LOCUS       NM_001142943            3497 bp    mRNA    linear   ROD 04-AUG-2023
DEFINITION  Mus musculus zinc finger protein 949 (Zfp949), transcript variant
            1, mRNA.
ACCESSION   NM_001142943 XM_150216 XM_918228
VERSION     NM_001142943.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3497)
  AUTHORS   Teratake Y, Kuga C, Hasegawa Y, Sato Y, Kitahashi M, Fujimura L,
            Watanabe-Takano H, Sakamoto A, Arima M, Tokuhisa T and Hatano M.
  TITLE     Transcriptional repression of p27 is essential for murine embryonic
            development
  JOURNAL   Sci Rep 6, 26244 (2016)
   PUBMED   27196371
  REMARK    GeneRIF: Nczf is essential for embryonic development and cell
            proliferation by negatively regulating p27 mRNA expression in mice.
            Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3497)
  AUTHORS   Kitahashi M, Sato Y, Fujimura L, Ozeki C, Arima M, Sakamoto A,
            Yamamoto S, Tokuhisa T and Hatano M.
  TITLE     Identification of the consensus DNA sequence for Nczf binding
  JOURNAL   DNA Cell Biol 26 (6), 395-401 (2007)
   PUBMED   17570763
REFERENCE   3  (bases 1 to 3497)
  AUTHORS   Saba L, Bhave SV, Grahame N, Bice P, Lapadat R, Belknap J, Hoffman
            PL and Tabakoff B.
  TITLE     Candidate genes and their regulatory elements: alcohol preference
            and tolerance
  JOURNAL   Mamm Genome 17 (6), 669-688 (2006)
   PUBMED   16783646
REFERENCE   4  (bases 1 to 3497)
  AUTHORS   Stryke D, Kawamoto M, Huang CC, Johns SJ, King LA, Harper CA, Meng
            EC, Lee RE, Yee A, L'Italien L, Chuang PT, Young SG, Skarnes WC,
            Babbitt PC and Ferrin TE.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK015179.1, BU610496.1, BC141010.1 and AC163666.2.
            
            On or before Jan 2, 2009 this sequence version replaced
            XM_918228.3, XM_150216.6.
            
            Transcript Variant: This variant (1) represents the longer
            transcript. Both variants 1 and 2 encode the same protein.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC141009.1, SRR1660811.57581.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849374, SAMN00849375
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-64                AK015179.1         3-66
            65-600              BU610496.1         1-536
            601-897             AK015179.1         603-899
            898-1834            BC141010.1         589-1525
            1835-1835           AC163666.2         120957-120957       c
            1836-3497           BC141010.1         1527-3188
FEATURES             Location/Qualifiers
     source          1..3497
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="9"
                     /map="9 47.24 cM"
     gene            1..3497
                     /gene="Zfp949"
                     /gene_synonym="4930422I07Rik; Nczf"
                     /note="zinc finger protein 949"
                     /db_xref="GeneID:71640"
                     /db_xref="MGI:MGI:1918890"
     exon            1..489
                     /gene="Zfp949"
                     /gene_synonym="4930422I07Rik; Nczf"
                     /inference="alignment:Splign:2.1.0"
     exon            490..635
                     /gene="Zfp949"
