LOCUS       NM_011769               3528 bp    mRNA    linear   ROD 09-MAR-2022
DEFINITION  Mus musculus zinc finger, imprinted 1 (Zim1), mRNA.
ACCESSION   NM_011769
VERSION     NM_011769.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3528)
  AUTHORS   Jiang W, Shi J, Zhao J, Wang Q, Cong D, Chen F, Zhang Y, Liu Y,
            Zhao J, Chen Q, Gu L, Zhou W, Wang C, Fang Z, Geng S, Xie W, Chen
            LN, Yang Y, Bai Y, Lin H and Li X.
  TITLE     ZFP57 dictates allelic expression switch of target imprinted genes
  JOURNAL   Proc Natl Acad Sci U S A 118 (5) (2021)
   PUBMED   33500348
REFERENCE   2  (bases 1 to 3528)
  AUTHORS   Roome RB, Bourojeni FB, Mona B, Rastegar-Pouyani S, Blain R,
            Dumouchel A, Salesse C, Thompson WS, Brookbank M, Gitton Y,
            Tessarollo L, Goulding M, Johnson JE, Kmita M, Chedotal A and Kania
            A.
  TITLE     Phox2a Defines a Developmental Origin of the Anterolateral System
            in Mice and Humans
  JOURNAL   Cell Rep 33 (8), 108425 (2020)
   PUBMED   33238113
REFERENCE   3  (bases 1 to 3528)
  AUTHORS   Bretz CL and Kim J.
  TITLE     Trans-allelic mutational effects at the Peg3 imprinted locus
  JOURNAL   PLoS One 13 (10), e0206112 (2018)
   PUBMED   30335829
  REMARK    Publication Status: Online-Only
REFERENCE   4  (bases 1 to 3528)
  AUTHORS   Denizot AL, Besson V, Correra RM, Mazzola A, Lopes I, Courbard JR,
            Marazzi G and Sassoon DA.
  TITLE     A Novel Mutant Allele of Pw1/Peg3 Does Not Affect Maternal Behavior
            or Nursing Behavior
  JOURNAL   PLoS Genet 12 (5), e1006053 (2016)
   PUBMED   27187722
  REMARK    Publication Status: Online-Only
REFERENCE   5  (bases 1 to 3528)
  AUTHORS   Yamaguchi S, Shen L, Liu Y, Sendler D and Zhang Y.
  TITLE     Role of Tet1 in erasure of genomic imprinting
  JOURNAL   Nature 504 (7480), 460-464 (2013)
   PUBMED   24291790
REFERENCE   6  (bases 1 to 3528)
  AUTHORS   Monk D, Smith R, Arnaud P, Preece MA, Stanier P, Beechey CV, Peters
            J, Kelsey G and Moore GE.
  TITLE     Imprinted methylation profiles for proximal mouse chromosomes 11
            and 7 as revealed by methylation-sensitive representational
            difference analysis
  JOURNAL   Mamm Genome 14 (12), 805-816 (2003)
   PUBMED   14724735
REFERENCE   7  (bases 1 to 3528)
  AUTHORS   Choi JD, Underkoffler LA, Collins JN, Marchegiani SM, Terry NA,
            Beechey CV and Oakey RJ.
  TITLE     Microarray expression profiling of tissues from mice with
            uniparental duplications of chromosomes 7 and 11 to identify
            imprinted genes
  JOURNAL   Mamm Genome 12 (10), 758-764 (2001)
   PUBMED   11668390
REFERENCE   8  (bases 1 to 3528)
  AUTHORS   Kim J, Bergmann A, Wehri E, Lu X and Stubbs L.
  TITLE     Imprinting and evolution of two Kruppel-type zinc-finger genes,
            ZIM3 and ZNF264, located in the PEG3/USP29 imprinted domain
  JOURNAL   Genomics 77 (1-2), 91-98 (2001)
   PUBMED   11543637
REFERENCE   9  (bases 1 to 3528)
  AUTHORS   Kim J, Noskov VN, Lu X, Bergmann A, Ren X, Warth T, Richardson P,
            Kouprina N and Stubbs L.
  TITLE     Discovery of a novel, paternally expressed ubiquitin-specific
            processing protease gene through comparative analysis of an
            imprinted region of mouse chromosome 7 and human chromosome 19q13.4
  JOURNAL   Genome Res 10 (8), 1138-1147 (2000)
   PUBMED   10958632
REFERENCE   10 (bases 1 to 3528)
  AUTHORS   Kim J, Lu X and Stubbs L.
  TITLE     Zim1, a maternally expressed mouse Kruppel-type zinc-finger gene
            located in proximal chromosome 7
  JOURNAL   Hum Mol Genet 8 (5), 847-854 (1999)
   PUBMED   10196374
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC066196.1, AK086590.1 and CD349354.1.
            
            On Jun 30, 2009 this sequence version replaced NM_011769.3.
