LOCUS       NM_001099323            7059 bp    mRNA    linear   ROD 05-AUG-2023
DEFINITION  Mus musculus zinc finger with KRAB and SCAN domains 16 (Zkscan16),
            transcript variant 2, mRNA.
ACCESSION   NM_001099323 XM_001476620
VERSION     NM_001099323.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 7059)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL805972.11 and AK032125.1.
            
            On Sep 20, 2017 this sequence version replaced NM_001099323.2.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: ERR3363658.3127338.1,
                                           ERR3363660.1763901.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849384, SAMN01164131
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-31                AL805972.11        74864-74894
            32-561              AL805972.11        77236-77765
            562-659             AL805972.11        80086-80183
            660-786             AL805972.11        83064-83190
            787-897             AL805972.11        83568-83678
            898-5757            AL805972.11        87695-92554
            5758-7059           AK032125.1         963-2264
FEATURES             Location/Qualifiers
     source          1..7059
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 32.36 cM"
     gene            1..7059
                     /gene="Zkscan16"
                     /gene_synonym="XM_143800; Zfp483"
                     /note="zinc finger with KRAB and SCAN domains 16"
                     /db_xref="GeneID:100041581"
                     /db_xref="MGI:MGI:3510405"
     exon            1..31
                     /gene="Zkscan16"
                     /gene_synonym="XM_143800; Zfp483"
                     /inference="alignment:Splign:2.1.0"
     exon            32..561
                     /gene="Zkscan16"
                     /gene_synonym="XM_143800; Zfp483"
                     /inference="alignment:Splign:2.1.0"
     CDS             159..2345
                     /gene="Zkscan16"
                     /gene_synonym="XM_143800; Zfp483"
                     /codon_start=1
                     /product="zinc finger protein 483"
                     /protein_id="NP_001092793.1"
                     /db_xref="CCDS:CCDS38771.1"
                     /db_xref="GeneID:100041581"
                     /db_xref="MGI:MGI:3510405"
                     /translation="MQGLVPSDMTTGPSALALSEQSRVPRVDTLRVQESMLRGNTDDL
                     ESFRQKFRWFCYSQEEGPRKTLNQLWELCKQWLRPDIHTKEQILELLVFEQFLRVLPG
                     EMRIWVNSQHPGSSVEVVTLVEDLNQTLEEKEDLSTQASAVCKEEDLGEDAMVVVVMA
                     SPDPEPRESVTFEDVSVDFSRGEWKLLEPSQRELYKEVLLENLGTLEFLGSPVSKLDL
                     ISHLKWVKLPRVLEKEILKDPRPGELVKESESRRELDAFMEGLTLEKTVEYCFRDGGY
                     GLKTEFQRRHGKPKKDHGKRSSHENRESETEGTSSGKRVKQTSDTLKHRKASLSKMSQ
                     RSKEGKKPFSFHSALVNRRELRREKSRKCGEPEKDPRRHLSPAERKRHPKIGSLSKTE
                     TCSKCGVAFTQILENCIESSQCEKCRKNLFQDEAPNQDKEPDPEEASKCGKCGKAFEP
                     GTKRSVCLECRKAPKASASPKPHNKADRKEKRYKCDECGKRFAELYFLTHHQRTHTGE
                     KPYVCKHCGRPFSDYSSFYQHQRIHTGEKPYTCKECGKSFTHSSSLSKHQRIHTGEKP
                     YKCNECGKAFRQNSCLTRHQKIHTGEKPFLCKDCGLSFRLFSSIMYHQRLHAGEKPYK
