LOCUS       NM_026670               3854 bp    mRNA    linear   ROD 05-AUG-2023
DEFINITION  Mus musculus zinc finger, MYM domain containing 1 (Zmym1),
            transcript variant 1, mRNA.
ACCESSION   NM_026670
VERSION     NM_026670.5
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3854)
  AUTHORS   Cobellis G, Nicolaus G, Iovino M, Romito A, Marra E, Barbarisi M,
            Sardiello M, Di Giorgio FP, Iovino N, Zollo M, Ballabio A and
            Cortese R.
  TITLE     Tagging genes with cassette-exchange sites
  JOURNAL   Nucleic Acids Res 33 (4), e44 (2005)
   PUBMED   15741177
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3854)
  AUTHORS   Stryke D, Kawamoto M, Huang CC, Johns SJ, King LA, Harper CA, Meng
            EC, Lee RE, Yee A, L'Italien L, Chuang PT, Young SG, Skarnes WC,
            Babbitt PC and Ferrin TE.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
REFERENCE   3  (bases 1 to 3854)
  AUTHORS   Piao Y, Ko NT, Lim MK and Ko MS.
  TITLE     Construction of long-transcript enriched cDNA libraries from
            submicrogram amounts of total RNAs by a universal PCR amplification
            method
  JOURNAL   Genome Res 11 (9), 1553-1558 (2001)
   PUBMED   11544199
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL606985.26, CF164697.1, AK167508.1, AK016783.1 and AK035618.1.
            
            On Sep 29, 2017 this sequence version replaced NM_026670.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK035618.1, AK167508.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164138 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-2                 AL606985.26        114390-114391       c
            3-20                CF164697.1         1-18
            21-97               AK167508.1         5-81
            98-98               AK016783.1         80-80
            99-3357             AK167508.1         83-3341
            3358-3854           AK035618.1         3336-3832
FEATURES             Location/Qualifiers
     source          1..3854
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 61.22 cM"
     gene            1..3854
                     /gene="Zmym1"
                     /gene_synonym="5830412B09Rik"
                     /note="zinc finger, MYM domain containing 1"
                     /db_xref="GeneID:68310"
                     /db_xref="MGI:MGI:1915560"
     exon            1..159
                     /gene="Zmym1"
                     /gene_synonym="5830412B09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            160..309
                     /gene="Zmym1"
                     /gene_synonym="5830412B09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            310..548
                     /gene="Zmym1"
                     /gene_synonym="5830412B09Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             355..3306
                     /gene="Zmym1"
                     /gene_synonym="5830412B09Rik"
                     /note="isoform 1 is encoded by transcript variant 1"
                     /codon_start=1
                     /product="zinc finger MYM-type protein 1 isoform 1"
                     /protein_id="NP_080946.3"
                     /db_xref="CCDS:CCDS18663.1"
                     /db_xref="GeneID:68310"
                     /db_xref="MGI:MGI:1915560"
                     /translation="MLPAVPGTAVRLSCAKCKRVFQEGQTAFQRKGSAELFCSRLCID
                     GYPSPAVSPAPLKRMCLNCSRDILSLKDMKSVQLEDSSCDKNFCSQSCLTSYEEKRKP
