LOCUS       NM_001005358            2680 bp    mRNA    linear   ROD 07-AUG-2023
DEFINITION  Mus musculus zinc finger protein 960 (Zfp960), transcript variant
            1, mRNA.
ACCESSION   NM_001005358
VERSION     NM_001005358.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2680)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 2680)
  AUTHORS   Friedel RH, Seisenberger C, Kaloff C and Wurst W.
  TITLE     EUCOMM--the European conditional mouse mutagenesis program
  JOURNAL   Brief Funct Genomic Proteomic 6 (3), 180-185 (2007)
   PUBMED   17967808
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC117220.4.
            
            On Aug 7, 2009 this sequence version replaced NM_001005358.1.
            
            Transcript Variant: This variant (1) represents the longer
            transcript and encodes the longer isoform (1).
            
            Sequence Note: This RefSeq record was created from genomic sequence
            data to make the sequence consistent with the reference genome
            assembly. The genomic coordinates used for the transcript record
            were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC018101.1, SRR7345562.3329689.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849375, SAMN00849380
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-104               AC117220.4         48769-48872
            105-231             AC117220.4         70187-70313
            232-292             AC117220.4         70556-70616
            293-2680            AC117220.4         71910-74297
FEATURES             Location/Qualifiers
     source          1..2680
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="17"
                     /map="17 9.77 cM"
     gene            1..2680
                     /gene="Zfp960"
                     /note="zinc finger protein 960"
                     /db_xref="GeneID:449000"
                     /db_xref="MGI:MGI:3052731"
     exon            1..104
                     /gene="Zfp960"
                     /inference="alignment:Splign:2.1.0"
     CDS             75..1715
                     /gene="Zfp960"
                     /note="isoform 1 is encoded by transcript variant 1"
                     /codon_start=1
                     /product="zinc finger protein 960 isoform 1"
                     /protein_id="NP_001005358.2"
                     /db_xref="CCDS:CCDS49964.1"
                     /db_xref="GeneID:449000"
                     /db_xref="MGI:MGI:3052731"
                     /translation="MMRILSLPTENAVTYYDVLVSFTQEEWALLDPSQKSLYKDVMLE
                     TYRNLTAIGYNWEEDNIEEDCENSGRPTRHLQRDGPSNTGEKPFECIQYDGAFARNHH
                     QLHKDTGSFMSYTDRQIHRRPHTEEKVYDGNQCGKTFSCHNHFEIRKGTYTGEKPYEC
                     NQCGKAFARHSNLLDHKRIHTGEKPYKCKQCGKDFTHHSTLHIHKRIHTREKTYKCNQ
                     CMTIAHLQCHKITHTGEKPYACKKCGKTFAYHKTLQIHERTHTGEKLYQCNQCAKAFP
                     YHRTLQIHERTHTGEKPYECNQCGKAFACLRNLQNHKTTHTGEKPYECNQCGRAFRQY
                     VYLQCHERIHTGEKPFECNQCGKAFARHSTLQRHKRTHTGEKPYECNQCGKAFACPRY
                     LQIHKRTHTGEKPYECNQCGKAFACHRYLQIHKRTHTGERPYECNQCGKAFTCRSNLQ
                     IHKRTHTGERPYECNQCGKAFTCRSNLQIHKRTHTGEKPYECNQCGKAFTQFFPLKRH
                     EITHTKEKPYECNQCGKAFTRHSTLQIHKRTHTGEKPV"
     exon            105..231
                     /gene="Zfp960"
                     /inference="alignment:Splign:2.1.0"
     exon            232..292
                     /gene="Zfp960"
                     /inference="alignment:Splign:2.1.0"
