LOCUS       NM_001243021            1980 bp    mRNA    linear   ROD 06-AUG-2023
DEFINITION  Mus musculus zinc finger protein 939 (Zfp939), transcript variant
            1, mRNA.
ACCESSION   NM_001243021 XM_001474122 XM_003084689 XM_003084690 XM_003086963
            XM_003086964 XM_912283
VERSION     NM_001243021.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1980)
  AUTHORS   Stryke D, Kawamoto M, Huang CC, Johns SJ, King LA, Harper CA, Meng
            EC, Lee RE, Yee A, L'Italien L, Chuang PT, Young SG, Skarnes WC,
            Babbitt PC and Ferrin TE.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC109210.26.
            
            On or before Jul 15, 2011 this sequence version replaced
            XM_003084689.1, XM_003084690.1, XM_003086963.1, XM_003086964.1,
            XM_912283.2, XM_001474122.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR17784650.1161726.1,
                                           SRR17784649.914644.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849375, SAMN00849380
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on expression, longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-136               AC109210.26        50121-50256         c
            137-263             AC109210.26        39832-39958         c
            264-356             AC109210.26        32340-32432         c
            357-466             AC109210.26        28268-28377         c
            467-1874            AC109210.26        25509-26916         c
            1875-1980           AC109210.26        22358-22463         c
FEATURES             Location/Qualifiers
     source          1..1980
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="7"
                     /map="7 25.48 cM"
     gene            1..1980
                     /gene="Zfp939"
                     /gene_synonym="9430025M13Rik"
                     /note="zinc finger protein 939"
                     /db_xref="GeneID:233147"
                     /db_xref="MGI:MGI:3036240"
     exon            1..136
                     /gene="Zfp939"
                     /gene_synonym="9430025M13Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             134..1897
                     /gene="Zfp939"
                     /gene_synonym="9430025M13Rik"
                     /codon_start=1
                     /product="zinc finger protein 939"
                     /protein_id="NP_001229950.1"
                     /db_xref="GeneID:233147"
                     /db_xref="MGI:MGI:3036240"
                     /translation="MGSVSFEDIAVDFSWDEWQHLDVAQRTLYRDVMLENYSSLLFLG
                     HCMTKPEVIFQLEHGFGPWPVGDSSVRSFAGIHKVTTSFDTHQENHKGYLWQVEITNS
                     QTSNEKITEADLKVAQKIQQGTASYEDKDVVKAFIQQSQHTRSEMSYSCKKSIQCKSP
                     LSNCQRLLSEETRHTHRQRRKSHLTEQRSHEGEKPCESSGRGKASHTKPQRQATHSDE
                     KPYKCLECGKYFYYKSQVIEHQRSHTGEKPYECTECGKSFSYKSHLTIHHRSHTGEKR
                     HECTECRKVFYYKSQLTRHQRSHTGEKPYECMKCGKSFYCNTHLSLHQRIHVNVKPYA
                     CTECGKTFSFSACLTRHQRIHTNEKPYKCSHCPKAFYFKKQLTHHEKTHATEKRFECK
                     QCGKAFYWRANLTVHQKTHGGEKPFECKQCGKAFYCKSHLTVHQRTHISEKLYQCSQC
                     RKAFYSQTQLTVHQRIHTDEKPYGCKQCDKTFYSKSGLTAHQKTHTGEKPYECKECGK
                     AFYNKYLLIEHHRVHTGEKPYQCTECKKAFYCKKYLSLHQKTHASEKSFHCAECGKAF