                     GVTIYTDSSLPKCSMCQKTSTKPPRILRSSPCKSLQLSDEMIAITNDLGNVEVYCSAC
                     SSSYNSAVMESPSVNVSMVHSSSKENLCPKKYPVISNIMSLVNNHVDLVVNTDLLQGT
                     LSSLPTDVIMSNSASESSSGVGNSADQPGLLPPCSVLCEDTAAPGEGVENNSEKSMEG
                     NDRLCLSKSTLTEQNIKTEPPGEPWSPALQHLHPSPADNIAFCYSCYLFFQKKFSCRR
                     EAFATQGTADWEKMLGNFRKHEESDVHLKSLQFWRQYQFLDAIPCDNSSVYSKQIEGN
                     KKYLRLIIENILFLGKQCLLLKGNDQSVSPMNKGSFLELLELRARDRGEVFQLMSSHV
                     DFYSSTLVQEEIIEMIKDEMLQDIVSEINASSAFSIICEEIAGSAAERQLSVCVRYPQ
                     KTPSAVLVKERFLGFVTAEEVTGVHVHGRIKAYLQQVGVDFNKICGQAYDSATNFTVK
                     LNEVVAEFKKEEPRALYVHCHAHFLELAVISFCKEVKELREALHTLCSLFNTVHVSEE
                     MLASLQTMCKLSLNKTCKKHTSQSCWPAHDHLLLAVTDCLPEVVEVLASVSRRCAGTA
                     VAAELEDLLAMVTKFEFIFCLKFLYRVLSITGILSREFQSETVDIFSLFSKIEAILEC
                     LSSERNDTYFKNIWDGADEICKKITSKGFDVEKPSFQKRRKVQRTVDPGNSEHMFFPT
                     SADEQYKFNIYYQGLDTVLKHLKLYFSEFDYCKMKQISELLLKWNEPLNEATAKHIQE
                     FYKLDADIIPELRFYRQYAGFNFIAEDGSLSFIDLGSLFIQHALHNNIPCITKLLHIA
                     LSWPITSANNEKSFSTLSHLKTYLLRTMGQEKLSSLALIAVEQELVNKLMEPERLGGI
                     VEKFISQMKDT"
     exon            549..723
                     /gene="Zmym1"
                     /gene_synonym="5830412B09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            724..874
                     /gene="Zmym1"
                     /gene_synonym="5830412B09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            875..1003
                     /gene="Zmym1"
                     /gene_synonym="5830412B09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1004..1041
                     /gene="Zmym1"
                     /gene_synonym="5830412B09Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1042..3854
                     /gene="Zmym1"
                     /gene_synonym="5830412B09Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gaggggcgga gccggcgggg ttgtttgcac ggcaaaatgc gagtgggcgc ttcccgccgc
       61 tgagttggag acagatcagc catcctcgtg gagccgctca ggcccgcttt tccagagaga
      121 ggcggcattt ctcccgtcct gaggagggtg acgcgacagc acaccacatg tattcaagag
      181 ctggaggagg ccagaagctg gggttaaatc tcttgaaact ggagttacag gtgctgggaa
      241 ctgaacccag gtcctctgta agagcaacaa agtgccctta accaatgaat cacccttcta
      301 atcctaaatc tccacagttg acggtcttct ctcctctcac ctgacttgaa taaaatgctt
      361 cctgcagttc caggcacagc tgttcgactc tcctgtgcca aatgtaaaag agtttttcag
      421 gagggacaga cagcttttca gaggaaaggg tctgctgagc ttttctgctc aagactatgc
      481 attgatgggt acccgtcacc tgctgtgtct ccagctcctc tcaaaaggat gtgcttaaat
      541 tgctcaagag acattttaag tctaaaggat atgaagagtg tccagttgga ggatagtagt
      601 tgtgacaaaa acttttgtag ccaatcttgt cttacatcat atgaagaaaa aagaaaacca
      661 ggtgttacca tatatactga tagcagtttg cccaagtgca gcatgtgtca gaagacatct
      721 actaaaccgc ccagaatact tagatcttcc ccgtgcaaat cactgcagct gtcagatgag
      781 atgattgcga ttactaacga cttggggaac gtagaggttt actgctctgc ttgttcttct
      841 tcatacaaca gtgctgtgat ggagtctcct tcagttaatg tatccatggt gcacagttct
      901 tcaaaagaga atctctgtcc aaagaaatat ccagttataa gcaatataat gtcgttagta
      961 aataatcatg ttgacctggt cgtgaacact gatctcttac aaggtacact ttcttctcta
     1021 ccgacagatg tcatcatgag caactcagcc agtgagtcca gcagtggtgt tggtaatagt
     1081 gcggaccagc caggcctcct cccaccttgc tcggtgctct gtgaggacac agctgctccc
