctagcagg actagcaagc
       61 aactgtaaga cccctgaagc ttggcctccg ctcaagtccc aggataagcc ggccatcacc
      121 ccaaagactc gagagaaaac cacacctgat gcaaactgca agaggtttta ttatcagcta
      181 gctgaggaca aactccttcc atggtgcagg gcaggggagt tcgaccctga tcggtgtctg
      241 gaccaacatc aaacctatct ctgtggcaaa atgggtaggc cagtttacac aggggtcact
      301 tcagaccttt cctagaccaa gggggatatt tcccacagat atggctacga atgtgccgcc
      361 agatagccct gtcaggtcag ggcaatcagt atcactgata tcccaggtaa aacatggaga
      421 aaggcaaaac tacaaccccg agttttggca cgtgaagttc cgaggtttca gtccctctga
      481 agggtccaac tggatccagg acctgaggag catctctgag ctctgctatc agtggctgag
      541 gccggacctg aacagcaagg aggagatcct agatcagctg gtgctggagc agttcctaat
      601 ttgcatgcca ccagagcagc aggccttagt gaaggagagc ggagtgaaga gctgcaaaga
      661 cctggaaaag ctgctgaggg acaggaaacg ccacaactgg tccataatct actcccaagg
      721 acaggcacac ctccttcggc atcccagcgt tgggaaggct gaagccgcag aggataaatg
      781 gggacatacg gacttctccc aggagcacct atcaaatgag agcgaggagt ctctcaatag
      841 aggccaggcc agccgggagc tacagaacct ctctgagacc gaagagccat ccaccagcca
      901 ggaagagggc attttgctgg gagtgattcc tgagaggaga cagccagact acctgagacc
      961 tgagatgagc ccagggagtg actcagttcc tgacttggaa gaggcagagg catctgtgtt
     1021 tgttggtcag gaccctcttc cagccctggg tcccgctggt tctcttggag taaagggtgc
     1081 cgtgcagccc caagaagaca ctgttgtgga tgctgtacca tcgttcaccc atattctgga
     1141 aagagatcta gccttgaaca gagatcttca gagtctttct ggtttcaact tacccacttc
     1201 ccaaggagtg gcgtcctata tgggcaatac agaagatggg ctagaggctg ctaatcccga
     1261 gcctgctaac ccacagcctg agaagcaagt tgacagtctt gctggccagg ctcggtttca
     1321 gtgtactgaa tgcaagaaga gctttcttta caagtcccgg tttgacctcc accagaggtc
     1381 acacacagga gagagaccct tcaagtgcat cttgtgcaac aaggcctttg ttcagtcctc
     1441 cgacctgaga gtccaccagc gtgtccacac aggggagaag ccttacatgt gtgaagtctg
     1501 tgggatggag tttgcccatg ggtccaccct gcagggccac agtcgagtcc acacgaagga
     1561 gaagcctttt gtgtgtaagg attgtgggca acgcttctgc cacaagggca acctcaatgt
     1621 ccatttccgc atccattgca acttgagacc ctatgtctgt aagaagtgta acaagacttt
     1681 ccgacagcag gggacttgga agcgacacat gaaaacccac ctgagaaaga gaaaggtgtc
     1741 tgagtaattc tggatccagt tttttcccct agaaagactg agattgaagt cttttctcag
     1801 agaaatggag gttgggttgc ccctattctg agagtctcat cccttcatgg tcattgtata
     1861 gagtattcat tggtggtctg tttcactatg ccccctgggt ttttattttt gaaatagggt
     1921 tagaacatgt atactaaaag ttaaatgttt taaattaaat tttcattta
//