                     /gene_synonym="4930422I07Rik; Nczf"
                     /inference="alignment:Splign:2.1.0"
     exon            636..804
                     /gene="Zfp949"
                     /gene_synonym="4930422I07Rik; Nczf"
                     /inference="alignment:Splign:2.1.0"
     CDS             790..2601
                     /gene="Zfp949"
                     /gene_synonym="4930422I07Rik; Nczf"
                     /codon_start=1
                     /product="uncharacterized protein LOC71640"
                     /protein_id="NP_001136415.1"
                     /db_xref="CCDS:CCDS52880.1"
                     /db_xref="GeneID:71640"
                     /db_xref="MGI:MGI:1918890"
                     /translation="MNEYVELVSFEDVTVKFTWEEWQNLNDAQKMLYRSVMLETYNSL
                     LSLGQCIPKPELIFKLEQGEEPWTAEEPANKTLPVFCSVDGIIETNQKSRERHLWQVT
                     ASGHNRETEQARGPEDTFYLYSMNISNFVVNNRNCSGVKPEELNGYLNRCHPLETHEL
                     CIVERYNDCCVAGKSVRCPEQLGQCSKIETGQQDFEYIRERKDTKEGKLLKKITPSKR
                     LQVGLTSCKHSECEPLSVQSDVMANVGKATFSKKYNLTKHQATNSGRKSCKCLESKKT
                     FPSELDIIEHQRTHNQKKDHVCIQCEKPFSTKSSLTIHQRIHTGEKPYGCSECNKTFR
                     QKSALIVHERTHTGVKPFECCECGKAFQHKWYLKTHQRTHTGEKPYACIECGKAFLKK
                     SYLKMHQGTHKSDKPYECEKCGKTFHNRSYFNMHHRTHTGEKPYACSECGKAFYQKSD
                     LRRHQRIHNSEKLHECKECGKAFQNKSYLKTHQKVHTGEKPYECKECGKAFQNKSYLN
                     KHQIIHTGEKPYECNKCGKTFQWKLVLSKHHRTHTGEKPYECIQCGKMFGYKSSLIVH
                     ELIHSGEKPYECNVCRKTFSQKSNLSRHQRTHRHGEL"
     exon            805..931
                     /gene="Zfp949"
                     /gene_synonym="4930422I07Rik; Nczf"
                     /inference="alignment:Splign:2.1.0"
     exon            932..1024
                     /gene="Zfp949"
                     /gene_synonym="4930422I07Rik; Nczf"
                     /inference="alignment:Splign:2.1.0"
     exon            1025..3497
                     /gene="Zfp949"
                     /gene_synonym="4930422I07Rik; Nczf"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ggctcatggg taatgtagtc cctaacatac aaggccctcc cacacaggag caggtaaaca
       61 gctctgacat ttggctggta ggcatctctg tgtcctgcgc tctcttggca gctaccgcat
      121 agaaagtcgc atccaggctc tgtgctgacg cctttgctca ggctgtgcgt ttcttgcagg
      181 gtttctgaag gcgggtggga aagacgaaaa gaggagagtg gtctcggaac cttcgggaag
      241 cgggacccgt gccttctact tcagtggaaa cagaaacata ggtgggtctt ggaggaggga
      301 ctgagtcgca gttcgagggc ggaccgcagc ggctcagggg aaggtgactg tgagacccat
      361 cgttcccagt cggaacagtc ggcctgaaca gggctttaat ggttgcttta tccgaagact
      421 gcgctaggag tatttggatc tgtgattcca tcagtccaaa agggccaaca cggacgctct
      481 gccaaggagt gtcagatgaa gttgatgtca tcagtgcttt gaggctgcta agttctgggt
      541 gttcagtccc acatccagtg gctcctgctg agtcttctca aggctctatt tccatcaagc
      601 tagcaccaag gttcgttaca acatagctgt gtccgctaat tgcacagtgt tttgagtgga
      661 gaatctagga ccaagccatg aatatcctct cactctcatg attatacgat tctccttctt
      721 tcgagtgtat cccagtatcc tctgcgtgtt tccaggggca aaaccaaaac caagcaactt
      781 acaaacatca tgaatgaata tgtggagttg gtgtcttttg aggacgtcac tgtgaagttc
      841 acctgggagg agtggcagaa tctcaacgac gctcagaaga tgctgtacag gagtgtgatg
