LOCUS       NM_026021               2713 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus zinc finger, MYND domain containing 19 (Zmynd19),
            transcript variant 1, mRNA.
ACCESSION   NM_026021 XM_913434
VERSION     NM_026021.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2713)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 2713)
  AUTHORS   Saita,S., Shirane,M., Ishitani,T., Shimizu,N. and Nakayama,K.I.
  TITLE     Role of the ANKMY2-FKBP38 axis in regulation of the Sonic hedgehog
            (Shh) signaling pathway
  JOURNAL   J Biol Chem 289 (37), 25639-25654 (2014)
   PUBMED   25077969
REFERENCE   3  (bases 1 to 2713)
  AUTHORS   Wiese,C.B., Ireland,S., Fleming,N.L., Yu,J., Valerius,M.T.,
            Georgas,K., Chiu,H.S., Brennan,J., Armstrong,J., Little,M.H.,
            McMahon,A.P. and Southard-Smith,E.M.
  TITLE     A genome-wide screen to identify transcription factors expressed in
            pelvic Ganglia of the lower urinary tract
  JOURNAL   Front Neurosci 6, 130 (2012)
   PUBMED   22988430
  REMARK    Publication Status: Online-Only
REFERENCE   4  (bases 1 to 2713)
  AUTHORS   Francke,F., Richter,D. and Bachner,D.
  TITLE     Immunohistochemical distribution of MIZIP and its co-expression
            with the Melanin-concentrating hormone receptor 1 in the adult
            rodent brain
  JOURNAL   Brain Res Mol Brain Res 139 (1), 31-41 (2005)
   PUBMED   15950311
  REMARK    GeneRIF: data support the notion that MIZIP might interact with
            melanin-concentrating hormone receptor 1 (MCHR1) in a cell type
            specific manner in vivo, suggesting a role in the regulation of MCH
            signalling in distinct regions of the mammalian brain
REFERENCE   5  (bases 1 to 2713)
  AUTHORS   Bachner,D., Kreienkamp,H.J. and Richter,D.
  TITLE     MIZIP, a highly conserved, vertebrate specific
            melanin-concentrating hormone receptor 1 interacting zinc-finger
            protein
  JOURNAL   FEBS Lett 526 (1-3), 124-128 (2002)
   PUBMED   12208518
REFERENCE   6  (bases 1 to 2713)
  AUTHORS   Piao,Y., Ko,N.T., Lim,M.K. and Ko,M.S.
  TITLE     Construction of long-transcript enriched cDNA libraries from
            submicrogram amounts of total RNAs by a universal PCR amplification
            method
  JOURNAL   Genome Res 11 (9), 1553-1558 (2001)
   PUBMED   11544199
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CJ154709.1, AK012484.1, AL935039.7 and AL732585.8.
            
            On Jul 15, 2015 this sequence version replaced NM_026021.3.
            
            Transcript Variant: This variant (1) encodes encodes the longer
            isoform (1).
