LOCUS       NM_001371348            4421 bp    mRNA    linear   ROD 02-MAY-2024
DEFINITION  Mus musculus zinc finger protein 982 (Zfp982), transcript variant
            3, mRNA.
ACCESSION   NM_001371348
VERSION     NM_001371348.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 4421)
  AUTHORS   Dehghanian,F., Bovio,P.P., Gather,F., Probst,S., Naghsh-Nilchi,A.
            and Vogel,T.
  TITLE     ZFP982 confers mouse embryonic stem cell characteristics by
            regulating expression of Nanog, Zfp42, and Dppa3
  JOURNAL   Biochim Biophys Acta Mol Cell Res 1871 (4), 119686 (2024)
   PUBMED   38342310
  REMARK    GeneRIF: ZFP982 confers mouse embryonic stem cell characteristics
            by regulating expression of Nanog, Zfp42, and Dppa3.
REFERENCE   2  (bases 1 to 4421)
  AUTHORS   Dietrich,J.E., Panavaite,L., Gunther,S., Wennekamp,S., Groner,A.C.,
            Pigge,A., Salvenmoser,S., Trono,D., Hufnagel,L. and Hiiragi,T.
  TITLE     Venus trap in the mouse embryo reveals distinct molecular dynamics
            underlying specification of first embryonic lineages
  JOURNAL   EMBO Rep 16 (8), 1005-1021 (2015)
   PUBMED   26142281
REFERENCE   3  (bases 1 to 4421)
  AUTHORS   Sharov,A.A., Piao,Y., Matoba,R., Dudekula,D.B., Qian,Y.,
            VanBuren,V., Falco,G., Martin,P.R., Stagg,C.A., Bassey,U.C.,
            Wang,Y., Carter,M.G., Hamatani,T., Aiba,K., Akutsu,H., Sharova,L.,
            Tanaka,T.S., Kimber,W.L., Yoshikawa,T., Jaradat,S.A., Pantano,S.,
            Nagaraja,R., Boheler,K.R., Taub,D., Hodes,R.J., Longo,D.L.,
            Schlessinger,D., Keller,J., Klotz,E., Kelsoe,G., Umezawa,A.,
            Vescovi,A.L., Rossant,J., Kunath,T., Hogan,B.L., Curci,A.,
            D'Urso,M., Kelso,J., Hide,W. and Ko,M.S.
  TITLE     Transcriptome analysis of mouse stem cells and early embryos
  JOURNAL   PLoS Biol 1 (3), E74 (2003)
   PUBMED   14691545
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL626778.12.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR17784647.1014173.1,
                                           SRR13422598.1345192.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849375, SAMN00849381
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-426               AL626778.12        50780-51205
            427-519             AL626778.12        59380-59472
            520-574             AL626778.12        115252-115306
            575-701             AL626778.12        118419-118545
            702-4421            AL626778.12        120011-123730
FEATURES             Location/Qualifiers
     source          1..4421
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4 78.5 cM"
     gene            1..4421
                     /gene="Zfp982"
                     /gene_synonym="Gm13152"
                     /note="zinc finger protein 982"
                     /db_xref="GeneID:195531"
                     /db_xref="MGI:MGI:3701121"
     exon            1..426
                     /gene="Zfp982"
                     /gene_synonym="Gm13152"
                     /inference="alignment:Splign:2.1.0"
     exon            427..519
                     /gene="Zfp982"
                     /gene_synonym="Gm13152"
                     /inference="alignment:Splign:2.1.0"
     exon            520..574
                     /gene="Zfp982"
                     /gene_synonym="Gm13152"
                     /inference="alignment:Splign:2.1.0"
     CDS             545..1651
                     /gene="Zfp982"
                     /gene_synonym="Gm13152"
                     /codon_start=1