                     CTHCEKGFPSHSRLSRHLRCHTGAKPYKCKECGKTFRQSSSLNLHIRTHTGEKPYKCD
                     YCGAAFTRSTILIEHVKTHTNVQYECKKCGKTFKSRTTSLKHHCTQ"
     exon            562..659
                     /gene="Zkscan16"
                     /gene_synonym="XM_143800; Zfp483"
                     /inference="alignment:Splign:2.1.0"
     exon            660..786
                     /gene="Zkscan16"
                     /gene_synonym="XM_143800; Zfp483"
                     /inference="alignment:Splign:2.1.0"
     exon            787..897
                     /gene="Zkscan16"
                     /gene_synonym="XM_143800; Zfp483"
                     /inference="alignment:Splign:2.1.0"
     exon            898..7059
                     /gene="Zkscan16"
                     /gene_synonym="XM_143800; Zfp483"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcggtgcagc tggctgcgga tgctggtgca gttccttcaa gactgtaatt tggattcctg
       61 gagcctttgg tagtttgccg tgcatagata gtacctgttg gcagatccca ctgatactca
      121 gatagcctaa agaggactgg attcctgctg ctgatacgat gcaaggttta gtgccctcag
      181 acatgacgac aggcccctca gctttggctt tgagtgaaca gagcagggtc cccagagtgg
      241 atactctgag ggtccaggag agtatgttaa gaggaaatac tgatgacctg gagtctttca
      301 ggcagaagtt caggtggttt tgttactcgc aggaagaagg acccagaaaa accctgaatc
      361 aactctggga actctgcaag cagtggctga gaccagacat tcacaccaaa gagcagatct
      421 tagagctgtt agtgtttgag cagttcctga gggttctgcc tggagagatg aggatttggg
      481 tgaattctca gcatcctggg agtagtgtgg aggtggtgac cctggtagaa gacttgaacc
      541 aaacacttga agaaaaggaa gatctcagca ctcaggcttc cgcagtttgc aaagaggagg
      601 atttgggaga agatgcaatg gtggtggtgg tgatggcgtc accagatcct gagccacgtg
      661 aatctgtaac atttgaggat gtgtctgtgg atttctccag aggagagtgg aagctactgg
      721 aaccatctca aagagagcta tataaggaag tgctgctgga aaacttaggg accctagagt
      781 ttttgggctc tccggtttcc aaacttgact tgatttccca tctgaagtgg gttaaattgc
      841 caagggtact ggaaaaagaa atcttaaaag accccagacc aggagagttg gtaaaagaga
      901 gtgagtctag acgtgaattg gatgctttta tggaaggctt gactttagag aaaacagtgg
      961 agtactgctt cagggatggt ggttatggct tgaagacaga attccagagg cgacatggca
     1021 aacccaagaa agatcatggc aagcggagta gccatgagaa tagagaatct gagacagaag
     1081 ggacctcctc tgggaagaga gtcaagcaga cttctgacac actcaaacat cggaaagcct
     1141 ccttatctaa gatgtctcag aggtccaagg aaggcaagaa gcccttcagc tttcattcag
     1201 ctctcgtaaa ccgcagagag ctcaggaggg aaaagtcgag gaaatgcggt gaacccgaga
     1261 aggacccacg tcgccatcta tctcctgctg aacgcaagag acatcccaaa attggttcct
     1321 tgagtaagac cgagacgtgt agtaagtgtg gggtagcctt tactcaaatc ttagagaatt
     1381 gcattgagag ctctcagtgt gaaaaatgcc ggaagaattt gtttcaagat gaggccccaa
     1441 atcaagacaa ggagcctgat cctgaagaag ccagtaagtg cgggaagtgt ggcaaggcct
     1501 ttgagcctgg tacgaagcgc tccgtgtgtc tcgagtgtag aaaggccccc aaagctagcg
     1561 cctcacccaa gccacacaac aaagctgacc ggaaagaaaa gcgttacaag tgcgacgaat
     1621 gtgggaagcg tttcgccgag ttatactttc tcactcacca tcaaagaacc cacactggag
     1681 agaagcccta cgtgtgtaaa cactgtggga gacctttcag cgactactcg tcattttatc
     1741 aacaccagag gattcacact ggagagaaac catatacatg taaggagtgt gggaaatcct
     1801 tcactcacag ctcctctctt tcaaaacatc agaggataca caccggagag aagccctata
     1861 agtgtaacga gtgcggaaaa gcctttagac aaaattcttg ccttactcga catcagaaga
