LOCUS       NM_145078               2576 bp    mRNA    linear   ROD 09-MAR-2022
DEFINITION  Mus musculus zinc finger protein 979 (Zfp979), mRNA.
ACCESSION   NM_145078 XM_003688805 XM_003689179
VERSION     NM_145078.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2576)
  AUTHORS   Ratnam S, Bozek G, Martin T, Gallagher SJ, Payne CJ and Storb U.
  TITLE     Ssm1b expression and function in germ cells of adult mice and in
            early embryos
  JOURNAL   Mol. Reprod. Dev. 84 (7), 596-613 (2017)
   PUBMED   28464323
  REMARK    GeneRIF: this work demonstrates that HRD methylation by Ssm1b is
            more temporally restricted during spermatogenesis compared to
            oogenesis, and is altered when embryonic stem cells are cultured
            from C3H/HeJ inner cell mass cells.
REFERENCE   2  (bases 1 to 2576)
  AUTHORS   Dietrich JE, Panavaite L, Gunther S, Wennekamp S, Groner AC, Pigge
            A, Salvenmoser S, Trono D, Hufnagel L and Hiiragi T.
  TITLE     Venus trap in the mouse embryo reveals distinct molecular dynamics
            underlying specification of first embryonic lineages
  JOURNAL   EMBO Rep. 16 (8), 1005-1021 (2015)
   PUBMED   26142281
REFERENCE   3  (bases 1 to 2576)
  AUTHORS   Ratnam S, Engler P, Bozek G, Mao L, Podlutsky A, Austad S, Martin T
            and Storb U.
  TITLE     Identification of Ssm1b, a novel modifier of DNA methylation, and
            its expression during mouse embryogenesis
  JOURNAL   Development 141 (10), 2024-2034 (2014)
   PUBMED   24803651
  REMARK    GeneRIF: Cloning and expression analysis of Ssm1b protein
            (2610305D13Rik) during mouse embryogenesis.
REFERENCE   4  (bases 1 to 2576)
  AUTHORS   Guo G, Huss M, Tong GQ, Wang C, Li Sun L, Clarke ND and Robson P.
  TITLE     Resolution of cell fate decisions revealed by single-cell gene
            expression analysis from zygote to blastocyst
  JOURNAL   Dev. Cell 18 (4), 675-685 (2010)
   PUBMED   20412781
REFERENCE   5  (bases 1 to 2576)
  AUTHORS   Yokoyama S, Ito Y, Ueno-Kudoh H, Shimizu H, Uchibe K, Albini S,
            Mitsuoka K, Miyaki S, Kiso M, Nagai A, Hikata T, Osada T, Fukuda N,
            Yamashita S, Harada D, Mezzano V, Kasai M, Puri PL, Hayashizaki Y,
            Okado H, Hashimoto M and Asahara H.
  TITLE     A systems approach reveals that the myogenesis genome network is
            regulated by the transcriptional repressor RP58
  JOURNAL   Dev. Cell 17 (6), 836-848 (2009)
   PUBMED   20059953
REFERENCE   6  (bases 1 to 2576)
  AUTHORS   Evsikov AV, Graber JH, Brockman JM, Hampl A, Holbrook AE, Singh P,
            Eppig JJ, Solter D and Knowles BB.
  TITLE     Cracking the egg: molecular dynamics and evolutionary aspects of
            the transition from the fully grown oocyte to embryo
  JOURNAL   Genes Dev. 20 (19), 2713-2727 (2006)
   PUBMED   17015433
REFERENCE   7  (bases 1 to 2576)
  AUTHORS   Piao Y, Ko NT, Lim MK and Ko MS.
  TITLE     Construction of long-transcript enriched cDNA libraries from
            submicrogram amounts of total RNAs by a universal PCR amplification
            method
  JOURNAL   Genome Res. 11 (9), 1553-1558 (2001)
   PUBMED   11544199
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            CF161903.1, CD548052.1, AL606910.14 and DV659285.1.