      901 ctggagacat ataatagcct gctgtcactg gggcaatgca tccctaaacc tgagttgatc
      961 tttaaattgg aacagggaga ggagccatgg acagcagaag aacctgcaaa caagactctg
     1021 ccagtattct gcagtgtgga tggcataatt gagaccaacc agaagagtcg agagagacat
     1081 ttgtggcaag ttactgccag tggccacaat agagaaactg agcaagcacg tggaccagaa
     1141 gacacttttt atttatactc catgaatatt tcaaattttg ttgtaaataa tagaaactgt
     1201 tcaggagtga agcctgagga gttgaatgga tacctgaata gatgtcaccc tttggagact
     1261 catgaattgt gtattgtaga gcgatataat gactgttgtg tagcagggaa atctgtcaga
     1321 tgccctgagc agttgggtca gtgttctaag attgaaactg gacagcagga tttcgaatat
     1381 atcagagaaa ggaaagatac aaaggaggga aaactattga aaaaaattac tccatctaag
     1441 agacttcaag tgggactgac ttcttgtaag catagtgagt gtgagccact ttctgttcag
     1501 tcagatgtca tggctaatgt agggaaggca acttttagta agaagtataa cctcactaaa
     1561 caccaagcaa caaactcagg gagaaaatct tgtaaatgcc ttgaaagtaa gaaaaccttt
     1621 cccagtgaat tagacattat agaacatcag aggacacata accagaaaaa agaccatgta
     1681 tgtatccagt gtgagaaacc ctttagcact aaatcttccc ttactattca tcagagaatt
     1741 cacacaggag aaaagcccta tggatgcagt gaatgtaata aaaccttcag acaaaagtca
     1801 gctctcattg tacatgagag gactcacact ggagtgaaac ccttcgaatg ttgtgagtgt
     1861 ggtaaagcct tccaacataa gtggtatctc aaaacgcacc agagaactca tactggggag
     1921 aaaccgtatg cgtgtataga atgtggaaaa gcctttctaa agaagtcata cctcaaaatg
     1981 catcagggaa ctcacaagag tgataaacca tatgaatgtg agaaatgtgg aaaaaccttc
     2041 cataacaggt catacttcaa catgcatcac agaactcaca cgggtgagaa gccctatgca
     2101 tgcagtgagt gtggaaaagc cttttaccaa aagtcagacc tcaggaggca tcagaggata
     2161 cataacagtg agaaattaca tgaatgtaaa gaatgtggaa aagcctttca aaataagtca
     2221 tacctcaaaa ctcaccagaa agttcacaca ggtgagaaac catatgagtg taaagagtgt
     2281 gggaaagcct ttcaaaacaa gtcatatctc aacaagcatc agataattca cacaggtgaa
     2341 aagccctatg agtgcaataa atgtgggaaa acgtttcagt ggaagttagt cctcagcaag
     2401 catcacagaa cccacacagg tgaaaagccc tatgaatgca ttcagtgtgg aaaaatgttt
     2461 ggctacaagt cgtccctcat tgtacatgag ttgattcatt ctggggagaa accttatgaa
     2521 tgtaatgttt gtagaaaaac cttttcacag aagtcaaacc taagccggca tcagagaact
     2581 caccgacatg gggagctatg ataggaacag gtatggatgc tcagcagcca actcactgac
     2641 ttggggaaga caagatgaag tcaaggacgg gtctgcagcc tgtgttcctc ttggggtgtc
     2701 agacactgct gcataccagg ctggaagcgt gaaaacagtc caggaggtga aggagcttgg
     2761 tctggtttgg agtgagtgac agcggggcag gagaagagag aggtcttcag gagttgtagt
     2821 gttatggctc ctttaggtga aggccttgtc tgaggcgatc tttaatggag aagctcgctg
     2881 agatgatctt agcttgtttg tattatgtta ttgggggtgg ataggcttta ttctgggtga
     2941 acaagagatg atgtcatttt ggggaagggt gtgagaaact ccaggaagga aggtcattgg
     3001 ctgacggctg aggttattga ggtgcctcat cagcatggca aggtgttcca ggtgctgtgc
     3061 tgtgtgactc actgcctacg gccacattag ttacggctca tgattacaag ctccagagtg
     3121 gagcatggag gcagggaggg ggcaagccta ctcctgctgt ctcagatctc ccaggttccc
     3181 agagtttgag catacttcca cctcaccagt ctcatgccca tctactggca tggtccacct
     3241 gccctacatc cagatagacc tttaagcctt agaatgcatc aagaataaca agcaagaatc
     3301 cactccaggg gaggggctgg agagatggct cagcagttaa gagcactgtc tgctcttgca
     3361 gaggtcctga gttcaattcc cagcaacaaa agagggtgtc tgatgccctc ttttggtgtg
     3421 tctgaagaca ctacagtgta ctcacaaata aattttttta aaaaaagaat ccacttcagt
     3481 ttgagtagtg ttctttg
//
