LOCUS       NM_001177505            5018 bp    mRNA    linear   ROD 02-MAY-2024
DEFINITION  Mus musculus zinc finger with KRAB and SCAN domains 7 (Zkscan7),
            mRNA.
ACCESSION   NM_001177505 XM_001474510 XM_988711
VERSION     NM_001177505.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 5018)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC125374.4.
            
            On Jun 18, 2019 this sequence version replaced NM_001177505.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR9219382.83443.1,
                                           SRR10223970.12124.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384, SAMN00849385
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-248               AC125374.4         70042-70289         c
            249-774             AC125374.4         68158-68683         c
            775-922             AC125374.4         66301-66448         c
            923-996             AC125374.4         64716-64789         c
            997-1090            AC125374.4         64329-64422         c
            1091-5018           AC125374.4         58488-62415         c
FEATURES             Location/Qualifiers
     source          1..5018
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="9"
                     /map="9 73.21 cM"
     gene            1..5018
                     /gene="Zkscan7"
                     /gene_synonym="Zfp167"
                     /note="zinc finger with KRAB and SCAN domains 7"
                     /db_xref="GeneID:382118"
                     /db_xref="MGI:MGI:3040678"
     exon            1..248
                     /gene="Zkscan7"
                     /gene_synonym="Zfp167"
                     /inference="alignment:Splign:2.1.0"
     exon            249..774
                     /gene="Zkscan7"
                     /gene_synonym="Zfp167"
                     /inference="alignment:Splign:2.1.0"
     CDS             367..2523
                     /gene="Zkscan7"
                     /gene_synonym="Zfp167"
                     /note="zinc finger protein 167"
                     /codon_start=1
                     /product="zinc finger protein with KRAB and SCAN domains
                     7"
                     /protein_id="NP_001170976.1"
                     /db_xref="CCDS:CCDS52970.1"
                     /db_xref="GeneID:382118"
                     /db_xref="MGI:MGI:3040678"
                     /translation="MTMEGRGTLDIIPRTAMYQKQEGNLTVKQEPGSQTWGQKNYLPV
                     CEIFRLHFRQLCYHEMSGPQQALSRLRELCHWWLMPEVHTKEQILELLVLEQFLSILP
                     RELQTWVQLHHPETGEEAVAMVEDFQRHLSESGEVSPPVQEQDVHLKKMGALSAAEQS
                     PTSTSNQGLAPGALLDPPCDPGAGHDPAFPKVGNPRAQAVATVLRMARPQETAVNKDY
                     KQEKWSVLCETEVVRDEHGLASLGKNRIGSSEFSPKQDISKGSHSLDTSSEGLFGVAL
                     VERASGDICKDPLAQREEHPSDEEGSGLESDFLEKEDKNSTEDRNEECKDVGVHPEMP
                     SSPVEHQGEAKRQKSYQCDECGKVFSQSSRFLGHQRIHVGERPFECNKCGKTFQQISQ
                     LVVHLRIHTQEKPYECCESGKTYCHSSHLIQHQRLRNGDKPYKGNECVRASIQSSQLL
                     VHKRTHTGEKPDESGEAFIWNKSLIQHQVLHISKKLYECNECGKAFYTNRNLIDHQRI
                     HTGEKPYECIECGKSFSRSKCLTRHQSLHTGEKTYKCSECGKAFLQNSQLIDHKRVHT
                     GEKPFECSECGKKFSLGKCLIRHQRLHTGEKPYKCSECGKSFNQNSHLIIHQRIHTGE
                     KPYGCNECGKVFSYSSSLMVHQRTHTGEKPYKCKDCMKAFGDSSQLIVHQRVHTGEKP
                     YECAECGKAFSQRSTFNHHQRIHNVAKPSSRLQAVS"
     exon            775..922
                     /gene="Zkscan7"
                     /gene_synonym="Zfp167"
                     /inference="alignment:Splign:2.1.0"