                     /product="uncharacterized protein LOC195531"
                     /protein_id="NP_001358277.1"
                     /db_xref="CCDS:CCDS84824.1"
                     /db_xref="GeneID:195531"
                     /db_xref="MGI:MGI:3701121"
                     /translation="MSVFLVNTPQGLLTFKDVAVEFSLEEWERLSFAQRSLYIDVMLE
                     NYNNLLFVENHFICAKCGKALDEDSQYIVHEHMNIQEKSSKWNKLSNVILESPHCVPH
                     KCSEWDKCFSQRSHLSIHQKIHTGEKPYKCSECDKCFTEKGILRIHQKIHSGEKSYKY
                     HECDKCFPKKSHLSIHLRIHKGEKPYKCSDCDKCFTEKRKLRRHQKIHTGEKPYKCSE
                     CDKCFIQKYSLSDHQRIHTGEKPYKCSECNKCFIQKSSLNNHQSIHTGEKPYKCSECD
                     KCFTDKRNLRRHQKIHTGEKPYKCSECEKCFTDKGSLRRHQKIHTGEKPYKCSECEKC
                     YTDKGSLRRHQKIHKGEKLTNAVNVTNALLKKAI"
     exon            575..701
                     /gene="Zfp982"
                     /gene_synonym="Gm13152"
                     /inference="alignment:Splign:2.1.0"
     exon            702..4421
                     /gene="Zfp982"
                     /gene_synonym="Gm13152"
                     /inference="alignment:Splign:2.1.0"
     regulatory      4402..4407
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zfp982"
                     /gene_synonym="Gm13152"
                     /note="hexamer: AATAAA"
     polyA_site      4421
                     /gene="Zfp982"
                     /gene_synonym="Gm13152"
                     /note="major polyA site"
ORIGIN      
        1 tcgagcgggc ccccacttct cggcccgacc cagacccttc tgcgcctccc ttggcctttg
       61 tccggctcca ggaggccggc cccgcgcccc ctggcagccg ccggtgcccg agcacgcatc
      121 agcctcctgg ctacatacgc gagctcgggg aatctgtggc ctccgtgacc cctctcccca
      181 gcccgccttg ttgtggagcc cggcggggcg gcgactgcca gggccgggtt tgcggcgctc
      241 aggagaggcc ccggctccgc cccgggcctg cacaggggga gagcggagcg gtcagcagcc
      301 gggtcgggtc ggggcccctc ccgagaggag agtgaagcgg cagcggcggc agaaaagatg
      361 gaagaactgc atagcctgga cccacgaagg caggaattac tagaggccag gttcactgga
      421 gttggtgtat tcatatgctc agccaaatgt gcataactgt aaatcaacac taagggcacc
      481 tgatggttaa ggtcaaggag attctcgcga aggatccaga gaccctggga gaaggacaac
      541 aagaatgagt gtgtttctgg taaatacacc acagggtctg ttaaccttca aggatgtggc
      601 cgtggaattc tcactggagg aatgggaacg tctcagtttt gctcagaggt cattgtacat
      661 agatgtgatg ttggagaatt acaacaatct gttgtttgtg gaaaatcatt tcatatgtgc
      721 aaagtgtggg aaggccttgg atgaagacag ccagtacatt gtccatgaac acatgaatat
      781 tcaagagaag tcttctaaat ggaacaagct tagcaatgtt attcttgaat ccccccattg
      841 tgtacctcac aaatgtagtg aatgggacaa atgcttttcc caaagatccc atcttagtat
      901 tcatcagaaa attcatacag gagagaaacc ttacaaatgc agtgaatgtg acaaatgctt
      961 tactgaaaaa ggcatactga gaattcatca gaaaattcat tcaggagaga aatcttacaa
     1021 atatcatgaa tgtgacaagt gctttcccaa aaaatcccat cttagtattc atctgagaat
     1081 tcataaagga gagaaaccct acaaatgtag tgactgtgac aaatgcttta ctgaaaaacg
     1141 caaactgaga aggcatcaga aaattcatac aggagaaaaa ccttacaaat gtagtgaatg
     1201 tgacaaatgc tttatacaaa aatacagtct tagtgatcat cagagaattc atacaggaga
     1261 gaaaccttac aaatgtagtg aatgtaacaa atgctttata caaaaatcca gtcttaataa
     1321 tcatcagagt attcatacag gagagaaacc ttacaaatgt agtgaatgtg acaaatgctt
     1381 tactgataaa cgcaatctga gaaggcatca gaaaattcat acaggagaga aaccttacaa
     1441 atgtagtgaa tgtgagaaat gctttactga caaaggcagt ctgagaaggc atcagaaaat
     1501 tcatacagga gagaaacctt acaaatgtag tgaatgtgag aaatgctata ctgacaaagg
     1561 cagtctgaga aggcatcaga aaattcataa aggagagaaa cttacaaatg cagtgaatgt