            
            Publication Note:  This RefSeq record includes a subset of the
            publications that are available for this gene. Please see the Gene
            record to access additional publications.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC066196.1, AK086590.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849374,
                                           SAMN00849375 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1254              BC066196.1         1-1254
            1255-2720           AK086590.1         1274-2739
            2721-2954           BC066196.1         2721-2954
            2955-3296           CD349354.1         132-473
            3297-3528           BC066196.1         3297-3528
FEATURES             Location/Qualifiers
     source          1..3528
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 3.87 cM"
     gene            1..3528
                     /gene="Zim1"
                     /note="zinc finger, imprinted 1"
                     /db_xref="GeneID:22776"
                     /db_xref="MGI:MGI:1341879"
     exon            1..64
                     /gene="Zim1"
                     /inference="alignment:Splign:2.1.0"
     exon            65..187
                     /gene="Zim1"
                     /inference="alignment:Splign:2.1.0"
     exon            188..264
                     /gene="Zim1"
                     /inference="alignment:Splign:2.1.0"
     exon            265..330
                     /gene="Zim1"
                     /inference="alignment:Splign:2.1.0"
     CDS             282..2021
                     /gene="Zim1"
                     /codon_start=1
                     /product="zinc finger, imprinted 1"
                     /protein_id="NP_035899.4"
                     /db_xref="CCDS:CCDS20782.1"
                     /db_xref="GeneID:22776"
                     /db_xref="MGI:MGI:1341879"
                     /translation="MKRSVSEVKTKAPVNEASPSPSPDQTANQLSEKKRRIPITSLPT
                     WYKEPVIFKDVAVYFSQKEWQLLEPAQKDLYKDVMLENYENLISVEYYIFKPKLITRL
                     EQGVDLFAKENDVPGDPQQGEAGVSRSDTSAGKKTGDNSTKAEIRKPDNSKTTSLEKQ
                     KAADQGRGSQSLRAEKTSKSDDRPSQNKEKCASTSTTEASKTSIPGNKENESAIPGTS
                     SGQTSAATTTPQSAPSEKPTSGKDVEGKPQTMRSSSTNPKRKPARQGKNHFKCKECGK
                     TFNQTLHLVEHERIHTGEKPHKCDTCGKSFRHLSYFLTHYRIHTGVRPYKCKECGKAF
                     NSSSTLNNHCRIHSGEKPFKCDECGKTFKQSTKLTRHQRIHTGEKPYKCGECNKCFGR
                     SSSLREHKRIHTGEKPYCCQVCGKTFRVNSHLSEHQRLHLKVKPYKCDKCGKHFRNSS
                     YLTEHKQIHVPGARVDCPECGKVFACKVALLKHQKRHEANSRYRCKGCGKTFRCKSSI
                     QRHERLHAGEKPFVCHKCDKGFTDKTTLNNHLKIHSGDRPDPCAQCGRTFKKLATLLI
                     HQKKHIKKKPTDV"
     exon            331..422
                     /gene="Zim1"
                     /inference="alignment:Splign:2.1.0"
     exon            423..549
                     /gene="Zim1"
                     /inference="alignment:Splign:2.1.0"
     exon            550..681
                     /gene="Zim1"
                     /inference="alignment:Splign:2.1.0"
     exon            682..3501
                     /gene="Zim1"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gccgcaggct gcggtgcctg gaggcgagtg cggacggacg gataaccaag cgcgaggacg
       61 agaggtcttt ggacaactca caacagcctg ttttttccta ctatgtgggt cccagcgatg
      121 gaactcgagt tataaggctt ggcagcaatc gcctttacca gctgaaccag ctagctggtc
      181 ccagattaag tttgttccct gtgcctacaa ataggatcat cacaaatgcc gataactcca
      241 gctccagggc atccgacatc accatatttc attctctcac catgaagagg agtgtctcag
      301 aggtgaagac taaagcccca gttaatgaag cctcaccttc accaagtcct gatcagacag
      361 caaaccagct ctctgaaaag aagcgaagaa ttccgatcac gtcgttgcca acctggtaca
      421 aggaaccagt gatcttcaaa gatgtagctg tgtacttcag ccagaaagag tggcagctac
