LOCUS       XM_011247815            1789 bp    mRNA    linear   ROD 07-FEB-2024
DEFINITION  PREDICTED: Mus musculus zinc finger (CCCH type), RNA binding motif
            and serine/arginine rich 2 (Zrsr2), transcript variant X3, mRNA.
ACCESSION   XM_011247815
VERSION     XM_011247815.4
DBLINK      BioProject: PRJNA169
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000086.8) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Sep 21, 2020 this sequence version replaced XM_011247815.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001635.27-RS_2024_02
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.2
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 02/01/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1789
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6J"
                     /db_xref="taxon:10090"
                     /chromosome="X"
     gene            1..1789
                     /gene="Zrsr2"
                     /gene_synonym="35kDa; 5031411E02Rik; A230052C13Rik;
                     U2af1-rs2; URP"
                     /note="zinc finger (CCCH type), RNA binding motif and
                     serine/arginine rich 2; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 14 ESTs, 135 long SRA
                     reads, and 98% coverage of the annotated genomic feature
                     by RNAseq alignments, including 13 samples with support
                     for all annotated introns"
                     /db_xref="GeneID:22184"
                     /db_xref="MGI:MGI:103287"
     CDS             771..1772
                     /gene="Zrsr2"
                     /gene_synonym="35kDa; 5031411E02Rik; A230052C13Rik;
                     U2af1-rs2; URP"
                     /codon_start=1
                     /product="U2 small nuclear ribonucleoprotein auxiliary
                     factor 35 kDa subunit-related protein 2 isoform X2"
                     /protein_id="XP_011246117.1"
                     /db_xref="GeneID:22184"
                     /db_xref="MGI:MGI:103287"
                     /translation="MFTTFGMEQCRRDDYDPDSSLEFSEEEIYQQFLDFYYDVLPEFK
                     SVGKVIQFKVSCNLEPHLRGNVYVQYQSEEDCQAAFSVFNGRWYAGRQLQCEFCPVTR
                     WKMAICGLFEVQQCPRGKHCNFLHVFRNPNNEYRDANRDLYPSPDWTSSSFGKNSERR
                     ERASHYDEYYGRSRRRRRSPSPDFYKRNGESDRKSSSRHRVKKSHRYGMKSRERRSSP
                     SRRRKDHSPGPWSQSRRSHRSRSRSRSRSRSRSRTRSRSRGRGRSRSRSRSRSRGRSR
                     SRGRGSGRGRGRGRGRGRNQSRSWSQSRSRSSSSSRSRSRGRRSGSRDKTTQSPKSK"
ORIGIN      
        1 gttgctctgg atgtggaatt gctccctctc ttcctgctcc gccctcccac gcggcctcag
       61 acaggctagg ctgcccttac atccgccacg taaatgagga cgactcttaa acttctgatc
      121 ctcctgcctc tgccttcgaa gtgtcggggt gacagagttt cggcgaccat ggcactttgc
      181 aagttgatcg gttcgtgcgt gctaggcaaa ccactctgcc aaaattggca cagaaagagg
      241 aggaagaaga tcctcttgct gaagaaaaac gactagaaga agaaaggttg ttagaggaag
      301 agaggcagag actgcatgaa gaatggttac tgagggaaga aaaggcacaa gaagaattca
      361 gggcaaagaa gaaaaaagaa gaggaagctc gaaaacggaa ggaagaacta gagagaaagt
      421 taaaggcaga atgggaagaa cagcagagaa aagagcgaga ggaagaggag cagaaacgac
      481 aagagaagag agaaagagag gaagctgtgc agaagatgct ggatcaggct gaaaatgagc
      541 tggaaaatgg tggcacctgg cagaacccag aaccgcccat ggatataaga gtactggaga
      601 aagatcgagc caactgtccg ttctacagca aaacgggagc ttgcagattt ggagatagca
      661 cttatgtttt tcatctcctt ctgtgatgtt ccctgggctt tggagcagtt tagaggtgtt
      721 cacgtaaaca caacttcccc acatcaagtc ccaccttgct gattaagggc atgtttacaa
      781 catttggaat ggagcagtgt cggagggatg actatgaccc tgactcaagc ctagaattca
      841 gtgaagaaga gatctaccaa cagttcctag acttctatta tgatgtcctg cctgaattca
      901 agagtgtggg aaaagtgatt cagtttaagg tcagctgcaa cctggaacct catctgaggg
      961 gcaatgtgta tgttcagtac cagtcggaag aagactgtca agcagccttt tctgttttta
     1021 atggacgatg gtatgcagga cgacagctcc agtgtgaatt ctgcccagtg acccggtgga
     1081 aaatggcaat ttgtggctta tttgaagtcc agcagtgtcc aagaggaaag cactgcaact
     1141 ttcttcacgt gttcagaaat cccaacaatg aatataggga cgctaataga gacctctacc
     1201 cgtctccaga ttggactagc tcctccttcg gtaagaattc agagaggagg gaaagggcca
     1261 gtcactatga tgaatactat ggcaggtcaa ggaggaggag gaggagcccg agtcccgact
     1321 tctacaagag aaatggcgag tctgacagga agagcagtag cagacacagg gtgaagaaat
     1381 ctcacagata tggaatgaag agtcgtgaga ggcgcagttc acccagtaga agaagaaagg
     1441 accacagtcc gggcccctgg agccagagca ggaggagcca ccgcagcagg agtcgcagtc
     1501 gcagccgcag ccgcagccgc agtcggaccc gtagccgaag ccggggccgg ggccggagca
     1561 ggagccggag ccggagcagg agcaggggcc ggagcaggag caggggccgg ggcagcggca
     1621 ggggcagggg caggggcagg ggcaggggca ggaaccagag caggagttgg agtcaaagcc
     1681 ggagccggag tagtagctcg tcaaggtcca gaagtcgtgg caggaggtca ggtagtagag
     1741 acaaaaccac ccagagtccc aaatctaaat aaacttggtt gtttttaaa
//