     exon            923..996
                     /gene="Zkscan7"
                     /gene_synonym="Zfp167"
                     /inference="alignment:Splign:2.1.0"
     exon            997..1090
                     /gene="Zkscan7"
                     /gene_synonym="Zfp167"
                     /inference="alignment:Splign:2.1.0"
     exon            1091..5018
                     /gene="Zkscan7"
                     /gene_synonym="Zfp167"
                     /inference="alignment:Splign:2.1.0"
     regulatory      4996..5001
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zkscan7"
                     /gene_synonym="Zfp167"
                     /note="hexamer: AATAAA"
     polyA_site      5018
                     /gene="Zkscan7"
                     /gene_synonym="Zfp167"
                     /note="major polyA site"
ORIGIN      
        1 atgcttcccg tcccgccgtc gttgccattt cctagtgtcc tggaggtgtg tggggccgtt
       61 gagccgtcac gcatgacggt ggcgacgcgg tggaaagtgc ggcccgcact cgggccgcga
      121 cgcgggcggt gccggggtgc ttacccgagg cggagccgcg tcgtcctcgt gttgtggtcg
      181 ctcggcttgg ggtcggctcg agttgttggc tcccgtgcgt cagcgctgca cggggcagac
      241 gcggccaggt gacactttcc tcacttcctt tcttgactct gaaaaaacag cccccgcagt
      301 ttgaagcaga gactcatttt cagtgtgcct gctgtagctg gaaccagctt ctcttttggg
      361 atcacaatga ccatggaagg cagggggaca ttagatatca tccccaggac tgccatgtat
      421 cagaagcagg aggggaactt gactgtgaag caggaaccag gaagccagac atggggacag
      481 aagaactacc ttcccgtctg tgaaatattc cgactgcact tcaggcagtt gtgctaccat
      541 gagatgtctg ggcctcagca agccctgagc cggctcaggg agctctgcca ctggtggctg
      601 atgccagagg tccacaccaa ggaacagatc ctggaactgc tggtgctgga gcagttcctg
      661 agcatcctgc ccagggagct tcagacctgg gtacagctcc atcaccctga gactggcgag
      721 gaagctgtgg ctatggtgga ggatttccag agacacctta gtgagtcagg ggaggtctca
      781 cctccagtac aagaacagga tgtgcattta aagaagatgg gagcactgag tgcagctgag
      841 cagtcgccta cctcaacctc caatcagggc ttggcccctg gtgcactctt agatcctccc
      901 tgtgacccag gagctggaca cgatcctgct tttcccaaag tggggaaccc cagagcccag
      961 gcagtggcta ctgtgcttag gatggccagg cctcaggaga cggcagtgaa caaggactat
     1021 aagcaagaaa agtggagtgt cctgtgtgag acggaggtgg taagagatga gcacggcctg
     1081 gcctctctgg gtaagaacag gataggaagt tctgagttca gtccaaagca ggacatttct
     1141 aaaggatcac attcgcttga cacatcctca gagggactct ttggagtggc actggtggaa
     1201 agagcgtctg gtgacatctg taaagatcct ttagcacaga gggaagagca tccctcagat
     1261 gaagaaggca gcggactaga aagtgatttc ttggagaagg aagataaaaa ttctacagaa
     1321 gacagaaatg aggaatgtaa agatgtaggg gtgcatccag aaatgccctc cagtcctgtt
     1381 gagcatcagg gagaagcaaa gaggcagaag tcctatcaat gtgatgagtg tggcaaagtt
     1441 tttagccaga gctctcgctt ccttggacat cagagaatcc acgttggaga gagacccttt
     1501 gaatgtaaca agtgtgggaa gacctttcaa cagatatctc agctagttgt tcacctcaga
     1561 atacacactc aggaaaaacc ttatgaatgt tgtgagtctg ggaagactta ctgtcacagt
     1621 tcccacctca ttcaacacca gagactccgt aatggagaca agccttataa aggaaatgaa
     1681 tgtgtaagag cgtccattca gagttcccag ctcctggtcc acaagagaac ccacactgga
     1741 gagaaacctg atgaatctgg cgaggcattc atttggaata aaagtcttat tcaacatcag
     1801 gtccttcaca ttagtaagaa gctctatgag tgtaatgagt gtgggaaagc cttctatacc
     1861 aacagaaatc ttattgacca ccagagaatc cacactgggg agaagcctta tgaatgtatt
     1921 gaatgtggca agtccttcag tcggagtaag tgtcttactc gacatcagag cctccacact
     1981 ggggaaaaaa catacaaatg tagtgaatgt gggaaagcct tccttcagaa ctctcagctc
     2041 attgaccaca aacgagttca tactggtgaa aagccttttg aatgtagtga atgtggtaag
     2101 aaattcagtt taggtaaatg ccttattcgg caccagagac ttcacactgg agaaaagccc