      481 tggagcctgc tcagaaggac ctgtacaagg atgtgatgct ggagaactac gagaacctga
      541 tctctgtgga atattatatt ttcaagccaa agttgatcac caggttggag caaggagttg
      601 acctttttgc caaagagaac gatgttcctg gagaccccca gcaaggtgag gcaggagtca
      661 gcagaagtga cacctctgca gggaagaaga caggggataa ttccacaaag gcagaaatcc
      721 ggaagccaga caattctaag acaacatcac tggagaagca gaaggcggca gatcaaggcc
      781 gtggttccca gagtttgaga gcagaaaaga cctcaaaaag tgatgacagg ccatctcaaa
      841 ataaggagaa atgtgcctca acttcgacta cagaagcaag caaaaccagc ataccgggca
      901 ataaggagaa tgaatctgca attccaggca catcttcggg tcaaacatca gcagcaacta
      961 caacaccaca gagcgctcct tcggaaaagc cgacctcggg gaaagatgtt gagggaaaac
     1021 cacagaccat gaggagcagt tccacaaatc caaagcgcaa gcctgcccga caaggtaaaa
     1081 accactttaa atgcaaggaa tgcgggaaaa ccttcaacca gaccctccac ctcgtggaac
     1141 atgagcgaat tcacacagga gagaaacccc acaagtgtga cacgtgcggc aaatctttcc
     1201 ggcacctctc atacttcctc acacactacc gaattcacac gggagtgaga ccctacaagt
     1261 gtaaggagtg tggcaaagcc ttcaacagca gctccactct caacaatcac tgcaggatcc
     1321 actcagggga gaaacccttt aaatgtgacg agtgcgggaa aaccttcaag cagagcacaa
     1381 agctcacccg tcaccagcgg attcataccg gggagaagcc ctacaagtgt ggagagtgta
     1441 acaagtgctt cggccgcagc tcatccctga gggagcacaa gaggatccat accggagaga
     1501 agccgtactg ctgtcaggtg tgtgggaaga ccttcagggt caactcacat ctttcggagc
     1561 atcagcggct ccatttaaag gtgaagccgt acaagtgtga caagtgcgga aaacacttcc
     1621 gaaacagctc gtacttgacg gagcacaagc agatccatgt gcctggggcc cgagtggact
     1681 gcccggagtg tgggaaagtc ttcgcttgca aagtagccct tctcaagcac cagaagagac
     1741 acgaggcaaa ctccaggtac cggtgcaagg ggtgtggaaa gactttcaga tgtaagtcaa
     1801 gcatccaaag gcatgagagg ctgcacgctg gggagaaacc tttcgtgtgc cacaagtgtg
     1861 acaaaggttt cactgacaaa actacattga ataatcactt gaaaatccac tctggagata
     1921 ggccagatcc atgcgcccag tgcgggagaa cctttaaaaa actggctacc ctgctgattc
     1981 accagaaaaa gcatattaaa aagaagccca cagatgtata aaagaccttt aaaagccaga
     2041 actcacattt gggtctttgg gacaaagtca aaacaagaga aacgagacac acatgaacag
     2101 ttccttcatt tcttagtagc tgtttttcag taagccagca gttttctaga aatgactgtt
     2161 tttgtaaccc ttcccctact tggagcattt gtgcaatata aacaaacatt tttgttgttg
     2221 ttgttactat tccaacagac aggtactact atcaactgca tctgtggata gaggcaaagg
     2281 atgatgtcaa acatcctaca gtgtactaaa cagactccct tgccttccaa taactaagga
     2341 agatctggtt ggcatgcaaa tttgaggaat tcaggtggac ttttctctgc cagccactac
     2401 agtaaccact aatgagacat ggccgtttaa atatcaacgt taaatagcaa cgtgtggtaa
     2461 acacttaaat gtagacactt ggatgaatca ttgacattcc cagtcttcat tggctagtga
     2521 gcctcactac agctaacatt ttcaacacca tggaagattc tgtttagaac tgatgtgaat
     2581 gaccaataat cccttcatgg ggtgactcca aggaaaatag gacacagctt tgtgaaactg
     2641 aatctatctg tgctttttta aaaaaatttt tttaacagca taatgtagca ttttgtaagg
     2701 tttgtgaatg tgctggagcc tgtgatgttt ggagcacttt cagaactccg actggccagt
     2761 gcccacccgc aggactccta cccctacgtt cggtgggtta aaataatgtc tttgataact
     2821 gtgagcattt gttgatcgct atctacctat caagcatggt gctgaactct ttatgtgaat
     2881 tatcagagct aatttttacc atattcctat gagataagaa ctgttatgta cctaattttc
     2941 tgttgagaaa atcaaggctt ttcttttagt atgttctcct cctcctcctt cttttccttc
     3001 ttctcctttc tcttcttctt tgattattcc tattcttatt cttcccaaag gactcctacc
     3061 tttattgtgc tttgggcaga atgatcagta ggtaactaac agtatcactg atgcatttga
     3121 gtgtttattg gtgtctttct acctatcaaa tatggtgcca aaatcattac atgaactata
     3181 tcagttaatg aattctacca atcatatgaa ataagtatta tgtacctaat tttcatttta
     3241 tttcctttta tttcccttta ctttttgagg cagagtctca ctgtgtagcc cagactagcc
     3301 tcaaacttgt gacattctcc tgccccggct ttttcagagc tgggatgaca ggtgtgagcc
     3361 accatgccca gctgagctgc tttgtaacga tgggttattt acaagtttgc acttaaagac
     3421 tacattgcta ttttttatgt tgcactcttt caaatagata agatttatta tatgttagca
     3481 taaaatatgt ttttaaatgt gaaaaaaaaa aaaaaaaaaa aaaaaaaa
//