     1921 tccacactgg agaaaaacca tttttgtgta aggactgtgg actgtctttc cgcctcttta
     1981 gtagtatcat gtatcatcaa agactccatg cgggagagaa gccctacaaa tgtacacact
     2041 gtgagaaagg tttcccctct cattcccgcc tcagtcggca tttgaggtgc cacactggtg
     2101 cgaaaccata caaatgcaaa gaatgtggga aaactttcag acagagttcg tcgcttaatt
     2161 tacacatccg aactcataca ggagagaaac cctacaaatg tgattactgt ggagcggcct
     2221 ttacccggag cacaatcctc attgaacatg tcaaaactca cactaacgta caatacgaat
     2281 gtaagaagtg tggtaagaca tttaaaagcc gtacgaccag tcttaaacat cactgtacac
     2341 agtaatcctg gggatggagg atgggggagg ggtggttaat tcagatcgtg tgcttattta
     2401 aaagctcgaa tgataaacta cccactgcat tgattagaag cttcagcctc aatgggttcc
     2461 caaccaggaa tagacttctt cccctttggt cctcttcttg agggtggtca gttttgatta
     2521 aacctggtaa agtcatgttg acgtgaagaa agctgtgatg tgaaacgatt ctgagaagcc
     2581 aaacttaagt ttccttcaag gaattctcct tttggtctcc ctttcactgc catactggaa
     2641 aagaccatac ctggactctc ataacctggg ttctaaccca gtttgccagc caaccactgt
     2701 gtcaccttaa acaagtcatt tggaccctct gaatattatt ttctttacca gtagagttga
     2761 agagatgaag acttctaagt ttccttttta tttgatacta tgatactgca gaaatagttt
     2821 gagcattttt aactcattgg aattgttgca cccagtagat aagtcccttc ttacaggtta
     2881 gtgaacttct agattagtga gaacgtggga tgtttggtgt gggatcctag aatgtgatga
     2941 acagaacata ccaaggaagt tccatgaagt atgctttcag agaatgttct aatttttgca
     3001 caagtcacct caacctcttt tgagttttgc ctcagtgggt tgaaaatcca gagagcttgt
     3061 acctgagcta gctcagtcct aatggtaatg gacctaggag agaaaccaaa actagctgtt
     3121 tagggtggat tacttccctg cagtgagccc agcctcctgc acctctgtaa aaattctgta
     3181 tgacaaaagt cacaggatgt caggttgaat cagattgggg ccttagactg ttttttagtt
     3241 gtggagtgga atatgtatac acatacaaag ctttcactac ttagaaatac ggaatctcat
     3301 gtgttgaaga aagtagagtt tgtcttttca aatgtacaag agctgacgac attagtctat
     3361 tatttccaca agtgctcagc tggtcctggg tcgtggttgc cactttagat gccatgtttc
     3421 tcttatagct ggctttctta tggcaggcat gtgatttttt ttttcttttt gttatcatgc
     3481 cctttggatg atacatacac taaaatctca agggacgcca ttgataagaa gtgaaagtca
     3541 ggaaaagaac acttaaataa gttgtagttg atagattctt ttgtgaagtg agtcttcagt
     3601 ggaatggact atacgggtat tgatggatat tcctaaaatt tgtcgcagat ggaatcttaa
     3661 tttctaactg gaaaaggaat taaagactgt gaatgagcta ttttgggtct cacatcatta
     3721 gattccagaa gggcctgatt attgtaaata agttcctaaa gttgaaattg gaggcaattg
     3781 ctcataaagg gagctaaagc aggactctgg ccttatgggc atgatgggtc tatagtgttg
     3841 atctgacgtt caggaatatc aggaatattt gctaatgtaa tgtgcttagg tctgaaatgc
     3901 tacttctgga tataaggtgg gtccttctgg gtggttctta ctaaagccct aaagaatcag
     3961 acattgcttc atgataaact gatcagtaaa cagaccaagt aaacacattc ctgacaccaa
     4021 aggaacatgg cttatgtgaa cctttcacat gggcttaagg attttctgaa acagtatatt
     4081 ttattgaagt agttaatgaa gtacataaaa ccactcttga gagttgttcc agaatgttct
     4141 aggggatttt acaagaggat ggttttatcc caatctcagt tggggattag aatcaaaacc
     4201 tcatttaaat tttattaaaa tatagaatac atgtgcttaa aaccaaggtt tgctatttgt
     4261 atgagttttc atcagtttta ctgaagtaca cattcattac cataatccgt ttttcagaac
     4321 atcaccctaa taagagtagc cattggatac acccatttat acataattct tggtctcatc
     4381 tctgacccca ggtaaccact aaccttgtat taacagaata gccttttcta gtcattttat
     4441 attggccttt atttccttat taccatcgtg gttttaggtt tatgcacgtt ctagcctatg