            
            On or before Mar 2, 2012 this sequence version replaced
            XM_003689179.1, XM_003688805.1, NM_145078.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: DV658683.1, CD548052.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMN00849382,
                                           SAMN00849384 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-23                CF161903.1         1-23
            24-587              CD548052.1         2-565
            588-2077            AL606910.14        35878-37367         c
            2078-2576           DV659285.1         1-499
FEATURES             Location/Qualifiers
     source          1..2576
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="4"
                     /map="4"
     gene            1..2576
                     /gene="Zfp979"
                     /gene_synonym="2610305D13Rik; Ssm1b"
                     /note="zinc finger protein 979"
                     /db_xref="GeneID:112422"
                     /db_xref="MGI:MGI:2148252"
     exon            1..145
                     /gene="Zfp979"
                     /gene_synonym="2610305D13Rik; Ssm1b"
                     /inference="alignment:Splign:2.1.0"
     exon            146..239
                     /gene="Zfp979"
                     /gene_synonym="2610305D13Rik; Ssm1b"
                     /inference="alignment:Splign:2.1.0"
     exon            240..321
                     /gene="Zfp979"
                     /gene_synonym="2610305D13Rik; Ssm1b"
                     /inference="alignment:Splign:2.1.0"
     CDS             247..1470
                     /gene="Zfp979"
                     /gene_synonym="2610305D13Rik; Ssm1b"
                     /codon_start=1
                     /product="uncharacterized protein LOC112422"
                     /protein_id="NP_659544.2"
                     /db_xref="CCDS:CCDS59663.1"
                     /db_xref="GeneID:112422"
                     /db_xref="MGI:MGI:2148252"
                     /translation="MFAPHQESGRRTTKRMSASLENTAQCLLTFKDVFLDFSSEEWEC
                     LNFAQRTLYMDVMLENYNNLLFVENHCICGNYEKEKVLEQDTQHIFNEHGHIQEKSFK
                     CNESNNIIHESSQSTPHKTNHRDATLQSSNLKRHKTRTTKEVCTYKDCVNRLKVSSTI
                     SLNQGTHIEKKEHNRNKNLDEVLVSKHKPIVRQNNSEMNTYTCGEFDKCFTQSDNLQS
                     QQRIYPLKKSYKYSESDKCFTQKFYLGIHQKIHTGEKFYKCNESDKCFKHKFNLSMHQ
                     RIHTGEKTYKCIECNKCFMQQSLLSNHERIHTGKKPYKCSECDKCFTHQVSLSIHQRI
                     HSEKKPSKYSECEKCFTHKFNLRTHQTIHTGEKPYKCSECDKCFTHQVSLRIHQRTHS
                     GEKPYKCTECYKCFA"
     exon            322..448
                     /gene="Zfp979"
                     /gene_synonym="2610305D13Rik; Ssm1b"
                     /inference="alignment:Splign:2.1.0"
     exon            449..2561
                     /gene="Zfp979"
                     /gene_synonym="2610305D13Rik; Ssm1b"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctcgatgtat ctcggctgcc tcgtggtcag gaagccatgg aaggagacta gtgcctagta
       61 tttgcggaac ctgaaaactt ccttaagctg cagttgctgt gctggcctcc taggacattc