     2161 tataaatgca gtgagtgtgg aaaatccttc aaccaaaact ctcacctcat tatacaccag
     2221 agaattcaca ctggtgaaaa accttatgga tgtaatgagt gtgggaaggt ctttagttat
     2281 agttctagcc ttatggttca tcagagaacc catactggtg aaaagcccta taaatgtaaa
     2341 gattgcatga aagcctttgg tgacagttca cagcttattg tgcaccagag ggttcacact
     2401 ggtgagaagc cttatgaatg tgctgaatgt gggaaagcct ttagtcagcg gtccaccttt
     2461 aatcaccacc agcgaattca caatgtcgcg aagccctcaa gtcggcttca ggcagtatct
     2521 taaggcatgg tttcctgaga caaaataaag aattctgagt taatttgttt agaagaagga
     2581 agtcgggcag tgatcccagc atttgagagg cagaggcagg tatatctctg agtttgaggc
     2641 cagtctagtg cacagagtga gttctgggac agccaagggt acacagagaa accttgtctt
     2701 gaaaagcccc ccccccatag gatatttatc ttattctctt tcaaatgagt gctttctatc
     2761 tggtattcga tcacaaaggc aggataataa gaaccatata ttttatttac ttctagcttt
     2821 ttctttttta aaactatctt aaaatatatc tcattaaaaa tatatctcat ttttaaactt
     2881 tgtgttccac aatttgtgat tttcaagcac agagataata cctcctctac ttcattctag
     2941 cctatgcatt tcctcgttta tttaaagact gactgtaaga ctctcatcac ttttacttct
     3001 tgcctacagc tctctgcatt tactttgtcc ctgatacttt ttatgtggat agatgttttg
     3061 cctacgtgta tggacgagga ccacttaggt gccttgtatc tacagaagag gtcatcagac
     3121 tacagctgtc agccaccctg tgatggtgac atcctgagtc ctctggcaga gcagccagtg
     3181 ctctgaacta ctgagccatc tctctaagcc ctcacatttg tttttttttt tttaattttt
     3241 aattttaatt ttttggtttt ttgagacagg gtttctctgt gtagccctgg ctgtcctgga
     3301 actcactttg tagactaggc tggcctcgaa atcagaaatc cacctgcctc tgcctcccga
     3361 gtgctgggat taaagacgtg cgccaccacg cccggcaaca tttgtttttt aaaggtagtc
     3421 tagtattcag catatcactt atgtcccctc cccagggaaa agaaatccct tttagttatt
     3481 agtgtttctt cataaccttg aagatccatc taatttaagg acttttaact ttttgtttat
     3541 ttttaaatgg agtgtatttg tatatgtctg tacctgtgag tgcactggtt ctagaggaca
     3601 ggagagaaca ttggatcccc tagagctgac atgggtactg ggaattgaac ctgggtcctc
     3661 tgcaataacc actgagctat ctctccagcc tcaggacttt ttttctttac atgcttttaa
     3721 acctctgttg atcttattta aatgttttga gttagttggt gctatattgg tacaactatt
     3781 gaattccgtt gtaagaattt atactttaac accagcttat aggctcattg tgtgtttata
     3841 tttttcatag atagttatat tgatttctaa gtaagtttta cttcacccaa ataatcctta
     3901 aattagggac atactttccc ctcccccaag cttttaaggt tagaggtgtg tctgcagtgt
     3961 cacataccct aaacccacta atatcgtctt tatctaatat aactattggt ttattatctt
     4021 tacaaagcta attttgtgtg tgtgtgtgtg tatgtgtgaa acagagacag agcatatttt
     4081 tgtaactgtt cagttgtaca atcatgcccc ctcttagatg tgccttgtgc tgtacactga
     4141 cttgctaaac acattctggc tcttcagtga acagattgag accacagtca gaatttacta
     4201 caaatgcttg ttgactcatg gctgcaccag ggttatggac atatactccc atgaatttct
     4261 gtgtgtattc tggagatatg cattcaggtc cttgtgccag atggcaagta ctctgcttac
     4321 tgagccatct ctctaggccc agcatacaca cattttcatg aaataatctg aaagaaaatg
     4381 tggggaaact ttctattcta atatatagtt attggcccct aagggtacct atgatgtaga
     4441 aaagcagcct tcatctgggt ggggtggcac atacctgtaa acctagcatt tgggaagcag
     4501 agacagatct ttgtgagtcc aaggtcaact tggactacat agcaagttcc acgccagcca
     4561 tgtttaatca ctgtcttcaa aggaggtggg aaggtaggta tgacttaggt atttttttaa
     4621 agttacattt tatgtacatg tacaggaatc catggagatt acaagacagc ttgtgggagt
     4681 tggttctctc aaccaagtag atcctataga tcaaagtctg aagttgggtt gccaggcttg
     4741 gcaacaagtg ccttcacctg ctgagccata tcactggtct tcatttaata tttaaaaact
     4801 acccactcac atagggatat actgtgggac acactatgac atacaacagc tttctgtgat
     4861 gagatgtttt ctctgctttg ttgtttgcgt gtattgtgtt ttattttgga tgtgggggag
     4921 gttgcaaggg tgaagggtgg gtatggggac agggaaatga gtaggactga agtgcatgat
     4981 gtgaaacaac aaatcaataa aacgtttttt aaaatcta
//