     4501 tgatttctta ctattaagat gttatatgtc agtattgatt atcgttaaat aatattctat
     4561 tatatgatac ttcgcccatg tacctatgag aggacattct cttctttctc cttaggtggt
     4621 tggctgttag gaacaacact gtgaatgtaa tgtgtaagtc tgtgtagaca ataattttaa
     4681 ttgttttgct cagtagacat ctatgggtaa agtttctggg tcatgtaaat ttttgtttag
     4741 ctatgtagga aaccgccaca ttgctgtcca gtgtgactac atccttttaa attctggcag
     4801 cagcatgtga aggctccatt ttctttacac ctgggccaat ctttaaaaaa atgttagtca
     4861 ctctgatgag gggcattttt atttgctttt aatttgcatc tccctgatga ctgacgtcat
     4921 catctgcctt tcatatatct ccttggagtt ttttcagatt ccttatccaa ttaaaagtca
     4981 ggctagttga gttataataa gttctttatg tccatacaac ccctcatcca atatgagctt
     5041 tctatcactg tgtactagag ggaaacttta acccctactg caaaatattt atcaatagct
     5101 aataaattgc acaaaagcta ttcagtctgt cccagcaccc atgtacttaa gtcaattttg
     5161 agattgtcag tgcatctaag gatttttaat ttatggtttg tgactcctca tagaatttct
     5221 tcttaaagct tcatttagca tttttgtctg tttataatga taaggatttt aatcatctat
     5281 agttttagac gaagtcctca ctctttagaa tgtttcacag tgagtttcca tatagagatt
     5341 tctttcccat catggaacaa ccaagcatct gccagtgagt taacttttat tctttttact
     5401 ttagacataa aatatgtgtg ctataaaatg agccatctct gttgctttta ggttgttccg
     5461 ttctgtggtg tccatgtgtg aacttatcgc tcatttccgt cctcccacac tcacctcatt
     5521 ggagattggc tctccgtcct catctctccc agccatcaca gttccatttc cttccctcac
     5581 ctggctcttg tccattcatt cgtcacacat atagaagaca atacttggct tatctcactt
     5641 gggtagacca ttggaggcgt tcaaggacat cttcaggtgg acttcctagt gcagagtaca
     5701 tgtcccctgt gtcactggtc ccacaaacta atcacctgcc cattcacact gaagaacctg
     5761 agactatgta cctgcctcct cttaggagtc tgctttagca aactgagtaa gaatgctttc
     5821 agcatgaatc acacactgta accaagtaat gagaaagaaa aaaaaagccc tattatctct
     5881 tactttaaaa ggacgaccca tctggtcttt aaactcagct acaattctat cttcttgaaa
     5941 gaaatgaatc tttctgctta gctggaattc cttaacagac gaaaagcttt tctaataatt
     6001 cagatgtctg agacttgagg caatgaattg gcttctcttt gtaaatgtag gcgttctttg
     6061 agacatcatc agagttttcc ctgggcaacg tcttacacag atcatctaaa actaaaaatg
     6121 tacttgaaat ttttcaaatt ttgagtcaac tgattttcga tgatagaaat aagtgtatat
     6181 attctgtgag aaatatgtaa tttgctcgtg ttgaccctga gcagaattgc tcggtggtgt
     6241 ggtgtttcct gtttccgtgg gtatctttcc gacaatcgtt tctccagtga tttgagtaga
     6301 gtgcaatact tggctttact ttcatctgat ctgtggttct ctttgcgcgt gtgcgcatgt
     6361 gcaaggggca agctgccgta taactggcac acttagaatc cgaaacctgc taaaaaaaaa
     6421 gtcgcttaag gtattttggt tagaaattta gatttcattt tgctggtttt ttgtggaatt
     6481 ttcttttgac taagttgctg aagaacgacg tagatctgaa acaccgtctt cagtgttgcc
     6541 tactgtgtta tcttcaatac ttgaactctg tgtctgctgc tactgccgcc gctgctgctg
     6601 ctgctgctac tgtaaattgc aactggcatt catcagtgaa tgtgcattgg accctcttcc
     6661 agtcccttct ttccctacgg ggacacctac agtatgagct tctgtgtctg cactgaatcc
     6721 tgccttagag atatgccttt gacgaaactt taaatatttt tcatgtattt ttacctatag
     6781 aatactcatg actccagtaa gaagcacttt gatttatggt tatgaactgt acaggtaaca
     6841 cctcactgtg ctatttgcct agcgtgttga tataatcctt tatgatatcc catctgtgca
     6901 gagacaaatg tcatttgtcg gtttgtcaat gctgactaga ttggtgacgt atttgtgtat
     6961 cactgaagag cgcacctctt ctgcagtgtt aagagcaccc tgtatggtgc ggtagttaaa
     7021 gtgaatcaca gctaaacaat aaagttgtat ttaatgaag
//