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK088063.1, AK012484.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-75                CJ154709.1         1-75
            76-1256             AK012484.1         52-1232
            1257-1320           AL935039.7         3931-3994
            1321-2713           AL732585.8         2001-3393
FEATURES             Location/Qualifiers
     source          1..2713
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="2"
                     /map="2 16.86 cM"
     gene            1..2713
                     /gene="Zmynd19"
                     /gene_synonym="2700064H14Rik; mizip"
                     /note="zinc finger, MYND domain containing 19"
                     /db_xref="GeneID:67187"
                     /db_xref="MGI:MGI:1914437"
     exon            1..271
                     /gene="Zmynd19"
                     /gene_synonym="2700064H14Rik; mizip"
                     /inference="alignment:Splign:2.1.0"
     CDS             221..904
                     /gene="Zmynd19"
                     /gene_synonym="2700064H14Rik; mizip"
                     /note="isoform 1 is encoded by transcript variant 1;
                     melanin concentrating hormone receptor interacting zinc
                     finger protein; zinc finger MYND domain-containing protein
                     19; MCH-R1-interacting zinc finger protein;
                     melanin-concentrating hormone receptor 1-interacting zinc
                     finger protein"
                     /codon_start=1
                     /product="zinc finger MYND domain-containing protein 19
                     isoform 1"
                     /protein_id="NP_080297.1"
                     /db_xref="CCDS:CCDS15742.1"
                     /db_xref="GeneID:67187"
                     /db_xref="MGI:MGI:1914437"
                     /translation="MTDFKLGIVRLGRVAGKTKYTLIDEQDIPLVESYSFEARMEVDA
                     DGNGAKIFAYAFDKNRGRGSGRLLHELLWERHRGGVAPGFQVVHLNAVTVDNRLDNLQ
                     LVPWGWRPKAEETSSKQREQSLYWLAIQQLPTDPIEEQFPVLNVTRYYNANGDVVEEE
                     ENSCTYYECHYPPCTVIEKQLREFNICGRCQVARYCGSQCQQKDWPAHKKHCRERKRP
                     FQHELEPER"
     exon            272..331
                     /gene="Zmynd19"
                     /gene_synonym="2700064H14Rik; mizip"
                     /inference="alignment:Splign:2.1.0"
     exon            332..438
                     /gene="Zmynd19"
                     /gene_synonym="2700064H14Rik; mizip"
                     /inference="alignment:Splign:2.1.0"
     exon            439..579
                     /gene="Zmynd19"
                     /gene_synonym="2700064H14Rik; mizip"
                     /inference="alignment:Splign:2.1.0"
     exon            580..760
                     /gene="Zmynd19"
                     /gene_synonym="2700064H14Rik; mizip"
                     /inference="alignment:Splign:2.1.0"
     exon            761..2713
                     /gene="Zmynd19"
                     /gene_synonym="2700064H14Rik; mizip"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1206..1211
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zmynd19"
                     /gene_synonym="2700064H14Rik; mizip"
                     /note="hexamer: AATAGA"
     polyA_site      1259
                     /gene="Zmynd19"
                     /gene_synonym="2700064H14Rik; mizip"
                     /note="major polyA site"
     regulatory      1547..1552
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zmynd19"
                     /gene_synonym="2700064H14Rik; mizip"
                     /note="hexamer: AATGAA"
     polyA_site      1567
                     /gene="Zmynd19"
                     /gene_synonym="2700064H14Rik; mizip"
                     /note="major polyA site"
     regulatory      1718..1723
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zmynd19"
                     /gene_synonym="2700064H14Rik; mizip"