     exon            293..2680
                     /gene="Zfp960"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gcaggcttaa gtgatttgtc ctgtgtgctg ctgggtactg tgaaggaaac tcaggcaagt
       61 tctgaaagtg cgacatgatg aggatattgt cacttcccac agagaacgca gtgacgtact
      121 atgatgtcct ggtgagcttt actcaggaag aatgggcttt gctggatcct tcccagaaga
      181 gtctctacaa agatgtgatg ctcgaaacct ataggaacct cactgccata ggctataact
      241 gggaagaaga taatattgaa gaagattgtg aaaattctgg aagacccact aggcatcttc
      301 aaagggatgg accaagtaat actggagaga aaccctttga atgtattcaa tatgatggag
      361 cctttgcaag aaaccatcat cagttacata aggacactgg atctttcatg tcttatactg
      421 atcgtcaaat acatagaaga ccacacactg aagaaaaagt ctatgatggt aaccaatgtg
      481 gtaaaacctt ttcatgtcac aaccattttg aaatccgtaa aggaacatat actggagaaa
      541 aaccctatga atgtaatcaa tgtgggaaag cctttgcacg ccacagcaat cttctagacc
      601 ataaaagaat acatactgga gagaaaccct ataaatgtaa gcaatgtggc aaagacttta
      661 cccatcacag tactcttcat atccataaaa gaatacatac tagagagaaa acctataaat
      721 gtaaccagtg tatgaccatt gctcatcttc aatgtcataa aataacacat actggagaga
      781 aaccctatgc atgtaaaaaa tgtggcaaaa cctttgcata tcacaaaact cttcaaatcc
      841 atgaaagaac acatactgga gaaaaactct atcaatgtaa ccaatgtgcc aaagcctttc
      901 catatcacag aactcttcaa atccatgaaa gaacacatac tggagagaaa ccatatgaat
      961 gtaatcaatg tggcaaagcc tttgcatgtc ttagaaatct tcaaaatcat aaaacaacac
     1021 atactggaga gaaaccctat gaatgtaacc agtgtggcag agcctttaga caatatgttt
     1081 atcttcagtg tcatgaaaga atacatactg gagagaaacc ctttgaatgt aatcaatgtg
     1141 gcaaagcctt tgcacgtcac agcactcttc aaagacataa aagaacacat actggagaga
     1201 aaccctatga atgtaatcaa tgtggcaaag cctttgcatg tcccagatac cttcaaatcc
     1261 ataaaagaac acatactgga gagaaaccct atgaatgtaa tcaatgtggc aaagcctttg
     1321 catgtcacag ataccttcaa atccataaaa gaacacatac tggagagaga ccttatgaat
     1381 gtaatcagtg tggcaaggcc tttacatgtc gcagtaatct tcaaatccat aaaagaacac
     1441 atactggaga gagaccttat gaatgtaatc agtgtggcaa ggcctttaca tgtcgcagta
     1501 atcttcaaat ccataaaaga acacatactg gagagaaacc ctatgaatgt aaccagtgtg
     1561 gcaaagcctt tacacaattt tttcctctta aacgtcatga aataacacat accaaagaga
     1621 aaccctatga atgtaaccag tgtggcaaag cctttacacg ccacagtact cttcaaatcc
     1681 ataaaagaac acatactgga gaaaaacccg tatgaatgta atcaatgtgg caaagccttt
     1741 gcaggtcaca gtactcttca aaatcataaa agaatacata ctggagagaa gccctatgaa
     1801 tttaaccagt gtagcaaagc ttttacacaa tttgttcatc ttcagtgtca tcaaaggtta
     1861 catactggag agaaacccta tgaatgtaac aatgtgggaa agcctttgca tgtcacagta
     1921 ctccatgaat tcataaaaga acacatactg gagagatacc ctatgaatgt aaccagtgtg
     1981 gcaaagcctt tacacaattt tttcatctta aacgtcatga aataacacat accaaagaga
     2041 aaccctatga atgtaaacaa tgtggcaaag cctttacacg ccacagtact cttcaaatcc
     2101 ataaaagaac acatactgga gaaaaacccg tatgaatgta atcaatgtgg caaagccttt
     2161 gcaggtcaca gtactcttca aaatcataaa agaatacata ctggagagaa accctatgaa
     2221 tttaaccagt gtagcaaagc ttttacacaa tttgttcatc ttcagtgtca tcaaaggtta
     2281 catactggag agaaacccta tgaatgtaaa caatgtgtca aagcctttac atgtcacagt
     2341 actcttcaaa tccgtaaaag aacacgtact ggagaaaaac cctgtgtatg taaacaatgt
     2401 ggcaaagcct ttgcatgtca cagtactcca tgaattcata aaagaacaca tactggagag
     2461 ataccctatg aatgtaacca gtgtggtaaa acctttgcac gacacagtca gcttcaaaca
     2521 cataaaagaa tacatattga agaaaaaccc ggataatgca gtgaatgtga taaaggcttt
     2581 gttattgtag tctgaaaagg aattttaaaa acaaattctt gtgaaaaccc tataaatgta
     2641 atcaatctaa taaagccatt tgttagcagt caccttctaa
//
