LOCUS       NM_001419283            3010 bp    mRNA    linear   ROD 02-MAY-2024
DEFINITION  Mus musculus zinc finger protein 940 (Zfp940), transcript variant
            2, mRNA.
ACCESSION   NM_001419283 XM_011250535
VERSION     NM_001419283.1
KEYWORDS    RefSeq.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3010)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 3010)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC156934.1.
            
            On Mar 30, 2023 this sequence version replaced XM_011250535.4.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR17784643.233038.1,
                                           ERR3363657.320219.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164139 [ECO:0000348]
            ##Evidence-Data-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-400               AC156934.1         5958-6357
            401-476             AC156934.1         8617-8692
            477-603             AC156934.1         12674-12800
            604-699             AC156934.1         13070-13165
            700-3010            AC156934.1         13386-15696
FEATURES             Location/Qualifiers
     source          1..3010
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 17.26 cM"
     gene            1..3010
                     /gene="Zfp940"
                     /note="zinc finger protein 940"
                     /db_xref="GeneID:233057"
                     /db_xref="MGI:MGI:2446235"
     exon            1..400
                     /gene="Zfp940"
                     /inference="alignment:Splign:2.1.0"
     exon            401..476
                     /gene="Zfp940"
                     /inference="alignment:Splign:2.1.0"
     CDS             468..2168
                     /gene="Zfp940"
                     /note="isoform 1 is encoded by transcript variant 2"
                     /codon_start=1
                     /product="zinc finger protein 940 isoform 1"
                     /protein_id="NP_001406212.1"
                     /db_xref="GeneID:233057"
                     /db_xref="MGI:MGI:2446235"
                     /translation="MAQRLMTFRDVAVDFSPEEWECLSLDQRSLYRDVMLESYSHLVS
                     VGLFVYRPHLFSLLEKGQDPWMILRDETRGPYPDIDFSSQNKKFLGKPSTYEELSQRE
                     MKEYFRKRSLEDFCFGDGWDGKNQFQTHQNQEYFKQLAVAYEKVLTVNQGIVFNNHQR
                     LNAGEKATEIQCEKALTVESDRILPQLTPPGNKVHKDKECGDTSAPESERTHCQRAHC
                     PQTPQQGKESGGPFGLPSGILGLPQGHTGEKSYDCKECGKSFTLKSNLTRHRRIHTGE
                     RPYTCHGCGKAFTQKSHLMSHQKIHTGKKAYVCGVCGKAFHCDSSLTSHQNIHYHAAD
                     AGKKAYECKKCGKDFDCHSGLIDHQKVHTGEKPFKCKHCGRLFRFHSHLRAHTRIHSG
                     VKSYDCKECGKSFNLRSNLMRHHRVHTGERPYTCHGCGKAFSQKSHLTSHQKIHTGEK
                     AYVCGVCGKAFSRGSSLTSHQNIHYYVVNAGKKVYECKECGKAFGCHSNLSRHQKIHA
                     GEKPFKCRDCEKAFGQRAHLTKHQRIHTGEEGPDECQSVEKFFLEDHNYVDIRKSILV
                     "
     exon            477..603
                     /gene="Zfp940"
                     /inference="alignment:Splign:2.1.0"
     exon            604..699
                     /gene="Zfp940"
                     /inference="alignment:Splign:2.1.0"
     exon            700..3010
                     /gene="Zfp940"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2987..2992
                     /regulatory_class="polyA_signal_sequence"
                     /gene="Zfp940"
                     /note="hexamer: AATAAA"
     polyA_site      3010
                     /gene="Zfp940"
                     /note="major polyA site"
ORIGIN      
        1 agttcaagac ttggccagcg ccgggtctcg cggtggaccc taggcttgct ttatcagaca
       61 caccaggaag ccagttagaa gccgtctgca tgcctgcttg ctggctggga gcgcacgaag