                     /note="hexamer: GATAAA"
     polyA_site      1739
                     /gene="Zmynd19"
                     /gene_synonym="2700064H14Rik; mizip"
                     /note="major polyA site"
     regulatory      2022..2027
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zmynd19"
                     /gene_synonym="2700064H14Rik; mizip"
                     /note="hexamer: CATAAA"
     polyA_site      2043
                     /gene="Zmynd19"
                     /gene_synonym="2700064H14Rik; mizip"
ORIGIN      
        1 tcgctggggt gcgcacggtg gtggcggcgg cgcgtggcag gtccggcggg cgcgaggcgg
       61 cggcggtggc ccgagcccgg cccagcctcg tccgcccgcg gcccgcccgg cctgactccg
      121 gcaccggccc gacccggagt gccgcggcct cgctacggcc cggtccggtc cggagcctcc
      181 cgagggagcg gctccgcctg ccgagagcgc aggcctggcc atgaccgact ttaaattggg
      241 catcgtgcgg ctcggccggg tggccgggaa gaccaaatac acactgatcg atgagcaaga
      301 cataccactg gtggagagct actcctttga ggctcgaatg gaagtagatg ctgatggaaa
      361 tggtgctaag atatttgcat atgcctttga caaaaaccga ggaaggggct ctggcaggct
      421 tctacatgag ctgctgtggg aacgacacag gggaggtgtg gctcccgggt ttcaggtggt
      481 acatctcaat gctgtgactg tggacaatcg cctggacaac ctgcagctgg taccatgggg
      541 ctggcgaccc aaagctgaag agacctccag caaacaaagg gagcaaagct tatactggct
      601 tgcaatccag cagcttccca cagaccctat agaagaacaa ttccctgtct tgaatgtgac
      661 ccggtactat aatgccaatg gggatgtggt ggaagaagaa gaaaattcct gtacctacta
      721 tgagtgtcat tatcctcctt gtacggtgat tgaaaagcag cttcgagagt tcaacatctg
      781 tgggcgttgc caggtggctc gatactgtgg ctctcagtgc cagcagaagg actggcctgc
      841 ccacaagaag cactgtcggg agaggaagcg tcccttccag catgagcttg agccagagcg
      901 atgacgggct gaagagctgc cactgctgca ggttcaaagt ttccagctcc tcatgagcac
      961 agcggaagac agactgtcag ttgaacctgg aggtgccaaa gaagccagca atggatccag
     1021 agcagctgcc ataagacctc acagcaacaa gcagcctgtg gggacagtgc ccctccagtt
     1081 ttcacctcca gcagagacaa cagggaggct ccctaggacc tttctcatta tttatatgtt
     1141 aatatgtttg taaactcatg tacagttttt ttggggggga ggcaagggga gggttagcaa
     1201 cttcaaatag aatcatttgt tgtattcctc aaatggtaaa cagtcaccac tcagctagag
     1261 actgtcgtgt agtcaagctt ctctcttgga cagtgggggg tgggggggtt cccactgaga
     1321 ggcttgcaca gagtcatgtc taaacaggca gagtaaaggg gtagaatcat cctcgtggcc
     1381 agtctctgct cctcaaaccc ctgttgttca gcctatttct ttttttctga gatagggtct
     1441 ctcctggaac ttcatatgta aaccaggcta gcctcgaact cacagatcca cctgcctctg
     1501 cctcctgaca tgcctggttc aacaattttt gaaaggaact aattataatg aaactggttt
     1561 taatgaatgg actggaaaga cctgccatta ttccaggttg gcctgtgagg agcagagagt
     1621 gttagcaagg tgtgcaaagg aggctctgtt ctctctggta ataggtgttc tggagtgttc
     1681 cagtaggttg gctacttgtc ttagtttcta ttgctgtgat aaagcatgag caaaagcaac
     1741 ttgggaagga gggattattt cagcttactg tttcacatcg cagtcctctg aaggaagtca
     1801 ggactagagc tgatgcagag gccatggagg actgcttact gtttgctctt catatcttgc
     1861 tcagcctaac ttcttgtagt gcccaggatt gccagcccag gggtagcatt gcccaaagtg
     1921 agctaggctc tcccaaatca atacttatga aaaatcagga cagagtagta gggccatttt
     1981 cataattgtc ctctcaaaat gacttgtttg tattaagttc acataaaact agccagcaaa
     2041 gtactatata tccctatgtt ggtaaatttc aagcacacgt tcaagcacag agacccttgg
     2101 agccagtagt aagctgctgc ccctgtccca attgtgggtt ggaatagata gtgtgataga
     2161 cagccaaaat gaggcttcat tcactgctga gctgtggttc tcaggataac tgttctttgg
     2221 gggattcaca tgtctgaggg ctgtttttca tttggcatct tgatcactgc agaagtgaat
     2281 tcaccatggc tggaatctta cctatctcag ggtatggcct ctcttgttca agctttctac
     2341 ctgactgctg acctcggcag ctctctggcc tggttggtct gcaggtgcct gttaaacctt
     2401 tccctattgc agcatatcta tcacagtctt gattttctgt gagttaaacg ctgtctggct
     2461 cagcacagcc ctttggtagc cttagacttg taagttcagc ttctatggct gtttttgcat
     2521 ttatgctaca cagtggctta gaagggaaga cagctgaaac tcaagatggc accattcctt
     2581 gagtgtttaa gcttggagtg ttgctatgat agacctgcat caagaaactt cctcctttca
     2641 gttctgaagg ttatggcttt ttagttggga tccctactca gaccccatgt tgaacatcaa
     2701 tctgatcatt ggg
//