                     SWMSHLTQHQRIHTGATARAS"
     exon            137..263
                     /gene="Zfp939"
                     /gene_synonym="9430025M13Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            264..356
                     /gene="Zfp939"
                     /gene_synonym="9430025M13Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            357..466
                     /gene="Zfp939"
                     /gene_synonym="9430025M13Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            467..1874
                     /gene="Zfp939"
                     /gene_synonym="9430025M13Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            1875..1980
                     /gene="Zfp939"
                     /gene_synonym="9430025M13Rik"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 caccaccatc ggggttggga tctgtcaggc gcttctgctt ggtatctgcg attctctgcc
       61 tctttctgtc gtcagtgccc atcgctgctg ggggaagctc cgtaattagg accctggtgt
      121 ccaggaaccg gaaatgggtt ccgtgtcatt tgaggacatt gctgtggact tctcctggga
      181 cgaatggcag catctggatg tggctcagag gactctctac agggacgtga tgctggagaa
      241 ctacagcagt ctcctgttct tgggacattg catgaccaaa cctgaggtga tcttccagtt
      301 ggagcatgga tttgggccat ggcctgtggg agactcctct gtccgcagct ttgcaggtat
      361 tcataaagtg actacctcct ttgacaccca ccaggaaaat cacaagggat atttatggca
      421 agttgaaatc accaacagcc agacttcaaa tgagaaaatt actgaagcag acctgaaagt
      481 ggcacagaag atccaacaag ggacagcatc ctatgaagat aaagatgttg tgaaggcatt
      541 tatccagcag tcacagcaca caaggagtga gatgagttac tcatgtaaga aaagcatcca
      601 atgtaagtcg cctctcagta actgtcagag gcttcttagt gaggagacgc ggcacacaca
      661 cagacagcgc aggaagtcac acctgactga acagagaagt cacgaagggg agaagccatg
      721 tgaaagctca ggacgtggga aagcttccca caccaagcct cagcgtcagg ccactcatag
      781 cgatgagaag ccctacaaat gtctagaatg tgggaaatat ttctactaca agtcacaagt
      841 cattgagcat caaagaagtc atacaggcga gaagccttat gagtgtacag aatgtgggaa
      901 atctttcagc tataaatccc atctcactat acatcacaga agtcacacag gtgagaagcg
      961 tcatgaatgt acagaatgta gaaaagtatt ttactataag tcccaactta ctcgacacca
     1021 gaggagtcat acaggggaga agccctatga atgtatgaaa tgtggaaaat ctttctactg
     1081 taacacacat ctttctttgc accagcgaat tcatgtaaat gtgaaaccct atgcatgtac
     1141 agaatgcggg aaaacgttct ctttcagcgc atgcctcact agacaccaga ggattcatac
     1201 aaatgaaaag ccctataaat gttcacattg ccccaaagct ttttacttta agaaacaact
     1261 tactcatcat gagaaaactc atgctacaga gaagcgcttt gaatgtaaac agtgtggtaa
     1321 agcattttac tggagggcca accttactgt gcatcagaaa acacatggtg gggagaagcc
     1381 ctttgaatgt aaacaatgtg gaaaagcatt ttactgcaag tcccacctca ctgtgcatca
     1441 gagaactcat ataagtgaaa agctctatca atgttcacag tgcaggaaag cattctactc
     1501 tcagacacag cttactgttc atcagagaat tcacactgat gagaagccct atggatgtaa
     1561 gcaatgtgac aaaacattct acagcaagtc tgggcttact gcacatcaga aaactcacac
     1621 gggcgagaag ccctatgaat gtaaagagtg tgggaaagca ttctataaca agtacttgct
     1681 cattgaacat cacagagtgc acacaggtga aaagccctat caatgtacag aatgcaagaa
     1741 agccttctac tgcaaaaaat atctttctct acatcagaaa actcatgcaa gtgagaagtc
     1801 atttcattgt gcagagtgtg ggaaagcttt ctcctggatg tcacacctca ctcagcatca
     1861 gagaattcac acaggggcaa ctgcaagggc ctcctgaaga tggatatcaa ggggcaggag
     1921 atgcatggga ctggggagtg aaattcacaa agactcaata aaggtttttt tggttttttt
//