      121 agcagctggt cctgttgcct tccaggtctc catatgctca gtcaactctc cataactgta
      181 aatcaacact aagagcacta gaaggttaaa ggtcaaggag actctcacaa aggatccaga
      241 acttgaatgt ttgctcctca ccaagaatct gggagaagaa caactaaaag aatgagtgct
      301 tctctggaaa acactgcaca gtgtctatta accttcaagg atgtgttttt ggacttctca
      361 tcagaggaat gggaatgtct caattttgct cagaggacat tgtacatgga tgtgatgttg
      421 gagaattaca acaatctgtt gtttgtggaa aatcactgca tatgtggaaa ctatgagaag
      481 gagaaggtct tggaacaaga cacacagcac attttcaatg agcatgggca tatccaagag
      541 aagtctttta aatgtaatga gtctaacaat ataattcatg aatcctccca aagtacacct
      601 cataaaacta accacagaga tgccactctt caatcttcaa acctaaaaag acataaaact
      661 cggaccacta aagaagtttg cacatataaa gactgtgtaa accgtttaaa ggtgtcttct
      721 accattagtc tcaatcaagg aacccacata gagaagaaag aacacaacag aaataaaaat
      781 cttgatgagg ttttggtttc taaacataaa cccattgtga gacaaaacaa tagtgaaatg
      841 aacacttaca cttgtggtga atttgacaaa tgctttactc agagtgacaa tcttcaaagt
      901 cagcagagaa tttatccatt aaagaaatct tacaaatata gtgaaagtga caaatgcttt
      961 acacaaaagt tctatcttgg tatccatcag aaaattcata ctggagagaa attttataaa
     1021 tgtaatgaaa gtgacaaatg ttttaaacac aaattcaatc ttagtatgca tcagagaatt
     1081 catacaggag agaaaactta caaatgcatt gaatgtaaca aatgctttat gcaacaatcc
     1141 cttcttagta atcatgagag aattcataca ggaaagaagc cttacaaatg tagtgaatgt
     1201 gacaaatgct ttacccacca agttagtctg agtattcatc agagaattca ttcagaaaag
     1261 aaaccttcca aatatagtga gtgtgaaaaa tgctttaccc acaaatttaa tctgagaaca
     1321 catcagacaa ttcatacagg agagaaacct tacaaatgca gtgaatgtga caaatgcttt
     1381 acccaccaag ttagtctgcg tattcatcaa agaactcatt caggagagaa accttacaaa
     1441 tgtactgaat gttacaagtg ctttgcttaa taatgcagtc tgagaattga tcagagaatt
     1501 catagaggag agaaacctta caaatatagt gaatgtgata aatgctttac ccaaaaatac
     1561 catctgaaaa gtcatcagag aattcgtaaa tgagacaaac cttacgaatg ttgtatatgt
     1621 gacaaatgca ttaccacaac ctcagtgtaa gaaattgtca gagatgtcat atagtggaga
     1681 aaatttaaaa gtgaaatgaa tgagggaatc ctttatgaag aaatatcatc tagaaattca
     1741 tacaaaatag ttgtaggaga gaaaaccttt caaatgtatt gaagatgtga atcctttagt
     1801 tttggcctat ctcttagaat ttaacagaga aaatattcag ccaagaatct taacaaatat
     1861 aatgtatgca gaaatatctt tgactttatt tcaggttaaa gaaaacatat aaacattttt
     1921 ttatgaggaa agtatttctg ctgggaaaaa tgtggcctat gttttattta gggtgtattc
     1981 tttgcaatac ttacatctct acaatgagaa tcagaatgat catgaaaatc ttatgaaaat
     2041 cttctcacaa tgtgtatgtc ttagataatg tcaactattt atgctgagag aaactctgaa
     2101 aatgtgacaa tataggaaag ctttcattaa acttttactt gttcactctc aaatattata
     2161 agatcaagat aagtggggaa gccatacgac tatagtattg tgtaaccctt tcatggagac
     2221 agaaataata aatttcaaag ggaatctaat taaggtatat actacactcc taaaagtatc
     2281 taataaaaca ggcagcaatc tgtatatata attgaaatga aaaagttcag gcaaattgta
     2341 cttaaaattg tatttgacaa agtgaacccc aagactgcat ttccttatcc aatatttata
     2401 cctacagatg tgaagtttgc tttgagtatc cagtattcat aatttttcta tcaagtattg
     2461 gtttcttgtt tcaagataac aactgattta tgaccccctt ttgttctagt caacaactcc
     2521 ttcactaatg tattgtaaat aaagctgaat gattcaccaa taaaaaaaaa aaaaaa
//
