LOCUS       NM_198003               2983 bp    mRNA    linear   ROD 07-AUG-2023
DEFINITION  Mus musculus zinc finger protein 946 (Zfp946), transcript variant
            2, mRNA.
ACCESSION   NM_198003
VERSION     NM_198003.3
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2983)
  AUTHORS   Gaudet P, Livstone MS, Lewis SE and Thomas PD.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC122270.4.
            
            On Sep 13, 2016 this sequence version replaced NM_198003.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC098460.1, SRR7652917.100503.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164133, SAMN01164134
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-228               AC122270.4         159100-159327       c
            229-313             AC122270.4         154964-155048       c
            314-437             AC122270.4         139238-139361       c
            438-534             AC122270.4         136636-136732       c
            535-590             AC122270.4         132377-132432       c
            591-717             AC122270.4         129951-130077       c
            718-2983            AC122270.4         126840-129105       c
FEATURES             Location/Qualifiers
     source          1..2983
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="17"
                     /map="17 11.4 cM"
     gene            1..2983
                     /gene="Zfp946"
                     /gene_synonym="1300003B13Rik"
                     /note="zinc finger protein 946"
                     /db_xref="GeneID:74149"
                     /db_xref="MGI:MGI:1921399"
     exon            1..228
                     /gene="Zfp946"
                     /gene_synonym="1300003B13Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            229..313
                     /gene="Zfp946"
                     /gene_synonym="1300003B13Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            314..437
                     /gene="Zfp946"
                     /gene_synonym="1300003B13Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            438..534
                     /gene="Zfp946"
                     /gene_synonym="1300003B13Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            535..590
                     /gene="Zfp946"
                     /gene_synonym="1300003B13Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             561..2132
                     /gene="Zfp946"
                     /gene_synonym="1300003B13Rik"
                     /note="isoform b is encoded by transcript variant 2"
                     /codon_start=1
                     /product="zinc finger protein 946 isoform b"
                     /protein_id="NP_932120.1"
                     /db_xref="CCDS:CCDS50001.1"
                     /db_xref="GeneID:74149"
                     /db_xref="MGI:MGI:1921399"
                     /translation="MTASLLNVSKDLLRFKDVAVEFSQEEWECLDCAQRALYMDVMLE
                     NYNNLFFVVFSENDHICYKYKNVLDEDAQQIVHQHLNIQEKSYKCHELAKITHASTQN
                     SPYKINLRDTTVESSKLNRHRTGNIREPCKYKNCVNCLSVCSIISLNQGIHINKKEHN
                     GTEFDKIFESKEKRMLKPTNSGKKPYKCSECEECFTQLCDLKSHQRNHIGEKLCKSSE
                     HDNCFALKSDLRIHQPVHTRGKPYKCNECIKSFTQKSSLKRHQRIHTGEKPYKCSECN
                     KCFSHKYILIIHQKIHTGEKPYKCNACGKCFTLKGELRIHQRIHTGEKPYKCSECDKS
                     FTQKGQLIIHQRIHTGEKPYKCSECDKCFIKKYSLVTHQRMHTGENPYKCSECDKCFT
                     LKSGLRIHERIHTGEKPYKCSECDKSFIKKIYLRIHQSVHIGEKLYKCSECDKCFMHK
                     CSLSSHQRLHTGEKPYKCSICDKCFTSKGYLGSHQRIHTGEKPYQCSECDKCFTHKGS
                     LKRHERIHTGVKLYK"
     exon            591..717
                     /gene="Zfp946"
                     /gene_synonym="1300003B13Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            718..2983
                     /gene="Zfp946"