     1141 ggtgagggag tagagaacaa cagtgagaaa tccatggaag gaaatgatag gctgtgtctc
     1201 tcaaagtcca cattaacaga acagaacatt aagacagagc ctccgggaga gccctggagc
     1261 ccagctctcc agcatctgca tcccagccct gcagacaata tcgcattctg ctattcttgc
     1321 tacttgttct tccagaaaaa atttagctgt cggagagaag cttttgcaac ccaaggaact
     1381 gctgactggg agaaaatgct gggaaatttc agaaagcatg aagaaagtga cgtgcactta
     1441 aagtcactgc aattttggag gcaataccag tttctcgatg ctattccgtg tgacaattca
     1501 tctgtttatt caaaacagat tgaaggaaat aaaaagtacc taaggctcat cattgagaac
     1561 attttatttc ttggaaaaca gtgcttgctg ttaaaaggaa atgaccagtc tgtttcaccc
     1621 atgaataaag gcagtttttt ggaattgcta gaacttagag caagagatag aggagaggta
     1681 tttcagctca tgagttccca cgtggacttc tatagcagca cgcttgtcca ggaggagatt
     1741 attgaaatga taaaggatga aatgttgcaa gacatcgtga gtgagatcaa cgcctcctca
     1801 gccttttcaa taatctgcga ggagatagct ggtagtgccg ctgagagaca gctttccgtg
     1861 tgtgtgaggt acccacaaaa gacgccaagt gctgtcttgg ttaaggaaag gttcctgggg
     1921 tttgtgactg ccgaggaggt gactggggtc cacgtgcatg ggcggatcaa agcttacctg
     1981 cagcaggttg gagttgattt taataaaata tgtggccaag cctatgatag tgccacaaat
     2041 tttacggtaa aattgaatga agttgtagca gaattcaaga aggaagagcc aagagctctc
     2101 tatgtgcatt gtcacgccca ttttttggag ttagcggtga ttagcttctg taaggaggtg
     2161 aaggagctcc gcgaggcact acacactctc tgctctttgt tcaacacagt tcatgtgtct
     2221 gaagaaatgt tggcaagttt gcaaaccatg tgtaagctaa gtctaaataa aacttgtaag
     2281 aaacacacgt cacagtcgtg ttggccagcc cacgaccatt tgctgctggc cgtgacggac
     2341 tgccttccgg aggtcgttga ggtgctggcg tcagtgtcac gccggtgcgc aggcacagct
     2401 gtggctgccg agctggagga cctgttggcc atggttacca agtttgaatt tatattttgt
     2461 ttgaaatttc tttatcgagt actcagtatc acagggattc tttctagaga gtttcaaagt
     2521 gaaactgttg acatcttttc tttgttttca aaaatagaag caattttgga atgtttatct
     2581 tctgaaagga atgatacata ctttaaaaat atctgggatg gagcagatga aatatgtaaa
     2641 aagataacca gtaagggttt tgatgttgag aaaccctctt ttcaaaaaag aagaaaagtt
     2701 caaagaacag tagatcctgg caactcagag catatgtttt ttcctacttc agcagatgaa
     2761 caatataaat ttaatattta ctaccaaggt ctggacacgg tattaaaaca tttaaagtta
     2821 tatttttcag agtttgacta ttgtaaaatg aaacaaattt cagagctgtt acttaagtgg
     2881 aatgagccat taaatgaagc aacagccaag cacatccagg aattctataa gcttgatgca
     2941 gacatcattc ccgagctccg attttaccgg cagtatgcag gtttcaactt catcgcagag
     3001 gatgggtcct taagcttcat tgacctaggc tctttgttta ttcagcatgc tctccacaat
     3061 aatattcctt gtatcacgaa gctgttgcat attgctttat cttggccaat tacttcagca
     3121 aataatgaga agtcattttc cacgctgtct catcttaaaa catacttact tcgtaccatg
     3181 ggacaagaga aacttagtag cctggctctg atagctgttg agcaggaact ggtaaataaa
     3241 ctgatggaac ctgaaagact ggggggaatt gtcgaaaagt tcattagtca aatgaaagat
     3301 acgtgagaca aacttgcaac tttgagctta attaaaagaa ttctgtggtt ttattagaat
     3361 cctaatgaag ttttgtttgt tggaggttct ttgagacaga tagggatctt gctctgtagc
     3421 ctaggctagt cttgaatttg taagctcttg agactgattg accctcttac ctgactcttc
     3481 tcctttaaag tattccagtt gacgtattgt gtcgtaggca catctacatt taatacattt
     3541 actgagcaac tactatatgc cagatagtat gatatgtgct ggaggtatag cagagaatta
     3601 ggagcctaga gtcaattgaa catagttttt tctaatatag aaatctagta agcctggcac
     3661 agcggcacac tttcctccag gactgtgact cattggtaac atacttaacg tccctagaat
     3721 gcataaggcc cagattcaat tcccagtgcc aaggaagtcc tgtaatacca tcatagctgc
     3781 tagtgaccgt gtgcattgtt aaataaaatt ttaactaaaa accattgctg ggaagagaat
     3841 agttctacag aagc
//