      121 ctgtggagga ggacaactga ggagcgtgga gcgttcccga accccaaaga gaatcccaat
      181 gtaagacctg agtgtttgag accaaaccat ccctgggcag tctgatgaga ggaagccgcc
      241 tgcctagtcc cgtgggtacc agtgagcaat ggaaaatcct agtgtgtgat accctgatga
      301 gacctggtgt gtggaaggga agtgaattga gagaaactag gcgcggataa gacagatgga
      361 ttaatgggga ggcaccaaag tgctgggtag cctaatgaag ctttctcggg ctctacttgg
      421 ttgatcgtgg aacccagaag agaactactc aactcaagtt ttaagccatg gcccaaagac
      481 tgatgacgtt cagagacgtg gccgtagact tctctccaga ggagtgggag tgtctgagcc
      541 tggaccagag gagtttatac agagatgtga tgctggagag ctacagccac ctcgtctcag
      601 tgggactttt tgtttatcgg ccacatctgt tctccttgtt ggaaaaagga caagacccct
      661 ggatgatttt gagggatgag acaaggggac cttatccaga catagatttc agttctcaga
      721 acaagaagtt cctgggaaaa cctagcacat atgaagaatt atctcaaagg gaaatgaagg
      781 aatattttag aaaacgcagt cttgaagatt tctgttttgg agatggctgg gatggcaaaa
      841 atcagtttca aacgcatcaa aatcaggaat attttaagca actggcagtc gcctatgaaa
      901 aagtgctcac tgtgaaccag ggtatagttt tcaacaacca ccagagactg aatgcaggag
      961 agaaagcaac tgaaattcag tgtgaaaaag cccttactgt ggaatctgac cgtattcttc
     1021 ctcagctaac tccccctggt aacaaagtcc acaaagacaa ggagtgtggg gacacctctg
     1081 ctcctgaatc ggagcgcaca cactgtcaga gagctcactg tccccagacc cctcagcagg
     1141 ggaaggaatc tggagggccg tttggtttgc cttcaggaat actgggcctt ccgcaaggtc
     1201 acactggtga gaagtcctat gactgtaagg agtgcggaaa gtcctttact ttgaagtcaa
     1261 acttgacgcg acatcgcaga attcacaccg gtgagaggcc gtacacgtgt catggatgtg
     1321 gaaaggcgtt tacacagaaa tcccatctca tgtcacatca gaaaattcac actggaaaaa
     1381 aagcttatgt ctgtggggtc tgtggaaaag cttttcactg tgactcaagc ctgaccagtc
     1441 atcagaatat tcattaccat gcagctgatg ctggcaagaa agcatatgaa tgtaaaaagt
     1501 gtggcaaaga tttcgattgt cactcaggtc tcattgatca ccagaaagtc cacactggag
     1561 agaaaccttt taaatgtaag cattgtggaa ggctttttag gtttcattca catcttaggg
     1621 cgcacacacg gattcactct ggcgtgaagt cctatgactg taaggaatgt ggaaaatcct
     1681 ttaatttgag gtcaaacttg atgcgacatc acagagttca cacaggtgag aggccgtaca
     1741 cgtgtcatgg atgtggaaag gcgttttcac agaaatccca tctcacgtca catcagaaaa
     1801 ttcacaccgg agaaaaagct tatgtctgtg gagtctgtgg aaaagctttt agtcgcggct
     1861 caagcctgac cagtcatcag aatattcatt actatgtggt taatgctggc aagaaagtgt
     1921 atgagtgtaa agaatgtggc aaggcttttg gttgtcattc aaatcttagt cgccatcaga
     1981 aaatccatgc tggagagaaa ccgtttaaat gtagggactg tgaaaaggcc tttggtcaaa
     2041 gagcacatct taccaaacat cagagaattc acactggtga agaaggccct gatgaatgtc
     2101 agagcgtgga aaagtttttc cttgaagacc acaactatgt cgacatcaga aaatccatac
     2161 tggtgtgaaa tgatggaatg tatgaggaat gtagaatgtg gctcttattc gtggttttta
     2221 ttgtacccac actggaatat tcacattagt ggcaagccct gagtcccagg gatgtgggaa
     2281 agtctacatc tggagtgcag gcttaattgt caccagagca ttcatactga ggaaagaaaa
     2341 tagtccaagg aatatggaaa gactattcat ggtttaaagc ttaaatcatc atcagaaaat
     2401 atgtactgtg gaggaggctt agcaaccagg catctccacc atcaacctca gggacccagg
     2461 gatcacagga tacatcatca ccagctgcca ggatgcaacg cactctcacc acatcctttg
     2521 caagcacgtg tacagcatgc tcttataaaa agccagtgcc tccttataga gagaatccat
     2581 tgtgtactgt gtggggtcat cacccatcaa taaatagctg aaggcctatt agctgaaata
     2641 gaaggaaatt agcaagagat agaaagtgga acatctggta gcaaaagatt tgaactttgg
     2701 gagttagaca gaggcaggag attccctgaa ctctggagga gacagaagcg tgaaaccgag
     2761 gataggcaac taacaacagt ttaacagtta agtaagtgac aagctagtca aggagcaacc
     2821 ccaagcttat caagcagcca tttattcata agaaattaag tctcggagtc attgttctag
     2881 aaacaaagag gccaggtaga aaagctcgag gcgaggctgc acctcctctc cctgttcttt
     2941 tcccctccac ccttgcccag aggcagcctc tgtatgctcc ctcctcaata aacctcccag
     3001 tgagacctgt
//