                     /gene_synonym="1300003B13Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gaaccggggc cgtagtgggc gggtctagga gagcagctcc aaagatcaag tcagatagga
       61 aaattcacca ttcccttagg tacttaagtg aacaacttgt tctctaaccg ggggctggtt
      121 ttcctgtcct ggttatttct ggacctaggg aaaactcggg cctggaagag tcagccgtca
      181 gctgtgcagc ggcggacacc gcagccccgc ggccctggaa cctcccaggt ctgtctccca
      241 ctgctcatcc taatctgttt acccatgaat cagaactcag aacactggat ggtgactaca
      301 acaaaggatc cagtttattt atatggtgga ttatgttgat ggatgttcat atatagaacc
      361 atccaagcat tcctgggatg aagcctattt gatcttgatg aatgatgatg tctttgatgt
      421 gctcctggat tgggtttatg cagaactctc agatacctct ccagcatcac atctgcctgc
      481 atgctgccat gcttccttcc ttccatgatg ataagtgacc aaacatctga aactgaactc
      541 ggagagtaac aagaggaaga atgactgctt ctctgctaaa tgtttccaag gatctgttaa
      601 gattcaagga cgtggctgtg gaattctcac aggaggaatg ggaatgtctt gactgtgctc
      661 agagggcatt gtacatggat gtgatgctgg agaattacaa caatctattt tttgtggttt
      721 tttcagaaaa tgatcatata tgttacaaat ataagaatgt cttggatgaa gacgcacagc
      781 aaattgtcca ccagcatttg aatatccaag agaagtctta taaatgccat gagcttgcta
      841 aaatcaccca tgcatccacc caaaatagtc cttataaaat taacctcaga gatacaactg
      901 ttgaatcatc aaagctaaac agacatagaa ctggaaacat cagagaacct tgtaaatata
      961 aaaattgtgt aaactgttta agtgtgtgtt ctatcattag tctaaatcaa ggaatccaca
     1021 taaataagaa agaacacaat ggtacagagt ttgataagat ttttgagtct aaagaaaaac
     1081 gcatgctgaa accaaccaat agtggaaaga aaccttacaa atgtagtgaa tgtgaggaat
     1141 gcttcaccca gctatgcgat cttaaaagtc atcagcgaaa tcatatagga gagaaacttt
     1201 gcaaaagtag tgaacatgac aactgttttg ccctcaaaag tgatcttaga attcatcagc
     1261 cagttcatac aagagggaaa ccttacaaat gtaatgaatg tatcaaatct tttacccaga
     1321 aatccagttt aaaaagacat cagagaattc atacaggaga aaaaccttac aaatgtagtg
     1381 aatgcaacaa atgcttttcc cataaataca ttcttattat tcatcagaaa attcatacag
     1441 gagagaaacc ttacaaatgt aatgcatgtg gcaaatgctt taccctgaaa ggagagctta
     1501 gaattcatca gagaattcat acaggagaga aaccttacaa atgtagtgaa tgtgacaaat
     1561 cttttaccca gaaaggccaa cttataattc atcagagaat tcataccgga gagaaaccct
     1621 acaaatgtag tgaatgtgac aaatgcttta tcaaaaaata cagtcttgta actcatcaga
     1681 gaatgcatac aggagagaat ccttacaaat gtagtgaatg tgacaaatgc tttaccctca
     1741 aaagtggtct tagaattcat gagagaattc acacaggaga aaaaccttac aaatgtagtg
     1801 aatgtgacaa gtcttttatc aaaaaaatct atcttagaat tcatcagagt gttcatatag
     1861 gagagaaact ttacaaatgt agtgaatgtg acaaatgctt tatgcacaaa tgcagcctta
     1921 gtagtcatca gagacttcat acaggagaga aaccttacaa atgtagtata tgtgacaaat
     1981 gctttaccag caaaggctat cttggaagtc atcagagaat tcatacagga gagaaacctt
     2041 accaatgtag tgaatgtgac aaatgcttta cccacaaagg cagtcttaaa agacatgaga
     2101 gaattcatac aggagtgaaa ctttacaaat gaagtgaatg agacaaatct tttaccaaga
     2161 tagaccatct tagaacttag tagagaagac atatagtaga gagacatata aatgtagtaa
     2221 atatgcagac actttactgt tggctcatct catagaattc ttcagagaat atatacagga
     2281 gagaacctca caaatgtgag agaaggcctt ttcccgaatc tcatatgtaa caatatatct
     2341 ggaaatttat agcgggggtg ggggaggaac tcttcacagg aaaaaaatgt agcatgtact
     2401 ttatccaggt ggtattttcc atggcacttg aggctccata ctagaaaatt attatgaaca
     2461 tgacaaactt gtaaaagtct tcaagtctta gaagcaagta tttttgctga gagaaactct
     2521 gaaaatatga caatgaagaa aattacttat tctcaaatat ttcatgatgg agacaaagtg
     2581 agaaagccag aagatgtggt attgtgtaac agtgctttga aaccaaaata attcaatgga
     2641 aaaggaaagt gattattgca gctaatatac ctctcaaaaa taatactgaa actaatagca
     2701 ttctgtatgt ttaactcaaa tgaagaaact cagacaaatt atacttctta aaagaggata
     2761 gataggacca actgagccac caacataata tggtctttat cctgttgata tacctacaga
     2821 tatgcagttt tctcccagtg tctagtattc atgatctgta tcatattctg gtttcaaatt
     2881 tctgcatagc taactgtctt tgtgtccctt gtgctgttgt caacaacttc ttgctcatat
     2941 tcctgtatgt aactacaata aaattcattg gtttatgaac tta
//