     1621 gacaaatgct ttactgaaaa aggcaatctg agaattcatc agaaaattca ttcaggagag
     1681 aaaccttaca aatgtcatga atgtgacaag tgctttccca aaaaatccca tcttagtatt
     1741 catctgagaa ttcataaagg agagaaaccc tacaaatgta gtgactgtga caaatgcttt
     1801 actgaaaaac gcaaactgag aaggcatcag aaaattcata caggagaaaa accttacaaa
     1861 tgtagtgaat gtgacaaatg ctttatacaa aaatacagtc ttagtgatca tcagagaatt
     1921 catacaggag agaaacctta caaatgtagt gaatgtaaca aatgctttat acaaaaatcc
     1981 agtcttaata atcatcagag tattcataca ggagagaaac cttacaaatg tagtgaatgt
     2041 gacaaatgct ttactgataa acgcaatctg agaaggcatc agaaaattca tacaggagag
     2101 aaaccttaca aatgtagtga atgtgagaaa tgctttactg acaaaggcag tctgagaagg
     2161 catcagaaaa ttcatacagg agagaaacct tacaaatgta gtgaatgtga gaaatgctat
     2221 actgacaaag gcagtctgag aaggcatcag aaaattcata aaggagagaa acttacaaat
     2281 gcagtgaatg tgacaaatgc tttactgaaa aaggcaatct gagaattcat cagaaaattc
     2341 attcaggaga gaaaccttac aaatgtcatg aatgtgacaa gtgctttccc caaaaatcct
     2401 atcttagtat tcatccgaga attcataaag gagagaaccc ttacaaatgc gaatgtgaga
     2461 aatgctttac ccgaaaatcc tatcttagta ttcatcagag aattcataca ggagagaaac
     2521 cttacaaatg cagtgaatgt gacaaatgct ttactgaaaa gggcaatctg agaaggcatc
     2581 agaaaattca tacaagagag aaaccttaca aatgtagtga atgtgagaaa tgctttactg
     2641 acaaaggcag tctgagaagg catcagaaaa ttcataaagg agagaaacct tacaaatgca
     2701 gtgaatgtga caaatgcttt actgaaaaag gcaatctgag aattcatcag aaaattcatt
     2761 caggagagaa accttacaaa tgtcatgaat gtgataagtg ctttccccaa aaatcttatc
     2821 ttaatattca tccgagaatt cataaaggag agaaacctta taaatgtagt gaatgtaaaa
     2881 aatgctttac ccgaaaactc gaaattagta ttcatcagag aattcataca ggagagaaac
     2941 cttacaaatg cagtgaatgt gacaaatgct ttactgaaaa aggcaatttg agaaggcatc
     3001 agaaaattca tacaggagag aaaccttaca aatgtagtga atgtgacaaa tgctttaccc
     3061 aaaaattcca acttagtatt catcagagaa ttcatacagg agagaaacct tacaagtgta
     3121 gtgaatgtga aaaatgtttt actgacaaag gcagtctgag aaggcatcag aaaattcata
     3181 caggagagaa actttcaaat gtagtgaagg tgacaaatgt tttaatcaca aatcccatct
     3241 tagtatttat cagagaattc atacaggaga ggaaccttac aaatagtttg tatgtgacaa
     3301 atacaatact cacaatgtca gtctgagaaa tcatcagtta tttcatacag tagagaatct
     3361 ttataaatga agtgaatgag acaattcttt accaagatac agcatcttaa aattcactag
     3421 agaatactta cagaagagga acttttcaaa tatatcgaag gtatgaattc tttatttttg
     3481 cctatttcct agaatgtaac tgtgaatgct aataagctag aaacttaacg catgtattgt
     3541 atgaagaaat atctttgaat tcattttagt cagagaaaac atctaagaac tttttaaggg
     3601 aaagtatttc tgttgagaaa aaggtggcat atgttttatt catggcatat tcttggcaat
     3661 actcaaggct ccacactaga gaattagtat aattatgaga atcttttgaa aattttcatg
     3721 caatgttcaa atcttaaata atgtcgactc tgacaatttg aaaaaatgta gcaagccttt
     3781 ctttctttct ttctttcttt ctttctttct ttctttcttt tttttggggg ggggttggtt
     3841 tttagagaca gggtttctct gtatatccat ggccatcctg tagaccaggc tggcctcgaa
     3901 ctcagtaatc cgcctgcctc tctctcccga gtgcttggat taaagacatg tgccaccacg
     3961 cccagttgta gaaagctttt catgacacct ttttatttgt tcaccctcaa atgtggcaag
     4021 atgaagacaa gctgggaagt cagaagatag tattgtgtaa cactttcttt aagacagaaa
     4081 taatccattt caaaaggaaa ctatttaagg tctttaatac aatcctcaaa atatctaata
     4141 aaactggtaa cattctgtat atttaattaa aatgaaccaa ttaagataaa aatatactta
     4201 aaagattatc tggcaaactg agctacccag acagcatatt ctttattcta taaatatgct
     4261 tgcagatgtg aagtgtgctt cgagtatcca gtaatcataa ttcttctcaa atacttgttt
     4321 cacattatag gataacaagt gactccgagt ctcttgtgat ctgctcaaca actcctttcc
     4381 tattgtcctg taactaactc caataaagct gaaagattct a
//
