LOCUS       NM_001039115            2471 bp    mRNA    linear   ROD 06-AUG-2023
DEFINITION  Mus musculus zinc finger with KRAB and SCAN domains 4 (Zkscan4),
            mRNA.
ACCESSION   NM_001039115 XM_619080 XM_898585 XM_906721 XM_920020
VERSION     NM_001039115.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2471)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CJ065384.1, BU148250.1, AL589742.22 and AW060540.1.
            
            On Oct 19, 2011 this sequence version replaced NM_001039115.1.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR7652917.493243.1,
                                           SRR7345562.3180390.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-58                CJ065384.1         3-60
            59-824              BU148250.1         1-766
            825-2200            AL589742.22        28419-29794
            2201-2471           AW060540.1         1-271               c
FEATURES             Location/Qualifiers
     source          1..2471
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="13"
                     /map="13 7.82 cM"
     gene            1..2471
                     /gene="Zkscan4"
                     /gene_synonym="Gm11272"
                     /note="zinc finger with KRAB and SCAN domains 4"
                     /db_xref="GeneID:544922"
                     /db_xref="MGI:MGI:3649412"
     exon            1..661
                     /gene="Zkscan4"
                     /gene_synonym="Gm11272"
                     /inference="alignment:Splign:2.1.0"
     exon            662..818
                     /gene="Zkscan4"
                     /gene_synonym="Gm11272"
                     /inference="alignment:Splign:2.1.0"
     exon            819..2458
                     /gene="Zkscan4"
                     /gene_synonym="Gm11272"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gggttcccac aatgcttcca ccagagtctg gatgtagttt atttgccccg agcatccctt
       61 gagaatattg tgggtttagg gtggagtgca gaagactagg attgtaggtg acacctctgc
      121 agctgtgcct ttggtgaccc agagcacgag gggagggagg agatagatct agtctgaatt
      181 cccatcttgc gagaatcttc tgcagataca gcttgtagct agaggagcct ggagttggca
      241 cagaatggct agagaacccg gaacgtccgc agccctaaac gctcggtctg cagaagaggg
      301 cactgggctt ctagtggtga aagtggaaca ggaagaggcc tcccccttgg cagaggagac
      361 cagttggctg ggcagtcctg ggcctgaccg ctcccgccag cgcttccgtg ctttccgcta
      421 cccagaggca gccggacccc ggcaggcgct gagccggctc cgcgagctct gcagacagtg
      481 gctgcggcca gacatgcaca gcaaggagca gatcctggag ctgctggtgc tggagcagtt
      541 cctgaccatc ctgccagggg agctgcagac ctgggtgcgc gagcagcacc ccgacagcgg
      601 ggaggaggtg gtggcgctgc tggagtactt ggacaggcag ctggatgaca cacctccaca
      661 ggtttcaacg ggagaatgga gtcgcgaact tctctgctgc aaggtggcag tggtgacacc
      721 atcccaggac tcacaaagta gccactgcca ggcaatgaag tcactcttca agcacgaatc
      781 tcaggaatct ttggagtgtt cgcccttaca ggccagaggg ctggaaatga agcctgagac
      841 cagggacttg cctcgagctg aagaatacag ggaccaaaag cctgagcaga cagtgtgctt
      901 cctgggtgaa gacactgtcc cgattcctac aggtgcagaa gccagtgagc aggaaggcaa
      961 gttacagaca gcacagaaga gtgccacagg aaccaggcgg cacttttgct gtgaatgtgg
     1021 gaagagcttt gctcagagtt caggcttgac caaacacaag agaatccaca caggagagaa
     1081 gccctatgaa tgtgaagact gtgggaagac ctttattggg agctctgccc ttgtcattca
     1141 tcagagagtt cacactgggg agaagccata tgagtgtgaa gaatgtggca aagtcttcag
     1201 tcacagctcc aacctcatca agcaccagag aacccacact ggggaaaagc cctacgagtg
     1261 tgatgactgt gggaaaacct tcactcagag ctgcagcctc cttgaacatc acaaaattca
     1321 cactggggag aagccattcc agtgcaactt gtgtggcaaa gcctttaggc gtagctcaca
     1381 tctcctgaga catcagcgga tccatggtga taaaactgct ccaaagcctc tgcatggaga
     1441 ggcctgggaa ggtcagagtc cggtggcagg ccagggggaa gatgttgaag ctcctgagac
     1501 ttaccagtgc agtgagtgtg agagaagttt cactcggagg agaagccttc ttgaacataa
     1561 aaaaatccac acgggtgaga aaccctacca gtgtgatgca tgcgggaagg gctttacccg
     1621 aacttcatac cttgctcaac atcagaggag ccacgtgggg aaaaaattgt ctcacagtga
     1681 tctgtagcac acctgctggg gttggtgagc acttgccagt gagcggaaga cacctggagc
     1741 ccttactaac tgcagaagag agggtgtggc caatacacac tgtccagaat tagatgttat
     1801 agtttgaggt ggataatctt tcctgcttaa aaagtaactg gaatgagact tactaattga
     1861 ggatatggag gtggtctctg gatgagatcg cactgaagtg ttcccaccat ttggatttac
     1921 aaggacttcc agaaccgtca ctcgtagcca gcagttttct cctgaatgga tggttccgga
     1981 ttttggagtg tcccttcttt actctttgtc aatcggaatc ttttatgtct agtcagattc
     2041 ctgcggtctt agctacccta ttgtgccttg tgcatgggtg ctagaaaacc tttactccag
     2101 ggactgatga aatgttcttc aacactgaaa atctgggtct agctttctga agaagttcta
     2161 acgaggacca tttgtgtttg catctaattg gctaaggttc tagagtctgg ggcagcccta
     2221 cagttttcat attaagtaca cagtgttaca gagtttgagt agagagattc catttatctt
     2281 tatgcggata gagaatatga tgaagaatgc ctccagcaac ttctgaagat gtagggagac
     2341 attcctgtcc taaaaacctc cattagaaca tacttagttg ttgttgttgt tttttttaac
     2401 cttttactgt gaaagtttaa ctgaaaataa aaggcaatct tattttcatg agataaaaaa
     2461 aaaaaaaaaa a
//
